Basic Information

Gene Symbol
-
Assembly
GCA_943138245.1
Location
CALPBP010000470.1:47214-54184[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.03 86 5.0 0.0 30 44 49 64 7 66 0.82
2 4 0.0063 18 7.1 0.2 24 46 139 166 106 166 0.81
3 4 0.00023 0.66 11.7 0.7 3 42 234 287 232 291 0.70
4 4 0.0013 3.7 9.3 0.5 4 45 371 423 368 424 0.90

Sequence Information

Coding Sequence
atgCAGTCAGATTCATCAAAAACTACGTGGCACAAAGGAGACACTCTTCAATTAATCAAATTAATCGGCGCATACAAATCGCCTggaacagaaaaaataaataataatgaattatatatCCAAGTTGCAAATAAAATGTTCGAATATGGCATTTCTAGGACTTATATTCAGtgtaaaaataagtggaaaGAAATAGTAGATTCttataatgaatataataaaaataaactgggCGATGAACCGCCGTTTTACTCAGAATTAAACAAAGTATTATCCGAAAACGACACTTCAAACGATGGATTAAATCCGTTCGGGCCTCCTTGGTCGCAATACGAAACTACTTTTCTCATTAAAGTTATGAATGTGGGTAATTTTATCCACAAACTAAAAGTGGAAGAACCGTTAAATGTATATGAACAAATAtcacaatatttacaaaaagtgGGTTCTATTCATCGTTCAAAAGAAGACATACAACAAAGatggaaaaatttaaaacaatcttACATCAAATACATAAAAGGCGACCTCctccattttaaatatttcgaaGTAATGGATGCTTTATTAGATTGGGAACCCAATTCCATAGCATTTGAAGAAGATCAATTCAAAGATGGCCATGAATACGGGGATGAAAAATATCAGAATCCAGATGATTACGAAATAAAAGGGACTATGTCTAGTAAACGCGCACTTAACTGGACACACAAGGAAACGGAAATATTATTAGAAGTTGTACAAAAATACAACTTAAAACAAATGAGAAGAGATGATATTTCGGCTGTTTTTGATGAGGCGTCAGTTCAGCTTCGTTTACAAGGATATAAGCGATCGGCGGAGCAATGTCGGGTGAAGTTCAAACATTTAAAGGTAAAATACTTGTCTGCTTTGAAGAAAACCGCGGAAAACGAAAACCCTGAGCGCTATTTCTACCATTTCgacaaaatgaaagaaataatgCAGAGCGAAGTAGAGACTGATGAAAATAGCGATCTGACTCAAGACGAACAATATGAAATTGAATATTTGGAGGATGAAGAAGGTTACGAGAAAGTGCTACAGAACTCGAAATACAGCTCGAAACATAACCGAAAAGGACGAGTTATTTGGTCGCAAACAGAAACGAAATATCTGCTCAATTTACTTAAGGCCAAGAATGTCAAACGATATTGCAGgcGCCAAACATTCGAAGAAATCGCCTTGGAAATGTCAAAAGCCGGCTACAAACGTTCGTCACAAATGTGCATGATAAAATGGAAAAATCTCCGTAACCAACTCTATTCTTGTATccgaaatatggtggaaggtaAAGAAGACCTCTGCCCATTCTACGACGAAATCTGCGAAATCGTGCAGAAAAATGGCCAAGTCGATATCTCTCTTATCTCCGACCATGAGCAAGAAGATCAGGACCACGATTTTGATGATGATGAAGACGAAGTGTTTGAAGAAGAAAAAGTAGAATTAAAGAGAACGCATGAAGAAGAAGAGGAAGAAGAGAAAGAAGTGAAACGCGTGAAAAACTGTGAAACAAATACGGAATCAACAGATGAGGAACGGTTAGTGTGTAATTTCAAAATGGATGACGTGGAACATTATTGTATGTCTTTAGCGAGTACGTTTAAACGATTGAATAAAAAGAAACAAgggaaattaaaaattgaaatacagAAATTGTTATATCGAGCAGAGTTTgatgataatttttaa
Protein Sequence
MQSDSSKTTWHKGDTLQLIKLIGAYKSPGTEKINNNELYIQVANKMFEYGISRTYIQCKNKWKEIVDSYNEYNKNKLGDEPPFYSELNKVLSENDTSNDGLNPFGPPWSQYETTFLIKVMNVGNFIHKLKVEEPLNVYEQISQYLQKVGSIHRSKEDIQQRWKNLKQSYIKYIKGDLLHFKYFEVMDALLDWEPNSIAFEEDQFKDGHEYGDEKYQNPDDYEIKGTMSSKRALNWTHKETEILLEVVQKYNLKQMRRDDISAVFDEASVQLRLQGYKRSAEQCRVKFKHLKVKYLSALKKTAENENPERYFYHFDKMKEIMQSEVETDENSDLTQDEQYEIEYLEDEEGYEKVLQNSKYSSKHNRKGRVIWSQTETKYLLNLLKAKNVKRYCRRQTFEEIALEMSKAGYKRSSQMCMIKWKNLRNQLYSCIRNMVEGKEDLCPFYDEICEIVQKNGQVDISLISDHEQEDQDHDFDDDEDEVFEEEKVELKRTHEEEEEEEKEVKRVKNCETNTESTDEERLVCNFKMDDVEHYCMSLASTFKRLNKKKQGKLKIEIQKLLYRAEFDDNF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-