Basic Information

Insect: Ophonus ardosiacus
Gene Symbol: -
Assembly: GCA_943138245.1
Location: CALPBP010001330.1:134733-138287[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00018 0.032 16.3 1.1 2 23 94 115 94 115 0.97

2 16 4.1e-05 0.0075 18.3 4.4 1 23 120 142 120 142 0.98

3 16 3e-06 0.00054 21.9 1.8 1 23 149 171 149 171 0.98

4 16 3.7e-07 6.8e-05 24.7 0.8 2 23 195 216 194 216 0.98

5 16 0.00035 0.064 15.3 5.1 1 23 221 243 221 243 0.97

6 16 0.00071 0.13 14.4 1.2 1 23 249 271 249 271 0.98

7 16 1.2e-05 0.0022 19.9 0.7 1 23 282 304 282 304 0.97

8 16 2.2e-06 0.0004 22.3 3.2 1 23 310 332 310 332 0.98

9 16 0.0001 0.019 17.0 1.4 1 23 341 363 341 363 0.98

10 16 8.2e-06 0.0015 20.5 1.2 1 23 369 391 369 391 0.98

11 16 2.2e-06 0.00041 22.2 1.9 1 23 885 907 885 907 0.98

12 16 0.041 7.4 8.8 4.1 1 23 913 935 913 935 0.98

13 16 0.00031 0.057 15.5 2.8 1 23 946 968 946 968 0.98

14 16 0.00095 0.17 14.0 7.5 1 23 974 997 974 997 0.97

15 16 0.16 28 7.0 9.7 1 23 1004 1026 1004 1026 0.97

16 16 3.6e-06 0.00066 21.6 1.0 1 23 1032 1054 1032 1054 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00018	0.032	16.3	1.1	2	23	94	115	94	115	0.97
2	16	4.1e-05	0.0075	18.3	4.4	1	23	120	142	120	142	0.98
3	16	3e-06	0.00054	21.9	1.8	1	23	149	171	149	171	0.98
4	16	3.7e-07	6.8e-05	24.7	0.8	2	23	195	216	194	216	0.98
5	16	0.00035	0.064	15.3	5.1	1	23	221	243	221	243	0.97
6	16	0.00071	0.13	14.4	1.2	1	23	249	271	249	271	0.98
7	16	1.2e-05	0.0022	19.9	0.7	1	23	282	304	282	304	0.97
8	16	2.2e-06	0.0004	22.3	3.2	1	23	310	332	310	332	0.98
9	16	0.0001	0.019	17.0	1.4	1	23	341	363	341	363	0.98
10	16	8.2e-06	0.0015	20.5	1.2	1	23	369	391	369	391	0.98
11	16	2.2e-06	0.00041	22.2	1.9	1	23	885	907	885	907	0.98
12	16	0.041	7.4	8.8	4.1	1	23	913	935	913	935	0.98
13	16	0.00031	0.057	15.5	2.8	1	23	946	968	946	968	0.98
14	16	0.00095	0.17	14.0	7.5	1	23	974	997	974	997	0.97
15	16	0.16	28	7.0	9.7	1	23	1004	1026	1004	1026	0.97
16	16	3.6e-06	0.00066	21.6	1.0	1	23	1032	1054	1032	1054	0.98

