Basic Information

Insect: Ophonus ardosiacus
Gene Symbol: -
Assembly: GCA_943138245.1
Location: CALPBP010000505.1:36173-47061[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00016 0.029 16.4 0.6 1 20 157 176 157 179 0.95

2 12 9.3e-05 0.017 17.1 0.3 2 23 186 207 185 207 0.97

3 12 7.7e-07 0.00014 23.7 0.7 1 23 213 235 213 235 0.98

4 12 0.00013 0.024 16.7 0.5 3 23 243 263 241 263 0.96

5 12 6.2e-07 0.00011 24.0 0.9 2 23 270 291 269 291 0.97

6 12 1.3e-05 0.0023 19.9 3.3 1 23 297 319 297 319 0.99

7 12 5.3e-06 0.00098 21.0 2.1 1 23 325 347 325 347 0.96

8 12 7.3e-09 1.3e-06 30.0 0.3 1 23 353 375 353 375 0.99

9 12 6.6e-07 0.00012 23.9 0.3 1 23 381 403 381 403 0.98

10 12 5.8e-05 0.011 17.8 1.5 3 23 411 431 409 431 0.98

11 12 8e-07 0.00015 23.6 1.8 1 23 437 459 437 459 0.98

12 12 7e-06 0.0013 20.7 0.4 1 23 465 487 465 487 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00016	0.029	16.4	0.6	1	20	157	176	157	179	0.95
2	12	9.3e-05	0.017	17.1	0.3	2	23	186	207	185	207	0.97
3	12	7.7e-07	0.00014	23.7	0.7	1	23	213	235	213	235	0.98
4	12	0.00013	0.024	16.7	0.5	3	23	243	263	241	263	0.96
5	12	6.2e-07	0.00011	24.0	0.9	2	23	270	291	269	291	0.97
6	12	1.3e-05	0.0023	19.9	3.3	1	23	297	319	297	319	0.99
7	12	5.3e-06	0.00098	21.0	2.1	1	23	325	347	325	347	0.96
8	12	7.3e-09	1.3e-06	30.0	0.3	1	23	353	375	353	375	0.99
9	12	6.6e-07	0.00012	23.9	0.3	1	23	381	403	381	403	0.98
10	12	5.8e-05	0.011	17.8	1.5	3	23	411	431	409	431	0.98
11	12	8e-07	0.00015	23.6	1.8	1	23	437	459	437	459	0.98
12	12	7e-06	0.0013	20.7	0.4	1	23	465	487	465	487	0.98

Sequence Information

Coding Sequence: ATGGAAGAaggaattatattaaatattgataaagTTTGCCGTTCTTGTTTAATGGAAAAAACTGAAATGCGATCATTATATGAAGAACAAATTACAACCATGTATTCGTATTGTACTTCTGTATCTATAATGTCAAATGATGGAATGCCTATGTTACTTTGTTCTGAATGTGCACAACAATTAaaccaattctatgtatttaaacAACAGAGCGTTAGATCAGATGAAATTTTAAGACAATATATAtctgaattaaaaacacaaCAAATTGAATTGCAACTCtcagaatatttaaaaacggaaaatatagaagaaaataaattcaaaggTGAAGATAATTTAGATAACACAGAAAATGTGACAAATGAATCATCTGATCATTTTGAATCAAGTGATTTCGAAGACTctgggaaaagaaaatcaaataatCGTCCAACAAAGAAAACTAAAAACACGACTAATTTACCTTTTACGTGTCCAATATGTACAGAAAGTTTTGATTTAAATGAAGATTTACGAGTACATATGATATGTCATCCTTCAGATAACAAAATAGTTTGTACAGTATGCCAGAAACAATTTACAGATGTTAAAGTTTTACGAAGACATGTTAGAATTCATATGATTACGAAACCATTCATTTGTGAAATATGTAAGAAAGGTTTTACTGAATCTGGAAGTTTAACGAGACATTTAAGAAAACATAAAGGAGAAAAGAGGCACTTATGTACCGTTTGTGGAAAAGGATTCTACGAAGCAAATGTATTATCTGTTCATATGAGAACTCATACCGgaGAAAAACCAATTCAATGTACAGAATGCAAAAAGCGATTTTCTGATCCGAACGGTTTACGTAGTCATATGAAGTCACATACTGgcgaaaaaaaatatgtttgtcaCATTTGTAATAAACCATTTGGTCATTCATTTGTTCTAAAGAAGCATTTACGAGTACACAGTGGAGAACGGCCTTATTTGTGTTCAGTTTGTGGGAAATCTTTCACACAATCGCATTATGTATCCATACACATGAGACAACATACAGGTGAACTTCCGTACGTTTGTACAATCTGCAACAAAGGTTTCACACAGAACAGCCAACTAGAAGTTCACATGCGGGTTCATACTGGCTTCAAGCCGTACATTTGTGCTGTGTGTGGCAAAGCCTGCGCCCGATCTGGGGATCTAACAACTCACATGCGATCACACTCCGGGGAACGACCCTTCGGATGCGCGCACTGTCCACGGCGCTACGCCACCAGTAGTCATTTAGCTGTGCACGTACGTTCGCATACCGGACAGAAGACACACACCTGTACAGTCTGTAATAAGGGATTCCGGGACTCACAAGGATTAAAGGCACACTTAAGAACCCATACTGGGGAAAAACCGTATGAATGTTCGGTTTGTGGGCACAGATTCGCACAGAGTGGGGCCCTAGCAACTCATAGAAAGATTCATGCGGCTGGCAgagcaaaataa
Protein Sequence: MEEGIILNIDKVCRSCLMEKTEMRSLYEEQITTMYSYCTSVSIMSNDGMPMLLCSECAQQLNQFYVFKQQSVRSDEILRQYISELKTQQIELQLSEYLKTENIEENKFKGEDNLDNTENVTNESSDHFESSDFEDSGKRKSNNRPTKKTKNTTNLPFTCPICTESFDLNEDLRVHMICHPSDNKIVCTVCQKQFTDVKVLRRHVRIHMITKPFICEICKKGFTESGSLTRHLRKHKGEKRHLCTVCGKGFYEANVLSVHMRTHTGEKPIQCTECKKRFSDPNGLRSHMKSHTGEKKYVCHICNKPFGHSFVLKKHLRVHSGERPYLCSVCGKSFTQSHYVSIHMRQHTGELPYVCTICNKGFTQNSQLEVHMRVHTGFKPYICAVCGKACARSGDLTTHMRSHSGERPFGCAHCPRRYATSSHLAVHVRSHTGQKTHTCTVCNKGFRDSQGLKAHLRTHTGEKPYECSVCGHRFAQSGALATHRKIHAAGRAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01275583;
90% Identity: -
80% Identity: -