Basic Information

Insect: Ophonus ardosiacus
Gene Symbol: -
Assembly: GCA_943138245.1
Location: CALPBP010000051.1:508504-525643[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.12 21 7.4 0.9 2 23 180 202 180 202 0.93

2 13 8.6e-07 0.00016 23.5 4.1 1 23 233 255 233 255 0.98

3 13 0.00015 0.027 16.5 3.1 1 23 261 283 261 283 0.98

4 13 8.7e-08 1.6e-05 26.7 1.0 1 23 289 311 289 311 0.98

5 13 0.00034 0.062 15.4 3.0 1 22 317 338 317 341 0.91

6 13 1.1e-07 2e-05 26.3 0.7 3 23 409 429 408 429 0.99

7 13 2.9e-07 5.3e-05 25.0 1.4 1 23 435 457 435 457 0.99

8 13 1e-05 0.0019 20.1 1.6 1 23 463 485 463 485 0.97

9 13 1.7e-05 0.003 19.5 2.8 2 23 491 512 491 512 0.98

10 13 1.9e-06 0.00035 22.4 0.6 1 23 518 540 518 540 0.96

11 13 7.1e-07 0.00013 23.8 2.7 1 23 546 568 546 568 0.99

12 13 1.9e-05 0.0035 19.3 3.1 1 23 574 596 574 596 0.98

13 13 0.00016 0.03 16.4 2.4 1 23 607 630 607 630 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.12	21	7.4	0.9	2	23	180	202	180	202	0.93
2	13	8.6e-07	0.00016	23.5	4.1	1	23	233	255	233	255	0.98
3	13	0.00015	0.027	16.5	3.1	1	23	261	283	261	283	0.98
4	13	8.7e-08	1.6e-05	26.7	1.0	1	23	289	311	289	311	0.98
5	13	0.00034	0.062	15.4	3.0	1	22	317	338	317	341	0.91
6	13	1.1e-07	2e-05	26.3	0.7	3	23	409	429	408	429	0.99
7	13	2.9e-07	5.3e-05	25.0	1.4	1	23	435	457	435	457	0.99
8	13	1e-05	0.0019	20.1	1.6	1	23	463	485	463	485	0.97
9	13	1.7e-05	0.003	19.5	2.8	2	23	491	512	491	512	0.98
10	13	1.9e-06	0.00035	22.4	0.6	1	23	518	540	518	540	0.96
11	13	7.1e-07	0.00013	23.8	2.7	1	23	546	568	546	568	0.99
12	13	1.9e-05	0.0035	19.3	3.1	1	23	574	596	574	596	0.98
13	13	0.00016	0.03	16.4	2.4	1	23	607	630	607	630	0.97

