Ocom018134.1
Basic Information
- Insect
- Ophraella communa
- Gene Symbol
- Kdm5
- Assembly
- GCA_035357415.1
- Location
- CM068980.1:22943219-22945736[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.5e-26 7.2e-22 80.0 0.0 2 89 117 200 116 200 0.94
Sequence Information
- Coding Sequence
- ATGACTACTAAGGTGGATAAGCAAATGAATGGTAATATTGGTATTAAAACCCACCCTTGCGGCTCGAAAGTTTcaccaataaaaaataatgaccaCTATTCTCAGTACAAAGAAGAAACTTTTAAATTTGAAGTACCTCCAGAAGCTCCAGTATTTTATCCTACAGAAGAAGAATTTCAAGATCCTCTTGCTTATATAGCAAAAATAAGACCAATCGCCGAAAGTACAGGAATATGTAAAATTAAGCCACCATCACATTGGCAGCCTCCATTTGCAGTTGATGTTGATAAATTAAGATTTACTCCTAGAATCCAAAGATTAAATGAATTggaagcAAAAACTAGAGTAAAACTGAACTTTTTGGATCAAATAGCTAAATTTTGGGAACTGCAAGGTTCTTCGCTTAAAATACCCATGGTAGAAAGAAGAGCTCTAGATTTATATACCCTGCATAGAGTTGTACAAATAGAAgggGGATTTGATAATGTAACAAAAGAGCGAAAGTGGTCTAAAATATCACAAAGGATGGGCTACCAAGTTGGTAAAAGTATAGGAACAATATTAAAAACCCATTATGAGAGACTTCTTTTTCCATTTGATGTTTTCAAAGCTGGAAAAACAGTTGATGtaaaattggaagaaactTCTGATGATATAGAAAAGGCAGATAAAGATTATAAACCACATGGTATTGTTAGCCGCATGCAAATTAAACCGCCACCCGAAAAAAATGCCAGAAGATCTAAAAGATTTGATGTAAATGATGAAAGCAAGACTGAGAACTTAGCACTTAagataaaagaagaaaaatcggAAGATGAAGATTCAGGGAATAAAGAACTGAGAcgtttacaattttatggagCAGGACCAAAAATGGCTGGATATGATGAGAAAAAAGAACCTAAACCTAGACATAAATCTGTGAAATATGATTTTGATCCAGATTAG
- Protein Sequence
- MTTKVDKQMNGNIGIKTHPCGSKVSPIKNNDHYSQYKEETFKFEVPPEAPVFYPTEEEFQDPLAYIAKIRPIAESTGICKIKPPSHWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERRALDLYTLHRVVQIEGGFDNVTKERKWSKISQRMGYQVGKSIGTILKTHYERLLFPFDVFKAGKTVDVKLEETSDDIEKADKDYKPHGIVSRMQIKPPPEKNARRSKRFDVNDESKTENLALKIKEEKSEDEDSGNKELRRLQFYGAGPKMAGYDEKKEPKPRHKSVKYDFDPD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00328938; iTF_00327641;
- 90% Identity
- -
- 80% Identity
- -