Basic Information

Insect: Ophonus ardosiacus
Gene Symbol: -
Assembly: GCA_943138245.1
Location: CALPBP010001453.1:562788-567932[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0022 0.4 12.8 1.3 2 23 126 147 125 147 0.97

2 13 2.3e-05 0.0043 19.0 5.0 1 23 165 187 165 187 0.98

3 13 1.7e-07 3.1e-05 25.7 1.9 1 23 193 215 193 215 0.99

4 13 1.2e-06 0.00022 23.1 6.2 1 23 221 243 221 243 0.98

5 13 7.2e-05 0.013 17.5 0.2 3 23 251 271 249 271 0.95

6 13 0.0036 0.65 12.2 1.7 2 23 278 299 277 299 0.97

7 13 2.1e-06 0.00039 22.3 2.9 1 23 305 327 305 327 0.96

8 13 1.1e-05 0.0021 20.0 3.0 1 23 333 355 333 355 0.99

9 13 0.0013 0.24 13.5 1.7 2 23 362 382 362 382 0.98

10 13 3.3e-05 0.0059 18.6 2.5 1 23 388 410 388 410 0.97

11 13 1.5e-07 2.7e-05 25.9 1.7 1 23 416 438 416 438 0.97

12 13 9.1e-06 0.0017 20.3 2.7 1 23 444 466 444 466 0.97

13 13 7e-07 0.00013 23.8 2.6 1 23 472 495 472 495 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0022	0.4	12.8	1.3	2	23	126	147	125	147	0.97
2	13	2.3e-05	0.0043	19.0	5.0	1	23	165	187	165	187	0.98
3	13	1.7e-07	3.1e-05	25.7	1.9	1	23	193	215	193	215	0.99
4	13	1.2e-06	0.00022	23.1	6.2	1	23	221	243	221	243	0.98
5	13	7.2e-05	0.013	17.5	0.2	3	23	251	271	249	271	0.95
6	13	0.0036	0.65	12.2	1.7	2	23	278	299	277	299	0.97
7	13	2.1e-06	0.00039	22.3	2.9	1	23	305	327	305	327	0.96
8	13	1.1e-05	0.0021	20.0	3.0	1	23	333	355	333	355	0.99
9	13	0.0013	0.24	13.5	1.7	2	23	362	382	362	382	0.98
10	13	3.3e-05	0.0059	18.6	2.5	1	23	388	410	388	410	0.97
11	13	1.5e-07	2.7e-05	25.9	1.7	1	23	416	438	416	438	0.97
12	13	9.1e-06	0.0017	20.3	2.7	1	23	444	466	444	466	0.97
13	13	7e-07	0.00013	23.8	2.6	1	23	472	495	472	495	0.97