Sequence Information

Coding Sequence: ATGAGCAACACTAGTTTAACTGATTTAGGCTTAGGAAAAGTGTGTAGAGCTTGTTTATCAGACGAAGGTGAGATGAAATCTGTTTTCAGTGACAGTTCCGATAGCCcagaaatacaaatatttaaaatgtttgaatgTTGCGCTTCCTTGGAGATTAGTGAAAATGATGGTCTACCAGCAGTAATTTGTATACAATGTGAATTAAGGTTAAACAGTGCTTATAATTTCCGAGAGCTGTGTCAGAGGTCCAATATTACTTTAaggaaatatattgaaaatgctATGCGATATACTGTTAAAAACGAAACAACTTCTGAAGTAAAATACATAATAGAACATATACCACCACTTCAGACAGAGTGTATAGCCGAAATATCAGAACCAGTTGATGATAATTctggtaatgatgatataattAATGATGATGATCTGGATGATCAACCATtactgaaaattaataaaactactaCTGGTTATCCCGATGAAATAATTGTACAAACTATAGAGAATAATAAGAAAAAGTTTAACGaaaaaagagagtgtagaatTTGTGGGTTCATTTCTTCCAATTCTAGGGGACTATCGCTACATATTTCTCATTTTCACAAagATTTGAAGGAACGATGGTGCAAAGTATGTTCCGAAGAAGTCGACGACTTAGCAACCCACTCAAAAGAACACGACAAAGTGCGATCATTTTCTTGCACATTTTGCACAAAAACGTTTTCCTCTCAAGGGCATTTAACAGAGCACATTAGGACCCATTCTTTGGAGCGACCGTTTAAATGCAAAGACTGCAATAAAGGGTTTTTATCTTCGAGACATTTAAAGGTTCATGAAAGGGTTCATTCTGGTGAAAAACCCTACAATTGCCCACATTGTGGGAGAGGGTTTACCCAAAAAGGGTCATTGCAGGGACATATAAGAACCCATACAGGGTTTAAACCATATAAATGTGAGGTCTGTGATAAGCATTGTACCACTTCAAGTGCGTTAGCTTTACATCGAACTAAAACGGGTCACAACAATTTTACTAAGTTAAAAACTCCTCCAGAATTCGAACAAGTTATGATAGTTGAACAAGTTGTAGATGGACAAATTGTAGACGGACAAATAGAAATTGATAATAATGCGGCACAGATCAAGATCGAAGTTAGTTCCCATCCATCATCCACTGACTTGCCCACAAGTTCAAAAGACGAACCCCCTCCGATACGTAAACTCTGCACCGTATGCGGTAAAACATTTTCTACCGCTAGCAAACTGCGTTTACATATGCGTGTACATACTGGCGAAACCCCTTATAAATGTCAATACTGTGAAAAACGTTTTTCAACGCGTGGTCAGCTGGTTGTTCATGTCCGAACCCACACTGGAGAACGACCCCATGTGTGCCATGTTTGCGGAAAAGGGTTCGCGCAGTCCAGTGTGTTAAATACGCATTTGAAATTGCATACAGGCAGGCCGGAACAGTGTCAGGTTTGTCAGCAGAGGTTTTGCAGGCCGGCTGAACTCAGACTGCATATGAGAAAGCATACTGGAGAAAAACCTTATCTTTGCACCGAATGTGGTCAGGCATTCATCCAGCGTTCTCACCTAATGGAGCATATAAAAATCCACAGTGACGAACGTCCGTACAAATGCCATTTATGCGAACGCGCATTCAAACAATCCTCCTCTCTCAAATCCCACATTCAAATCCACACGGGTTTCAAGCCCTACAAATGTTCTCAATGCCCTTACGCTTGCCGACAACCGTACTCTCTTACTCAGCATATGAAGCAACATAGCCAAGATGCACCACAAGCTCATAGACCTCACGTGtgtttgatatgtcacaaagcGTTTACAACGATGGCTATGTTGACAAGTCATTCGAGAACGGTGCACCAAGCGGTTTTTGCAAAAGTCCACCCCCTACAGTTATACGAAGCCTGGCCAGGTTGCTGTAGACGGGTGGATGGGCAGCGGGTACGCGGAGTAGCGCCGATAAGAAGGGGGAATTGTAAACCTGCCTACCTAGAGGGCCCTAGTGCACGTTCCACCCCCCTAAGTAGGGAGCGTAGTAAGACTTACTTCCGAAACAGGGGGTGGTTCGTGAAGAAGAAGAGCCTAGCAGCCGTCCACCAGGCAGCGGCGGAAAGTGGGTTGAAGAGGTGGCATGACGCATCCAAGCTAGCAAGAAACGTAGCTTGGCCagGTTTATTCCACTACGAGTACGGAGTTGGGACCGAGGGTTTCGCCCCAACGGGCCTCCGCTCCAGAAGTCCAGCCCCATGCCAATAG
Protein Sequence: MSNTSLTDLGLGKVCRACLSDEGEMKSVFSDSSDSPEIQIFKMFECCASLEISENDGLPAVICIQCELRLNSAYNFRELCQRSNITLRKYIENAMRYTVKNETTSEVKYIIEHIPPLQTECIAEISEPVDDNSGNDDIINDDDLDDQPLLKINKTTTGYPDEIIVQTIENNKKKFNEKRECRICGFISSNSRGLSLHISHFHKDLKERWCKVCSEEVDDLATHSKEHDKVRSFSCTFCTKTFSSQGHLTEHIRTHSLERPFKCKDCNKGFLSSRHLKVHERVHSGEKPYNCPHCGRGFTQKGSLQGHIRTHTGFKPYKCEVCDKHCTTSSALALHRTKTGHNNFTKLKTPPEFEQVMIVEQVVDGQIVDGQIEIDNNAAQIKIEVSSHPSSTDLPTSSKDEPPPIRKLCTVCGKTFSTASKLRLHMRVHTGETPYKCQYCEKRFSTRGQLVVHVRTHTGERPHVCHVCGKGFAQSSVLNTHLKLHTGRPEQCQVCQQRFCRPAELRLHMRKHTGEKPYLCTECGQAFIQRSHLMEHIKIHSDERPYKCHLCERAFKQSSSLKSHIQIHTGFKPYKCSQCPYACRQPYSLTQHMKQHSQDAPQAHRPHVCLICHKAFTTMAMLTSHSRTVHQAVFAKVHPLQLYEAWPGCCRRVDGQRVRGVAPIRRGNCKPAYLEGPSARSTPLSRERSKTYFRNRGWFVKKKSLAAVHQAAAESGLKRWHDASKLARNVAWPGLFHYEYGVGTEGFAPTGLRSRSPAPCQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00769008;
90% Identity: iTF_00769008;
80% Identity: -