Basic Information

Insect: Ophonus ardosiacus
Gene Symbol: dynlt2b
Assembly: GCA_943138245.1
Location: CALPBP010002638.1:57623-114338[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0039 0.71 12.0 1.5 2 23 269 290 269 290 0.98

2 15 0.00022 0.041 15.9 3.8 2 23 297 318 296 318 0.97

3 15 6.1e-05 0.011 17.7 5.4 1 23 327 349 327 349 0.97

4 15 2.3e-05 0.0041 19.1 6.4 1 23 420 442 420 442 0.97

5 15 0.0038 0.7 12.1 1.7 3 23 460 481 458 481 0.95

6 15 0.00038 0.069 15.2 8.9 1 23 545 567 545 567 0.96

7 15 0.0011 0.2 13.8 1.9 1 23 573 596 573 596 0.95

8 15 3.3e-06 0.00059 21.7 0.9 1 23 601 623 601 623 0.98

9 15 3.5e-06 0.00064 21.6 3.3 1 23 636 658 636 658 0.97

10 15 6.4e-07 0.00012 24.0 0.4 1 23 665 687 665 687 0.97

11 15 2.9e-05 0.0052 18.7 1.6 3 23 699 719 697 719 0.92

12 15 0.00027 0.05 15.7 4.2 1 23 725 747 725 747 0.99

13 15 1.2e-05 0.0022 20.0 1.8 1 23 753 775 753 775 0.96

14 15 3.2e-07 5.9e-05 24.9 0.3 1 23 781 803 781 803 0.99

15 15 0.00023 0.043 15.9 0.1 1 23 809 833 809 833 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0039	0.71	12.0	1.5	2	23	269	290	269	290	0.98
2	15	0.00022	0.041	15.9	3.8	2	23	297	318	296	318	0.97
3	15	6.1e-05	0.011	17.7	5.4	1	23	327	349	327	349	0.97
4	15	2.3e-05	0.0041	19.1	6.4	1	23	420	442	420	442	0.97
5	15	0.0038	0.7	12.1	1.7	3	23	460	481	458	481	0.95
6	15	0.00038	0.069	15.2	8.9	1	23	545	567	545	567	0.96
7	15	0.0011	0.2	13.8	1.9	1	23	573	596	573	596	0.95
8	15	3.3e-06	0.00059	21.7	0.9	1	23	601	623	601	623	0.98
9	15	3.5e-06	0.00064	21.6	3.3	1	23	636	658	636	658	0.97
10	15	6.4e-07	0.00012	24.0	0.4	1	23	665	687	665	687	0.97
11	15	2.9e-05	0.0052	18.7	1.6	3	23	699	719	697	719	0.92
12	15	0.00027	0.05	15.7	4.2	1	23	725	747	725	747	0.99
13	15	1.2e-05	0.0022	20.0	1.8	1	23	753	775	753	775	0.96
14	15	3.2e-07	5.9e-05	24.9	0.3	1	23	781	803	781	803	0.99
15	15	0.00023	0.043	15.9	0.1	1	23	809	833	809	833	0.92