Sequence Information

Coding Sequence: atggacAAAGATTTGGATTTTAGCAAAACATGCAGAACATGTTTAACTCAGAATTCAAGTTTATATTTACTTGAAGACTTCTGTAATGAATATGACAAGAGCCTCAGAATATACGAAATGATAATAGAGTGTACCAATGTCAAAATTTCATTACATGATGATTTACCTCAAACAATATGCAACAATTGTGTACAAAacttaaatattatgaaaacatttagaaaaaaatgtgaagagagtgatatatttttaaaacaatataagaCTATTAGATCacaaattgaagaaaataaaacaaatgactGTGAtgaagaaacaaaacaaaatcacCCGAACATAAAAACAGAAACAGATGATGAAACATATGAACCAAAAACATGTGATATATGCCTCAGAACATTCCAAActgatgtattattaaaaagacATCTTAAAAATCATAAGACTGCAAATGATGTTCACGATGAACTGGATGAAATCTTTAATACCAAACATGTTTGTAAACTTTGTAAGAAAACCTTTACTCAAGCTTGTTCTCTTGCTGTTCATATGAAACGACATCGAGGGCAAAAAgattttaaatgtcatttatgtCCAAAAGCCTTTACAACTTCAGGGAGTTTAAACTTGCACATTAAAACCCACACTGGCGAGAAACCATTTGAATGTAGCCaatgtaaaaaatgttttattacgaAAGATAGTTTACGAAAACACCAAAGAAGGCATAGTGGGGAAAGACCTCATCTTTGTTCAGTTTGTGGAAAAGGgttTGGAGCAGCCAGCACACTTATGGTCCACATGAGACTCCATTCGGGACTAAAACCTTTAAAATGCAAAGTTTGTGATTTGCGATTTGCTTCCCATGCTGGTCTTTCATTTCATATGAGAAAACATTCTAGAGAGACTCCATATTTGTGTTCACATTGTGGAAAAGGATTTAAATCGAGTACAGATTTGACTGTACATACAAGGAAACATACTGGAGAATGTCCTTTTAAGTGCGAATTATGCGATAAGCGATTTCGGACGTCATATTTACGAACAGTTCATCAAAGATCTCATACGGGGGAACGACCCGCAAAATGTTACATTTGCAATAAaagTTACTCCCTTGGTCATCTGTCAATCCATGTACGAACTCATTTGAAAGATAAACCACATACTTGCTCAGTTTGTAACAGAAGTTTTAATTTCGCTAGAGATTTGCAAACTCATATGTACGTACATTCTGGACAACGACCTCACGTATGCCCACAATGTGGAAAAGGGTTTAATAGacggaataatttaaataaacatttaaaaatacattctgGGATTAAGCCCCATGTTTGTGAAatatgTAAGTTCGCTTTCAGTACAAacagtgaattaaaaaatcattttcgaTCCCATACTGGCGAAAGACCATATCACTGTAATGATTGTGATAAAAAATTTGCCAGTTCTAGTGGTCTGGCCCGTCACAGAAGAAGGCAACATATTcaaaagaataaaactaaaactaacgAAGTATTCATTGATCAAAGTAACGTTTTGAATTCGCCAGATGatgaattatttgtaaataaaacaactaCAAGTACTGTCATTCAAGATAGTATAATTGTTGAACAGTTTACGATATCAGAAAATTCTATTGTTACCTCCCAAAGCGATAAACTAACGTTTGAAACTCTACAAAATGTTCAAACGGACGTATTGAAATTTGATAACATAGTTCCTATAAGCGAGCCCCAAATTTTGGAAGTTGCTGCGCCAATGTTTGTGACCTTAAATCGACAAAACATGGATGATATTTTTAAGTGA
Protein Sequence: MDKDLDFSKTCRTCLTQNSSLYLLEDFCNEYDKSLRIYEMIIECTNVKISLHDDLPQTICNNCVQNLNIMKTFRKKCEESDIFLKQYKTIRSQIEENKTNDCDEETKQNHPNIKTETDDETYEPKTCDICLRTFQTDVLLKRHLKNHKTANDVHDELDEIFNTKHVCKLCKKTFTQACSLAVHMKRHRGQKDFKCHLCPKAFTTSGSLNLHIKTHTGEKPFECSQCKKCFITKDSLRKHQRRHSGERPHLCSVCGKGFGAASTLMVHMRLHSGLKPLKCKVCDLRFASHAGLSFHMRKHSRETPYLCSHCGKGFKSSTDLTVHTRKHTGECPFKCELCDKRFRTSYLRTVHQRSHTGERPAKCYICNKSYSLGHLSIHVRTHLKDKPHTCSVCNRSFNFARDLQTHMYVHSGQRPHVCPQCGKGFNRRNNLNKHLKIHSGIKPHVCEICKFAFSTNSELKNHFRSHTGERPYHCNDCDKKFASSSGLARHRRRQHIQKNKTKTNEVFIDQSNVLNSPDDELFVNKTTTSTVIQDSIIVEQFTISENSIVTSQSDKLTFETLQNVQTDVLKFDNIVPISEPQILEVAAPMFVTLNRQNMDDIFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -