Basic Information

Insect: Ophonus ardosiacus
Gene Symbol: -
Assembly: GCA_943138245.1
Location: CALPBP010001241.1:178937-181334[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00096 0.17 14.0 1.4 3 23 370 392 369 392 0.94

2 9 0.0001 0.019 17.0 1.9 1 23 398 422 398 422 0.98

3 9 2.1e-06 0.00039 22.3 0.9 1 23 428 452 428 452 0.98

4 9 1.5 2.7e+02 3.9 1.1 3 23 460 482 458 482 0.88

5 9 0.0012 0.21 13.7 0.1 1 23 489 513 489 513 0.98

6 9 0.002 0.37 12.9 1.5 2 23 521 544 520 544 0.94

7 9 0.00015 0.027 16.5 2.9 1 23 550 574 550 574 0.96

8 9 0.00019 0.034 16.2 2.2 1 23 580 604 580 604 0.98

9 9 0.0013 0.23 13.6 1.9 1 23 610 633 610 633 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00096	0.17	14.0	1.4	3	23	370	392	369	392	0.94
2	9	0.0001	0.019	17.0	1.9	1	23	398	422	398	422	0.98
3	9	2.1e-06	0.00039	22.3	0.9	1	23	428	452	428	452	0.98
4	9	1.5	2.7e+02	3.9	1.1	3	23	460	482	458	482	0.88
5	9	0.0012	0.21	13.7	0.1	1	23	489	513	489	513	0.98
6	9	0.002	0.37	12.9	1.5	2	23	521	544	520	544	0.94
7	9	0.00015	0.027	16.5	2.9	1	23	550	574	550	574	0.96
8	9	0.00019	0.034	16.2	2.2	1	23	580	604	580	604	0.98
9	9	0.0013	0.23	13.6	1.9	1	23	610	633	610	633	0.97