Sequence Information

Coding Sequence: ATGGTCAACAGTAACAGTTTGACAgtagaaacaaatatggaggacATTTTCGTTAAAGAAGAGGATCAAGAGACACCCTATGAACATGAACTCAATGAAAGTGTAGTGCAACGTGCAGCGAAAACAGAATGCGAAGAGAATATAGTATTAAGAGCAAGTAATCATGGGTTTGAAGAAATTCTTATTAAAGAACAACCGGAAACTGAAGATAGCAAcaatcagattgaggaaaagtgtaatgaagaagAAAACTCCGTGATCACTGAGGAGAAAAACAGACGATGTCCAAAGTGTGGTAAAATATTTTCAGGGGTTGGTAATatgaaaaaacattttaaaaaacattcAGGAAAAGATTATCattgtaatatttgtaataagtcGTTTACAGAAAAATTTAGTCTGAAATATCATATGACAATTCATActggtaaaaaagaaaaatttgagTGTTCCATTTGTCGTAAGGCGTACACGAAAAAAAGCTCACTGACAAATCATTTAAATACTCATGTAATGAGCAGCACTGAAGCAACGAAGAAAAACAATACAACTCGCAGTAGTCAGGATGAAGAAAAAAGTCAGTGTCCTATTTGCGGTAAAATATTTTCACGGCTTGGTAATATGAAAAAACACTTAAAAAAACATTCAGGAAAAGGTTTTCattgtaatatttgtaataaatcgtATACAGAAAAATTTAGTCTAAAATATCACATGACTAGTCATGTTGGTAAAAAAGAATTTGAGTGTGATATATGTCACCAGTTATTCCCAAATAATAACACCCTAGAGTACCACTTAAACTCTCATGTTGGTAGTGGTTGCAACAAAACAAAGGTTTATCAATGTAGTCTGTGTAACAAACCATTTATGCGTAAAGATAGTTTGGAATATCATATGAGTGCACATAATGGTATAAAACAATTTCAATGTCCGACATGTCATAAGTCATTTATAAAGAAAAGCACCTTGACTAAACATTTAGATGTTCATAAAGTGAGTGATCAGAAACAAGTATATAAGTGCACTATTTGTAATAAaccaattaaatataaaaaatctttggAATATCATATGAAGGCCCATAAAGGTATAAAAGAATTTGAGTGCCCGAAATGTGATAAGTCATTtgcggtgaaaaaattcctgtcTAGACATTTAAAATTGCATTCATTGGATGGTCAGACACTTACTTACAATCAGATACACGCAGTTGGCACTGACTCGTCGAAAGACAATAGTTTGACAAAGGAAACAAGTAAAAACattgaagatatttttattaaagaagacCAGTGTGAAGAAACTCCTTATGAACATGATAAtactgtaataataaaaataagtaatagtaAATTTGAAGAAACTCTCATTGTAGAACAACCGAAAGACGGCTACATGGGTTTTGAAGAATACAACAATCATTACGAGAAAAAATGTAATGAAGAAGTCAAAATCACACAATGTATACTCGATACTAgtcaaaactgttttaaatctAATCAAATCGATACTGAGTACATTTCGGAAGAAGATTGTAGAtttgaagaaatttttattgaagaacAACCTGTAAAAGGCGACTATATGGACTTGTACGATTGCAATAAtcaaattgagaaaaaatttaatgaagttgtgcctatttgtaatatatttacaCAAGAGCtatacaaacatttaaaaatgGATACATTGAGTGATCAGAATCTTAAATACAATCAGGTACATACAGATAGCACTAATATGGCGTACGAATGCAGTACAATTgtagaaacaaataataaaaatatggaagACATTTTTATCAAAGAAGAACTGTTCGAAAAAACTCCCTCTGAACATCAACTTTATAAAAGTGTAAAAATCGACATAGAACATATTTCAGAAGAAGAGAATTGTAAATTTGAAGAAACTGTCATTGAAGAAAATCCGATGAAAGGCAACTATATGGACTTTGAAGATTACAATAACCAGCAAGAAAAACCATGTAATGATAAAGTGCAAATCACAAATACATTTAAGGATAAGAAAAGAGGTTTGTGCCTAAATTTAACAACGCATATATCGAATAATCTTATTTACAATTCGGTGCACACAGATAGCACTAACAATGagattttagaaacaaataaaaatatggaaaaaatttCTGTCAAACAAGAGCATGAACTTGATAAAAGTATAGAGCAAATTGCAACAAACATGAATATAGAACATACATTGGAAGAAAAGAATATTGTATCGGCAGCGTGTAGTAAAAAAATTGAAGGAACTCTTATTAAAGAACAATTGATGGACTGTGAAGATTACAATAATCCAAACCAGAAAAAATGTAATGAAGTGCAAATCCCACAATGTGTACTCAATCCTGGTGTAAACTCTTGTAAAACTCTTCAAATCGGTACAGAAAATATTATGGAAGAAGATACTATAGTACCGGAAACATGtaaagataaatttgaaaaaattcttattagaGAACAACCGCTGAAATACAACTACATGGACTCAGttgattacaaaaatcaaaataaggaaaaatgtAATGGAAAAGAAAGCTCCGAAATCTCTGAAGAGAAAAAAAGACAATTTGCATTGTCTGGTATGATAATACTTTTAAGTAATACACATACTGAGATCGAAGATTTTCGttgtaatttatgtaataaatcgtttgcaAAGAAAATCAACCTAAAATATCACATGGCAACTCATATTGGCAAAAAAGAATTTGAGTGCGATATATGTCAccagttatttccaaataataaTACCCTAAAGTGTCATTTAAACACTCATGTTGGTAGAGATGGTAGTACATCAATGGATTATCAATGTAGTCTGTGTCTCAAATTATTTAAACGAAAACGTAGTTTAAAATATCATATGAATGCTCATAATGGTATAAAACAATTCCAATGCACAACGTGTCATAAGTCGTTTGGAAAGAAATGTACCCTGACtagacatttaaaaaatgttcataaattgAGCGATCAGGAACATATTTGCACTCTTTGTAAAAAACCTTTTAAACATAGAAAAAGTTTTGAATGTCATATGAAGACTCATAGAGGTATAAAAGATTTTGAGTGCCCGAAATGTGATAAGACGTTTGCCGTAAAACAATACCTATCTAGACATTTAAAATTGCATTCATTGAATGATCAGACACTTATTTACAATCAGATGCACGCAGATAGCACTGACTCATTGAAGGACAATAGTTTGACAGtggaaacaaatattaaaaacattgaaGACATTTTTGTTAAAGAAGGCCAGTGTGAAGAACCTCCTTCTGAACATAAGCTATATAAAACTATATTATCggaagaaagtaataataaatttgaagaagttTTCATTAAAGAAGAACAGAAGAAAGAGAGCTACATGAAATCTGAAGATTACAACAATCAGAAAGAGAAACAATGTAATGATAAAGTTCAAATCACAAATACATTTGAGGATAAGAAAGGTGACATGTACCCACATTTAAAAACTCATAACCTTATGTATAGTAGTATTGTGCAGCAGAGAATGTGA
Protein Sequence: MVNSNSLTVETNMEDIFVKEEDQETPYEHELNESVVQRAAKTECEENIVLRASNHGFEEILIKEQPETEDSNNQIEEKCNEEENSVITEEKNRRCPKCGKIFSGVGNMKKHFKKHSGKDYHCNICNKSFTEKFSLKYHMTIHTGKKEKFECSICRKAYTKKSSLTNHLNTHVMSSTEATKKNNTTRSSQDEEKSQCPICGKIFSRLGNMKKHLKKHSGKGFHCNICNKSYTEKFSLKYHMTSHVGKKEFECDICHQLFPNNNTLEYHLNSHVGSGCNKTKVYQCSLCNKPFMRKDSLEYHMSAHNGIKQFQCPTCHKSFIKKSTLTKHLDVHKVSDQKQVYKCTICNKPIKYKKSLEYHMKAHKGIKEFECPKCDKSFAVKKFLSRHLKLHSLDGQTLTYNQIHAVGTDSSKDNSLTKETSKNIEDIFIKEDQCEETPYEHDNTVIIKISNSKFEETLIVEQPKDGYMGFEEYNNHYEKKCNEEVKITQCILDTSQNCFKSNQIDTEYISEEDCRFEEIFIEEQPVKGDYMDLYDCNNQIEKKFNEVVPICNIFTQELYKHLKMDTLSDQNLKYNQVHTDSTNMAYECSTIVETNNKNMEDIFIKEELFEKTPSEHQLYKSVKIDIEHISEEENCKFEETVIEENPMKGNYMDFEDYNNQQEKPCNDKVQITNTFKDKKRGLCLNLTTHISNNLIYNSVHTDSTNNEILETNKNMEKISVKQEHELDKSIEQIATNMNIEHTLEEKNIVSAACSKKIEGTLIKEQLMDCEDYNNPNQKKCNEVQIPQCVLNPGVNSCKTLQIGTENIMEEDTIVPETCKDKFEKILIREQPLKYNYMDSVDYKNQNKEKCNGKESSEISEEKKRQFALSGMIILLSNTHTEIEDFRCNLCNKSFAKKINLKYHMATHIGKKEFECDICHQLFPNNNTLKCHLNTHVGRDGSTSMDYQCSLCLKLFKRKRSLKYHMNAHNGIKQFQCTTCHKSFGKKCTLTRHLKNVHKLSDQEHICTLCKKPFKHRKSFECHMKTHRGIKDFECPKCDKTFAVKQYLSRHLKLHSLNDQTLIYNQMHADSTDSLKDNSLTVETNIKNIEDIFVKEGQCEEPPSEHKLYKTILSEESNNKFEEVFIKEEQKKESYMKSEDYNNQKEKQCNDKVQITNTFEDKKGDMYPHLKTHNLMYSSIVQQRM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -