Ocom047051.2
Basic Information
- Insect
- Ophraella communa
- Gene Symbol
- Mblk-1
- Assembly
- GCA_035357415.1
- Location
- CM068986.1:28371904-28375092[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-16 3.6e-14 54.6 0.0 1 45 38 83 38 83 0.95 2 2 2.9e-17 6.3e-15 57.0 0.0 1 43 383 426 383 428 0.95
Sequence Information
- Coding Sequence
- ATGCTATCCCTCTGCTGGTTCTGGTCCGATGAGAGACTCATTTGCGCCCTGCTTTGTTCTGATTTCAGAGCGAAACCTAGAATGTCAGCAGTTGCAGGTAGACGAACCTACACCGAGGACGAACTTCAAGCGGCTCTAAGAGATATCCAATCAGGAAAATTGGGCACTAGACGAGCAGCCGTAATTTATGGAATTCCCAGGTCAACGCTACGGAATAAAGTGTATAAGCTGGCTCTGGAAAAAGAGAGGGAATCGCATCTGAATAGTTCTACTCCGATAGAGGAAGAAGCTATGGAAGATGAAAAAGATTTATCTGGAACAGAGGAGGAAAAGGAAGTCGAAAAGGCTTTGGAGGCTCCTTTACTCTCTATTGAAGATCTGTTTAGATTTAGTAGTGGTAGAGAGatcCCAGATACCTTAAAGACACTCCTTCAAAAGGGTGGCTTGGACCAAACAGAAATGCCCTACCTTCAAAATATTTTCCTCGCGTCCCAATCATTGCTTCCCCATAAATCTCCTGACGGTTCAATGGTGTCAAATATGATACCCGAATTAATGAAACGTATAATCACCGAAGACCATCAGTTGCTGAAGATACAAAACAACGGTGCCAATGAGAAACTCATCTCGAGGCCGAGTCCAAGTAACTCGGTGATAACGAAAGGTGAGAGAACTAAATCGGAATCCGATATGGAAACCGAAGATTCTCCTTCAAATGTGATACTTAAAATTCCGTCCTACAAACCGACGACGTCAAATAAAAATGGATGCGATCCCACTAGAAATCAAGTCGAACCTACAGTTGGAAGCATAATCTCACCCCCAGTAACTAGCGAATCCGGATCTCCTCCTATATTACCTTCAAAAGGTCACATAATAAAAGATGTTAAAGATGTTATAGCTCAAAGTATTAGTCAAAAATTTCAACAGTCTATGGAACCGAGGAGGCCAATATTAGATATTGATTTTAAACGGGGAGGATTTACTCCTCCACTAGGTAGTGGAATTTCTGTAATTAAAACTCAACATGACCTGAGTAGACAGTTTCAGCAGCAGCAACAACAACAACCTCTAAAACCACAAAGCAATAGTGCCCCTACTGGTGGaaaagGTACAAGGCCAAAAAGGGGTAAATATCGAAACTACGATCGAGACAGTTTAGTGGAAGCAGTTCGAGCAGTTCAACGGGGTGAAATGTCAGTTCATCGTGCTGGTAGTTACTACGGTGTACCTCATTCTACTCTTGAATACAAAGTAAAAGAAAGACATTTGATGCGGCCTCGTAAACGTGATCCTAAACCAAACCCAGTTGATGAAAAAATTGCTAGTCTCAAACAAAATGATATACGAAATTCCCAAGAAAAACTCAAGCCTATAATGAAGCCTCCTCAGAAGTTTTCGCCGACCTCTCCTAATGGAATAAAGTTGCCATTATTTGAATCTGGAATGGCACCTTTAGCGGGCTATAATGCTCCACCATTTCCATTTTGGGCGCCTCCAGGATTTCCACCTATTTTAGATTACACTAGACCTCCTACATCACCGTTCTCGGGTCCCAACACGGAATTTTTCGCATCACAAATGATGCAAAAACTTCAAGAAGACTCTTCAAGGTCGACACCTCAAACATCATCTGCGCCTCCGCTATCTAAAAACGCTAGACAAAGAGCAGAAGCGTTATTAGATGGCGCTTCGGCAAATGGTTCGTTTCTCGACGGAATAATAAGGTCAAGTCTCGAATCAGGAGTACCTGGCAACGAAGATAAAGCTCTAAATGAAGACAAAAACGTTGCTCCAGAAAACATGTCGAATAAAGCACTGTTGGATCAACTATGTAGAAATAGCAGACTTACACCATTATCCAAACCTACAGCTTTAGATGAACATAGCTCGGAAGATGATACCTGTCGAAAGAGTATAAGTCCTTTAAACTTTGTTACAGGAGAAACGTCACGAGATGAAAACATTGATGATGACTCGTCATCTCGATTTGACAAAGACAGCTCTGAAGTTCACACCATAGAACTTTCGAATGATTCAAATACGTCTAGTGAAAAGAAATTAATAGATGAAGACCAAAAGCAGCCTAGAATTTTCTTAAAACAGGATCTAGTAAAGCCTGAAAATCTTAAACCCGAAATGTTGGTGCGGTTTCGGGAGGTTTTACCGGTCCACAATGGAATGGCGGAAAATAGTGCCTCAGAGACAGACGGGGGACAGGACTGA
- Protein Sequence
- MLSLCWFWSDERLICALLCSDFRAKPRMSAVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALEKERESHLNSSTPIEEEAMEDEKDLSGTEEEKEVEKALEAPLLSIEDLFRFSSGREIPDTLKTLLQKGGLDQTEMPYLQNIFLASQSLLPHKSPDGSMVSNMIPELMKRIITEDHQLLKIQNNGANEKLISRPSPSNSVITKGERTKSESDMETEDSPSNVILKIPSYKPTTSNKNGCDPTRNQVEPTVGSIISPPVTSESGSPPILPSKGHIIKDVKDVIAQSISQKFQQSMEPRRPILDIDFKRGGFTPPLGSGISVIKTQHDLSRQFQQQQQQQPLKPQSNSAPTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDIRNSQEKLKPIMKPPQKFSPTSPNGIKLPLFESGMAPLAGYNAPPFPFWAPPGFPPILDYTRPPTSPFSGPNTEFFASQMMQKLQEDSSRSTPQTSSAPPLSKNARQRAEALLDGASANGSFLDGIIRSSLESGVPGNEDKALNEDKNVAPENMSNKALLDQLCRNSRLTPLSKPTALDEHSSEDDTCRKSISPLNFVTGETSRDENIDDDSSSRFDKDSSEVHTIELSNDSNTSSEKKLIDEDQKQPRIFLKQDLVKPENLKPEMLVRFREVLPVHNGMAENSASETDGGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00436386;
- 90% Identity
- iTF_01105488;
- 80% Identity
- iTF_01105488;