Sequence Information

Coding Sequence: ATGGATGACTGGCTTCCTCAGAAAACTTGCATGGACACTATGGATAGCACTTATTTAAATGATATTAACTTCTTGTCAACAAGAGATCCCGATATGTGTACCTCTGATGTAGGGTTAGAGCTAATACTCGTAAACAACGAGAAAAAACACTTAAACTACGATAAGAATTCTGATCTGGACTACTCAGATCCTCTATTAAATCTTGTACCAATGAATGAAGTATTATTACGTAAGACTGATACTAAATGTGATAATTTACTAGGCGGTAAAGATTTATTTACATCAGACGGAGATGGTAACAAAAACAAACCAGTATGGGATACATTAAGTATCAACAGTCGAAAAAGTGACTGCGATGTCGAAAACAACAGTGATTTTGCTGATTTTAATCTATTATCATTGTCTTTTGATGCTAATGAAAACGAGGACGACCAAGTAGAGACATTAAGTAAGTTTACAAATGAAAACACGTCTATCCAACCATCTGTACCAGATGCTACCATAACAGTAACAACCAATGAACAACCTACAAATATAATTCCAGTAGTATCTCCACCATCATCACCCATACTCAAAACCAAGAAACTCGCGCAAAATAAGAGACCTAACATTTTACGTCCAGCAAAAAGTAAACAATCTTCAGAAACAACTACCACTGACACACAATCAGAAACAAAtgatgaaacaaatgaacaatcAAATCAATATGTGCTTGATTTCACTAATGGGAATACGTTGACGGTACaacgcaaacaaaatattaaccaGATGTTGTTGAGCGATATAACAGGCTCGGTGGCTGTCGTATCTAATGCTGTAGGGAAAACTCGCATTGAATTCCACACATCTCGAGGGTTAGAACAGTATGAAGGAAATACGAGTGATGTGACTGAAGGTACAGGAAGAAGTCGACGACCAAATACCCCTGTAGATGGCGAACACATTGTAACGCAAGTATATACAGCTGCCTCCGTAAATCAGACCACTACAATCACATCTAGTAAAGAACCAGAAGACCGCATCGTTAAAGAAATGTTAGCAATGTTGGGTATTACAGACGATATGCTGTACAATGTCGTTACTAATTTAGGCATGCGAATGTGGCTATGCCCTGAACACGAATGCCGCCGAATTTTTAATCGACTTAGTACACTCAagtctcatattctttctcattACGGCCTTAAGCCTTTTAAATGCGATTTCCCAAATTGTCCCTGGTCTTTCTACACATCTTTTAAACTAAAACGGCACCGAGAAACACATCTAAAAAGAAAAGATTTTACATGTACCGTAGCAGATTGTAACAGAAGTTTTACAACGGTGTATAATTTAAACACACACATGAAATTGCATGAGAGGCCAGCACGGCTTAAGTGTTTGGTGCGGTCGTGTAGTTTGCGTTTTCAAACACGACGTGCTATGGAAATGCATCTTAAGAGTCATGAATTAGCGCTAGCGCCTTATCGTTGTTCGGCAGCCGGTTGTTCTAAGCCCTATTTCTCTCTTGGAGCCTTAACAGCGCACCAACGTGCCCACCAGCACAAAGAAGAAGAGCTGCGTTGCCAATGGGAAAACTGTGGTCGTCTTTTTGATAAACCATGTCGTTTACGGGCACATATGCGTACACATACCGGCGACAAACCATACGTGTGTCGTTTTCAAGATTGCCACTGGGCTTTCGCTTCTTCGAGCAAACTTAAGCGCCATCAATATAAACACAACAATGAGCGTCGTTTTCGTTGCACCATCGGCGATTGCACCAAAGCTTTCATGCGCTCGGAACATCTGCGagaacacacatacacgcacatcGCTCAACGAACTTTTCAGTGCCCAGTTTGCGGGGAAAAATGTTCTGCTAAAGCCACACTGTACGTCCATAAAAAAAAGTTCCATTCCACACCGCCAGCTGATACTAAAATTCATAATACTGACACGGGTACTGATGTTATTGCTAATGTACTAGTACCCACAACTAGCTTTACTCATACTCAACCTATTACGAAACCAAAAGCAGTTAAGAAAACAAAGATTAGTAAAAGCTGTGCGCGTACTTATATGCCATATGTAGAGAAAAATACATCAAAAGTAACGGCAATCATGTTAAATAAAAGCGAAGATGTCTTGCTTTCTGTAGGCAGAGCAACTCCTGTACCAGATTCTGAACAAGCTGTATATTTGAGTAATATGATGCTACAAGATCCAAGTGAATCTTCTGTGACTGTTACGGAAGATGTGTATACAGCAAACGAAGAAGCAGAATTCATTCTTTTGTTTGATTCATCAGCTGACACAACTTTTCCGGGTTCtacagtaaatttaaaagaTCTGGATTAA
Protein Sequence: MDDWLPQKTCMDTMDSTYLNDINFLSTRDPDMCTSDVGLELILVNNEKKHLNYDKNSDLDYSDPLLNLVPMNEVLLRKTDTKCDNLLGGKDLFTSDGDGNKNKPVWDTLSINSRKSDCDVENNSDFADFNLLSLSFDANENEDDQVETLSKFTNENTSIQPSVPDATITVTTNEQPTNIIPVVSPPSSPILKTKKLAQNKRPNILRPAKSKQSSETTTTDTQSETNDETNEQSNQYVLDFTNGNTLTVQRKQNINQMLLSDITGSVAVVSNAVGKTRIEFHTSRGLEQYEGNTSDVTEGTGRSRRPNTPVDGEHIVTQVYTAASVNQTTTITSSKEPEDRIVKEMLAMLGITDDMLYNVVTNLGMRMWLCPEHECRRIFNRLSTLKSHILSHYGLKPFKCDFPNCPWSFYTSFKLKRHRETHLKRKDFTCTVADCNRSFTTVYNLNTHMKLHERPARLKCLVRSCSLRFQTRRAMEMHLKSHELALAPYRCSAAGCSKPYFSLGALTAHQRAHQHKEEELRCQWENCGRLFDKPCRLRAHMRTHTGDKPYVCRFQDCHWAFASSSKLKRHQYKHNNERRFRCTIGDCTKAFMRSEHLREHTYTHIAQRTFQCPVCGEKCSAKATLYVHKKKFHSTPPADTKIHNTDTGTDVIANVLVPTTSFTHTQPITKPKAVKKTKISKSCARTYMPYVEKNTSKVTAIMLNKSEDVLLSVGRATPVPDSEQAVYLSNMMLQDPSESSVTVTEDVYTANEEAEFILLFDSSADTTFPGSTVNLKDLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00769135;
90% Identity: iTF_00767566; iTF_00769135;
80% Identity: -