Sequence Information

Coding Sequence: atgtcactttctgCAGCTGAAGCTGAATCCGAAAGTAGTCTCGGTGCAGCTGTATCTGCAGTAGCAGATTCCGCCACAGAAATAGAAATTCCAGTAGGTGGAGACGACGATGAGATTGAATATATTGAAGAAGAGGAAGAGAAAGTGGTAAAAGAAAGATTATCTGAAACTATTGAACCAAATACGTATAATGTCAAGCCACAATTGCAAGATAAATTTAAGACGCTGTTTGTTAAACAAGTAATGCAAGAAGTTTTAACGGAAGAACTGACGGGGAAGGAATACACTGCTGAACTTGCTAGGGAGTGGACGACGAATATTGCCAATATTATCAACAGAAAAGTAAAAGATATGAAATGGAAACGGTATAAGCATATAGTACAAATTATAATCGGCGAACAGAGAGGGGCCGGCCTGAAAAGCGGAGTAAAGTGTGTTTGGGACTCAGATACTGACAATTTTACCAGTGAAGTTTTtacaaatGTCGTATCAGGAGACGGTTTACCCGGCCTCATATGCCCAAAATGCGAAGAGCACCTAAACATCGCATACGTATTCAAGCAACAATGCGAACGTACAGACGCCACCCTCCGAGAATACACCAATCACACAACCGGTCAAATTAAAGAGGAATCCGAATCGTTAGATATAGTTGTAAAGCCCGACATAGAAGACGTACTAGAAATATACGATAACGATAATGACGGCGGGAGAGATGACGACGACCCGTACTCTGGATCTGAGAGTGTACATAGTAATTATTCGACGACTGTACGGAGAAAAAAGAAGCAGCAGAAAAGTCGACAGTGTCGGTTTTGTAGTAAGGTGTTGTCAACGAAAGAGGGACTCAGGTTGCATGAGAGGCGCCACACTGgtGAGAAGTTAAAAACGTGTCCAGTCTGCCACTCAACATTCGCCAAATCCAACCACCTAATCCGCCACATGTCTATGCACAACAAACCCACCGACGAATACAAACACACTTGCGAGGAATGCGGCATGGGCTTCACAAAAGCCTCCCACCTGCACAAGCACCGGCGCGAGCACAAGGCCGCCGCGCGGGAGCGAGAAGAAGAGGCGGAAGCCGGGGGCGAAGCGCCCGCTGAAGGAGACGCGGATATGGGCGGTGCGGAGCAGCGGGAAGAACAACCGGTGGCTGTTAAGAGTGAAGTGGATAGTGGTGATGAAGTGCAAGGGGCGGGGTGCTCCACGAGGGGGAAATTGAGGCCTAAGAAGGAGCCGGTGGAAGAGAAGGTTCATTCGTGTAAGATATGTTTGAAAACATTCAACAAATCATCCCACCTAAGCCGACACATGCTAACACACGGTgttgaaaagaaagaaaaacaaGAACCAAAAGAGAAGAAATACATGGCGTGCGAGTTCTGCGACAGAAAGTTCGTATATCGCAAGAGTTTTCTTCATCATATCCAGCTCGAACACCAAATCTCAGAGGATAGTGATACACCGCTCAGCGAATATGCCACCATTGTTACAAAGACCAAGGACCCCAACACTTCCGGCAACGCGGAGAACGGTGGCGAAGGCGTCGTAGGGGGCGACCCCAACCGCCAACTAAACCCCGAAGACGACTTCGAAGAATTCATGCGCCAAGAAGAAGCCAAAAAACTCCACGTCTGCCACGTTTGCAACCACAAATTCACCCGCGCGAACCACCTCACTCGTCACATGACTCTCCATCGCGCCGTACTCATCCACAAATGCGACCGATGCGAAAAGGCCTTCATGACCGCAGAACACCTCGCCACACACGTGCAAGAATACCACGTTGACAGACCGTACGTTTGCTCCTTGTGCAACAAACCATTCAGCCGAGGAGAACACTTAATCCGACACTTAAAAGTCCACGATAAAGACAGCGGAAACGGAAATGGTCCGGATGAGCATAAATGTtcgatttgtgaaaaagttttcGCTAGGAGTGATCATCTAGCGAGACATACGAAGCTGCATTTAGCCCAAGATAAACGACATGTTTGTGGTGAATGCGGCAAGGCGTTTAACCGGTTAGATAATTTGAGAACACATGCAAGAATACATACAGGCGTTCGAGACCCGCAACGATTACATCTATGTATTTATTGCGGCaaagaatttaataattcaaGCAATATGATTGTCCACATGCGGAGACATACCGGCGAACGTCCCTACAAATGCGGGCAATGCGGAAAAGGATTCCCCCGATCGCACGATTTGAAATGCCATGAAAGAACGCATAGTGGGGAAAAGCCCTATTTGTGTACATTATGTGGAAAGAGTttcaataaaagtaataaaCTGTTGCGGCATACTCGTGTCCATACAGGGGAAAGACCGTATGTGTGTTCGTTATGCGGACGGGCGTTCACGCAGTCGAATGATTTGGCGCTGCACATGCGCAGACATACCGGAAGTAGGCCCTATGCGTGTGGGATGTGTCCGGCGAGGTTTATCCAATCAGGTCAGCTGAAAGCTCACCGTCGAAGTCAAGGTCATTGGCTGGAAACCCAACCCGAATTGAAAGGCGCCCACCGAGTAACACCCGTTACTCCCCTAGTAAACCCCCCGcctataaaattcaaaacaagAGTGCAGAGGATCAAAGAAGAGCCTACAATTTTAGGCCACACCATAGGCGTCGGAGTCGGAGTCAACCTAGTAGGCGTCGTGGCCGCCGCCGCCGCCGCCGCTGCTGCAGCCGCTGCGAAAGAGCAAGAAATGCCCAACCAAAATGTTGTCTACGCCACGAAAGAAGAAACTGTGCATAATTTCAGTGTGACGAATCTGTCGAGGGATCCGACACCAAATGCGCAGAGTTTTGTACAACCGCAAGAACCGGGGACTTCGTTCTCTAATAGTATAGCGATGACTTCTAATTCGTTTGCAGTGAGTAGTGAAGGGTATACCTACCAAACGTACGGCTAG
Protein Sequence: MSLSAAEAESESSLGAAVSAVADSATEIEIPVGGDDDEIEYIEEEEEKVVKERLSETIEPNTYNVKPQLQDKFKTLFVKQVMQEVLTEELTGKEYTAELAREWTTNIANIINRKVKDMKWKRYKHIVQIIIGEQRGAGLKSGVKCVWDSDTDNFTSEVFTNVVSGDGLPGLICPKCEEHLNIAYVFKQQCERTDATLREYTNHTTGQIKEESESLDIVVKPDIEDVLEIYDNDNDGGRDDDDPYSGSESVHSNYSTTVRRKKKQQKSRQCRFCSKVLSTKEGLRLHERRHTGEKLKTCPVCHSTFAKSNHLIRHMSMHNKPTDEYKHTCEECGMGFTKASHLHKHRREHKAAAREREEEAEAGGEAPAEGDADMGGAEQREEQPVAVKSEVDSGDEVQGAGCSTRGKLRPKKEPVEEKVHSCKICLKTFNKSSHLSRHMLTHGVEKKEKQEPKEKKYMACEFCDRKFVYRKSFLHHIQLEHQISEDSDTPLSEYATIVTKTKDPNTSGNAENGGEGVVGGDPNRQLNPEDDFEEFMRQEEAKKLHVCHVCNHKFTRANHLTRHMTLHRAVLIHKCDRCEKAFMTAEHLATHVQEYHVDRPYVCSLCNKPFSRGEHLIRHLKVHDKDSGNGNGPDEHKCSICEKVFARSDHLARHTKLHLAQDKRHVCGECGKAFNRLDNLRTHARIHTGVRDPQRLHLCIYCGKEFNNSSNMIVHMRRHTGERPYKCGQCGKGFPRSHDLKCHERTHSGEKPYLCTLCGKSFNKSNKLLRHTRVHTGERPYVCSLCGRAFTQSNDLALHMRRHTGSRPYACGMCPARFIQSGQLKAHRRSQGHWLETQPELKGAHRVTPVTPLVNPPPIKFKTRVQRIKEEPTILGHTIGVGVGVNLVGVVAAAAAAAAAAAAKEQEMPNQNVVYATKEETVHNFSVTNLSRDPTPNAQSFVQPQEPGTSFSNSIAMTSNSFAVSSEGYTYQTYG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00769012;
90% Identity: iTF_00769012;
80% Identity: -