Basic Information

Gene Symbol
ncor1
Assembly
GCA_943138245.1
Location
CALPBP010001097.1:142001-167923[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.3e-08 6.7e-05 24.5 0.0 3 43 362 402 361 405 0.96

Sequence Information

Coding Sequence
ATGCGACCTCGTGGCGATCACCCCGGCGGAGGTCAGGCCCCAGCACCGACAAGCCTGTCCACCCCTTCAGCGAGTCCAGGAGCGCACGTGCTGGCGGGGGCCGTGCAGGGTGTGCAGAGTGCAGGACACTCCCTACCACCCCAGCAGCTCGTCCCGCACCCCCAGGAGGCCGTCGTGCTCGCCTCTCAGCCCTTCAAGAAGATTCGGCTGCAGGAGCCGTTGAGGATTGATACCAGGGACCAGCCAGGTTCCTACAACCCGCAAGTGGAGGCCATTAGCCCAACGTTGCCAGATCACCACATCCAGGAGGACCAAGCCTTCAAGACAACGAAAGACGAACTCCTTCAGCAGATCGGCAAGGTGGATCGGGAGATCGCTAAGGCCGAGTCGCAAATCAGCATTCTCAAGAAGAAGCAAGCCGAGCTCGAAGAAATCGCTTCGAAACCTGCCGTGAAGCAAGACGTCGAAGAAATCGCACAGCCAAAACACCAGAGCCTTGCGCAGAAGATCTACGCTGAGAACCGTAAAAAAGCTCAGGCAGCCCATTCCTTATTGGACACCCTAGGCCCTAAGGTAGATATGCCCATCTATAACCAACCATCCGACACCACTGTCTACCACGAAAACAAGAGGAGGCACCAACTTTTCAAAAGAAGATTACTAGAATACTTTAAAAAACGGCATGCTGACAAAGAATCCAGGGAGTCATACCTCACGCAAACCTACAGTAAACTAATGCAGGAATGGTTAAGAAAGGTTGATAAGATCGAGTCCAGCCAGAAAAGAAAAGCGAAAGAAGCAAAAAACAGGGAATTCTTCGAGAAAGTCTTCCCCGAGTTGCGAAAACAAAGGGAAGACAAAGAACGCTTCAATAGAGTAGGCGCCAGGATTAAATCCGAAGCAGATTTGGAAGAAATCATGGACGGACTCCAAGAGCAAGAAATGGAGGACAAGAAAATGAGAAGTTACGCTGTCATACCGCCTATTTTATTAGACGCGAAGCAGCGAAAACTAAAATACGCGAATAATAACGGTCATATACTGGACATGGAGTCGGAGTATAAAGAACGGCAGCTGTTAAACGTGTGGACGCCTAGCGAAAACGAAGTATTCAAAGAAAAATACCTCCAACACCCGAAAAACTTTGGCGTTATAGCTTCGTACCTGGATAGAAAATCAGTTCAAGACTGCGTAcaacattattatttaactaagaaaacCGAAGGCTACAAACAACTCCTTAGAAAGTCCCGCCAACGCACCCGCGCAAGTCGAAACAACCCCCAGAAAGTAAACAACAGCGCCAACAACGCAGTAGTTGACATCCTCACCACCGGAGTAACAACGCGGCTACAACGCGAGCAACAACAAAAGACTGGCGGCAGCCAGCAGCCACAAACTGGAACAGAAGCCTCCTCCTGCACGTCCACGACGACCACGGTGACGACGACGACCAGCACGGTGGCTTTGACGGCGACGACGACGACCACCACCACGGCAGCTAACGGCACGACGGTGGTTGCGCCAACGGTCACGCCGAGCAAAACGAGCCAGGCGGAGGACAAAGCCCAGACGAAGGTGGTTAGCTCCAACAATGTGATTGTAAATACCAGCGCCAGCTCTGTGGTGGTTAGTAGTCCTTCGATTATGATCAAAACGGAGGAGAACACGACGACGAGCGAAATGAGGGAGACGGATCATGAAGCTGCTGTTAATAGGTGa
Protein Sequence
MRPRGDHPGGGQAPAPTSLSTPSASPGAHVLAGAVQGVQSAGHSLPPQQLVPHPQEAVVLASQPFKKIRLQEPLRIDTRDQPGSYNPQVEAISPTLPDHHIQEDQAFKTTKDELLQQIGKVDREIAKAESQISILKKKQAELEEIASKPAVKQDVEEIAQPKHQSLAQKIYAENRKKAQAAHSLLDTLGPKVDMPIYNQPSDTTVYHENKRRHQLFKRRLLEYFKKRHADKESRESYLTQTYSKLMQEWLRKVDKIESSQKRKAKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEMEDKKMRSYAVIPPILLDAKQRKLKYANNNGHILDMESEYKERQLLNVWTPSENEVFKEKYLQHPKNFGVIASYLDRKSVQDCVQHYYLTKKTEGYKQLLRKSRQRTRASRNNPQKVNNSANNAVVDILTTGVTTRLQREQQQKTGGSQQPQTGTEASSCTSTTTTVTTTTSTVALTATTTTTTTAANGTTVVAPTVTPSKTSQAEDKAQTKVVSSNNVIVNTSASSVVVSSPSIMIKTEENTTTSEMRETDHEAAVNR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00768190;
90% Identity
iTF_00768190;
80% Identity
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