Basic Information

Insect: Ophonus ardosiacus
Gene Symbol: -
Assembly: GCA_943138245.1
Location: CALPBP010000781.1:66966-69982[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00017 0.03 16.3 2.9 1 23 158 180 158 180 0.98

2 12 0.00039 0.072 15.2 7.7 1 23 186 208 186 208 0.96

3 12 6.5e-07 0.00012 23.9 0.8 3 23 216 236 214 236 0.96

4 12 3.5e-07 6.4e-05 24.8 1.6 1 23 242 264 242 264 0.98

5 12 1.4e-06 0.00025 22.9 0.6 1 23 270 292 270 292 0.98

6 12 4.5e-06 0.00082 21.3 0.0 1 23 298 320 298 320 0.98

7 12 1.2e-05 0.0022 19.9 0.4 1 23 326 348 326 348 0.96

8 12 9.1e-07 0.00017 23.5 0.1 1 23 354 376 354 376 0.98

9 12 1.8e-06 0.00033 22.5 1.0 1 23 382 404 382 404 0.98

10 12 4.2e-07 7.7e-05 24.5 0.2 1 23 410 432 410 432 0.99

11 12 3.6e-06 0.00065 21.6 0.7 1 23 438 460 438 460 0.97

12 12 8.8e-08 1.6e-05 26.7 0.6 1 23 466 488 466 488 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00017	0.03	16.3	2.9	1	23	158	180	158	180	0.98
2	12	0.00039	0.072	15.2	7.7	1	23	186	208	186	208	0.96
3	12	6.5e-07	0.00012	23.9	0.8	3	23	216	236	214	236	0.96
4	12	3.5e-07	6.4e-05	24.8	1.6	1	23	242	264	242	264	0.98
5	12	1.4e-06	0.00025	22.9	0.6	1	23	270	292	270	292	0.98
6	12	4.5e-06	0.00082	21.3	0.0	1	23	298	320	298	320	0.98
7	12	1.2e-05	0.0022	19.9	0.4	1	23	326	348	326	348	0.96
8	12	9.1e-07	0.00017	23.5	0.1	1	23	354	376	354	376	0.98
9	12	1.8e-06	0.00033	22.5	1.0	1	23	382	404	382	404	0.98
10	12	4.2e-07	7.7e-05	24.5	0.2	1	23	410	432	410	432	0.99
11	12	3.6e-06	0.00065	21.6	0.7	1	23	438	460	438	460	0.97
12	12	8.8e-08	1.6e-05	26.7	0.6	1	23	466	488	466	488	0.99

Sequence Information

Coding Sequence: ATGGTATTTAATGAAGAAGTCCAAATAGATAAACTTTGTAGAACTTGTTTAACAGCTGACGGAGAAATGAGTTCTCTTCATTATAAAAACGAAACATTTACTTCTAGATTATTTGATATGTTATTAGCTTGTACATCTTTAGAAATTACAGAAAGCGATGGACTACCAGAACAAATTTGTTCCCAATGTGTAAGTAATGTTATTCAGGCATATTCCTTTCGACAGCTTTGTCGGCAATCAGACGACACTTTGAAGAAATATTTGAGCAAGGAAAACAGTAATCAGACTTCAAAACACAGCAGTGATAATCCAATAAATGGATTTGATTTATCATTGTttgatacagaaaaaataaatggGCAGTCCAAAAGGACGTCTAAAGTATCTAAAGAAAATTcgaaaaagagaaaaaagtaTTCTGAATCTTCAGAAGAAAATTGTGATACTAATGATGATACAGAACAGCCGTTATATCCTTGCACTGAGTGTACGCAGTGTTTTACTGTCTACCAAGATCTTAAAGTACATAAACAAACTCACAGTAAAATAACTCAACACATTTGCAAAATTTGTCATCAACATTTTTCCAGTTCCAGTTCGTTATCTCGTCATTTTAAGATTCACGCTGGTGTTAAGTCTCATCTATGCTCAGAATGTGGCAAAGGTTTTACGAGAAGCGATGATCTAGCCCAGCACGCTAGAACGCATACAGGCGAACGACCATATTCCTGTACTTTGTGTAGAAAATCATTTACTCAGTCGTCACAGTTACAGGAACATCTTAGGGCACACGCAGACCAAAAAAGTTTCGTTTGTACCACATGTGGCAAAGCGTTTTCTAGATATAATAGTTTGTCTGGTCATATGAAAATACATACGGGTGGACGAAGTTATCCATGTGGAGTTTGTGGAAAAggATTATCGAGTAGCGGGGCTCTAACCCTTCATATGAAAACACACACGGGTGAAAAAAATCACATCTGTGGCATATGCGGTAAAGCTTTCGCATACTCCGGCCATCTAGTTATCCATTCTCGTATTCATAGCGGCGAAAGACCTTACATATGCCAAGTATGTGGCAAAGGTTTCCCCGACGCATCTAGGCTTCGTGTCCATCAACGTTCTCACACCGGAGAACGGCCGTACATCTGTTCCGTGTGCGGTAGAGGATGCGTAACTTCTTCAGAACTTAAAAAGCACTTGAGGTTACACACTGGAGAAAAGCCCTACAGGTGTGAACTTTGTCCGAAAGCTTTCCCTCGGTCAGAGGATTTGAGGATTCATGTTAAGACGCATACAAATAATAGAAATCATGTTTGTGGTATTTGTAATAAAGGATTTTATCAAGGGTCTACCCTAAAAGTTCATATGAGGATACATACTGGAGAGAAACCGTATAGATGTAATGTTTGTGACAAAGCTTTTTCACAAACTGGAACTTTGAGTGCGCATATGAAGACACACGTGTAA
Protein Sequence: MVFNEEVQIDKLCRTCLTADGEMSSLHYKNETFTSRLFDMLLACTSLEITESDGLPEQICSQCVSNVIQAYSFRQLCRQSDDTLKKYLSKENSNQTSKHSSDNPINGFDLSLFDTEKINGQSKRTSKVSKENSKKRKKYSESSEENCDTNDDTEQPLYPCTECTQCFTVYQDLKVHKQTHSKITQHICKICHQHFSSSSSLSRHFKIHAGVKSHLCSECGKGFTRSDDLAQHARTHTGERPYSCTLCRKSFTQSSQLQEHLRAHADQKSFVCTTCGKAFSRYNSLSGHMKIHTGGRSYPCGVCGKGLSSSGALTLHMKTHTGEKNHICGICGKAFAYSGHLVIHSRIHSGERPYICQVCGKGFPDASRLRVHQRSHTGERPYICSVCGRGCVTSSELKKHLRLHTGEKPYRCELCPKAFPRSEDLRIHVKTHTNNRNHVCGICNKGFYQGSTLKVHMRIHTGEKPYRCNVCDKAFSQTGTLSAHMKTHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00470148;
90% Identity: iTF_00769005;
80% Identity: -