Basic Information

Insect: Ophonus ardosiacus
Gene Symbol: -
Assembly: GCA_943138245.1
Location: CALPBP010000147.1:651047-659224[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00039 0.071 15.2 1.2 2 23 196 217 196 217 0.97

2 11 1e-05 0.0019 20.1 1.9 1 23 220 242 220 242 0.97

3 11 0.15 27 7.1 4.1 1 23 249 271 249 271 0.82

4 11 2.1e-06 0.00038 22.3 0.2 2 23 278 299 278 299 0.97

5 11 2.3e-06 0.00042 22.2 2.5 1 23 305 327 305 327 0.98

6 11 7.9e-07 0.00014 23.7 3.7 1 23 333 355 333 355 0.98

7 11 9.5e-08 1.7e-05 26.6 0.8 1 23 361 383 361 383 0.99

8 11 1.9e-07 3.4e-05 25.6 0.2 1 23 389 411 389 411 0.98

9 11 1.1e-06 0.0002 23.2 0.9 1 23 417 441 417 441 0.98

10 11 1.5e-07 2.8e-05 25.9 0.7 1 23 447 469 447 469 0.98

11 11 2.4e-05 0.0043 19.0 3.8 1 23 475 497 475 497 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00039	0.071	15.2	1.2	2	23	196	217	196	217	0.97
2	11	1e-05	0.0019	20.1	1.9	1	23	220	242	220	242	0.97
3	11	0.15	27	7.1	4.1	1	23	249	271	249	271	0.82
4	11	2.1e-06	0.00038	22.3	0.2	2	23	278	299	278	299	0.97
5	11	2.3e-06	0.00042	22.2	2.5	1	23	305	327	305	327	0.98
6	11	7.9e-07	0.00014	23.7	3.7	1	23	333	355	333	355	0.98
7	11	9.5e-08	1.7e-05	26.6	0.8	1	23	361	383	361	383	0.99
8	11	1.9e-07	3.4e-05	25.6	0.2	1	23	389	411	389	411	0.98
9	11	1.1e-06	0.0002	23.2	0.9	1	23	417	441	417	441	0.98
10	11	1.5e-07	2.8e-05	25.9	0.7	1	23	447	469	447	469	0.98
11	11	2.4e-05	0.0043	19.0	3.8	1	23	475	497	475	497	0.98

Sequence Information

Coding Sequence: atggataCCCAATTAATAGAAATGCAACAACAAACTTATAATTTAAACTATGGACAAGAAAATACATATTCCTTCGAAAGAATTTGTCGAACTTGTTTAACAGAACGAGGAGAGCTACAGTCTTTATTTAATGACCGAGTAAACGAGATGTTAATGTCATTTACTGCAGTGCAgGTGACGATAAATGATGGCCTGCCAACAAATATTTGCTCGCAATGTGTTTTAAATATTAGTAGGGCATATAGTTTCAAACAACAAGCAGAACATTCGGATACAACGTTAAGacaatatatttttcagaatCAACAAGATCCGGTAGTATCAAATATCTTACACATAAATTATGAGGGAAATAACGTACCTACAGCAGTTGACCAGAATATTATTTCTGGAAAATGCCAGTATTTTCCTCAGGACCAAAATTTACAACCACCCAATCAAAAATTAGAAATTAACAATAAAACATCTATAGAAACAACGAAAACTGAACAATGTAaagacaaaaatattgaaacttTTGAAGAAGATATGAACATAGAAAATGATACTACTGATAGCGAAACTGACGACAACTCTAAAACGAATTATTGTAAAACTTGCTCATTGTCTTTTGACtCTAAAGTAGAATATGAAAAACATGTTAAAACACATAAAAAACACATTTGCAGCGAATGCGGAAAATCATATCAGTATAAAATAGGATTACGAACGCATATGAGATCTCACGGAATTGGAGAGAAGAAACATGAATGTAGTCATTGTGGGAAACGGTTTTATGAACTCAACGATTGCGtgGTTCACGAACGCGCACATACCGGAGACCGTCCAGAAGTGTGCGAGACATGTGGTAAAAGATTTGCGGATCCTAGAAGTTTAgctaaacatttaaaaatacattcagGAGAAAAACTATTTGAATGCGATGtttgccaaaagaaatttaCTCATGCTTATACGTTAACAGCACATAAAAGAATTCATACTGGTGAGAAGCCATTTGTCTGTAATGTTTGCGGACATTCGTGTACAACTTCTTCGCAGCTTACTTTACATATTAGGACACACACTCAGGAGAAACCCTACGTCTGCTCTATATGCTCAAAAGCTTTCACGAGCAAAAGCGGATTAACAACCCACCAAATGACTCATACGGGCGAACGAAAATACATTTGTTCTATATGTGGAAAAGGATCTCGAACTTCAAGTGATCTCAATGCACATTTGCGAACCCATACGGGCGAAAAACCTTATGAATGTAAAATACCTCTTTGTAAAAAGAGATATAAAACCAATAGTCAACTTAGTGCCCATATTAGAACACATACAGgtGAAAAGAACCACAAATGCAATATTTGCGGGAAAGCTTTCGCAGATACATCACAATTAAAAGCTCATACCAATATCCATACAGGGTTAAAACCGTATATTTGTGCAACTTGTGGGCACAGGTTTACTCAGTCTGGATCTTTACATACGCATATGAAAAGCCACCGATGA
Protein Sequence: MDTQLIEMQQQTYNLNYGQENTYSFERICRTCLTERGELQSLFNDRVNEMLMSFTAVQVTINDGLPTNICSQCVLNISRAYSFKQQAEHSDTTLRQYIFQNQQDPVVSNILHINYEGNNVPTAVDQNIISGKCQYFPQDQNLQPPNQKLEINNKTSIETTKTEQCKDKNIETFEEDMNIENDTTDSETDDNSKTNYCKTCSLSFDSKVEYEKHVKTHKKHICSECGKSYQYKIGLRTHMRSHGIGEKKHECSHCGKRFYELNDCVVHERAHTGDRPEVCETCGKRFADPRSLAKHLKIHSGEKLFECDVCQKKFTHAYTLTAHKRIHTGEKPFVCNVCGHSCTTSSQLTLHIRTHTQEKPYVCSICSKAFTSKSGLTTHQMTHTGERKYICSICGKGSRTSSDLNAHLRTHTGEKPYECKIPLCKKRYKTNSQLSAHIRTHTGEKNHKCNICGKAFADTSQLKAHTNIHTGLKPYICATCGHRFTQSGSLHTHMKSHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00767436;
90% Identity: iTF_00767436;
80% Identity: -