Oard032419.1
Basic Information
- Insect
- Ophonus ardosiacus
- Gene Symbol
- clz9_6
- Assembly
- GCA_943138245.1
- Location
- CALPBP010000969.1:106780-108714[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-07 0.0002 22.6 0.0 5 35 29 60 27 69 0.89
Sequence Information
- Coding Sequence
- ATGGTCCGAAAATGTATGAGAAGTTTGTCTAATTGCCGAAATGGGAAACAACATAGGCCCTACAAATCTTATAACGATGTATCATTACAAAAAGCTGTTCAGGctgtaaaactaaaaaaaatgacCATAATGCAGGCCGCAGAACGTTATTGTATTCCAAAAAGTACCATTGGTCGAAAATTACTTAATCAAAACAATTTACGAAAGACAGCTGGACGACCAACTTTATTTTCCGAATATGAGGAGACACACTTTATAAAACACTTAAATACTGTAGCCAGTTGGGGCTATCCATTTGATATGTTAGATTTGAGACTACTTGCAAAAGCATATCTGGACAAAATAGGACGAATAGAAAGACGCCTAAATAATAACTTACCTGGGAGAGATTGGGCTAGTAATTTCGTGCGAAGATATAAAGATCAAATTTCCTACCGTTTTTCGTCGAATATTTCATCAAAAAGAGCTGCccttacttcagaaattgtgaaaattttttttgaaaatgctGTCTCTGTCCTAGATGGTATTCCTCCATCATGTATTATCAATTATGATGAGACTAATTTAACAGACAACCCgggtaataaaaagtttattttcaaAAGAGGAACGAAGTACCCGGAAAGAGTCATTAATTCCACAAAAACATCTGTAAGTTTAATGTATGCTGGAACAGCGGAAGGTGAGCTTCTTCCTACCTACGTTGTTTATAAATCGGAACACCTTTGGGATACATGGACAGAAAATGGACCCGAAGGAACACGATATAATCGCTCGAAGAGCGGATGGTTTGATTCAGTTTGCTTCGAGGACTGGTTCTTTTCCGTTGTCGTTCCTTTTTGCAGAAATAAGGACGGCGCGAAAGTGCTAATAGGTGATAACTTATCATCTCACTTTTCTAGAGCGGTGTTGCAGAAGTGTGAACAATTAAACATAGTTTTCATGTGTTTACCTGCAAATGCAACCCACATATTGCAACCACTGGACGTAGCCTTTTATGcccctttaaaaaaatattggcgAGAAATACTAACTGAATGGAAAAGAACTGATGGACGTAGAGCATCGGTTCTTTCTAAAGATGCATTCCCGAAGCTCCTTAAAAAATTAgccaataaattaaattcttcgGAACGTGGTAAGCAAAATCTTATTGGAGGATTTGCGAAAACAGGTTTGTACCCTCTTGATCCGAAGCGTCCACTAGAGAGGTTACCAAGAACGGATAATGATgaaaacaacataaataacGTCGTTTCCGAAGCTGTTTTAGAAATGCTGACTGATATGCGGGGCAGTTCAGGACCAAATGAACCAAAAAGAAGAGGCAAAAAAGTTCAAGTGGAGCCTGGAAAAAGTATTTCTGCTTGTGACGTATTGGATCAACCTTCCACTTCAGGATTAGTTAAgaacaaaaataaatcaaaacgcGAATCTTCTAGTAGCGAATCTTCAAGTAGCGAATCTTCAAGTAGCGATTCTTCAAGTAGCGATTCTTCGAGTAGCAACGATGACTCACATCCCTTAATTAAGAGTAGCGGCGATATCTCACCGCCTATAATGGATAATACCGATGATACGcacaatcaaaattttgacgagcCGGGTGATAACGAAAAGtcaattattaagtttaaaataaatgattggATACTAGTCAAGTATTCAAACTACAAATCGGAGCTACATTATGTAGGCAGAATCACAAATATAAGTACTTCTGCTACTCAAAATACTTACCATGTAGAATTTTTGAAGAGGAAACAATCCCTATTAAAGGAATTTACATTTACTGAAACAGACCCTAAAGATACTGATGATATTAGCGATGACTTGATTGTGAAGAAATTAAAGTCACCAAAAATTATAGGCTCGGGATCAAgaaagtttttgaaatttactgaaaatttttcaaaatataatattgactGA
- Protein Sequence
- MVRKCMRSLSNCRNGKQHRPYKSYNDVSLQKAVQAVKLKKMTIMQAAERYCIPKSTIGRKLLNQNNLRKTAGRPTLFSEYEETHFIKHLNTVASWGYPFDMLDLRLLAKAYLDKIGRIERRLNNNLPGRDWASNFVRRYKDQISYRFSSNISSKRAALTSEIVKIFFENAVSVLDGIPPSCIINYDETNLTDNPGNKKFIFKRGTKYPERVINSTKTSVSLMYAGTAEGELLPTYVVYKSEHLWDTWTENGPEGTRYNRSKSGWFDSVCFEDWFFSVVVPFCRNKDGAKVLIGDNLSSHFSRAVLQKCEQLNIVFMCLPANATHILQPLDVAFYAPLKKYWREILTEWKRTDGRRASVLSKDAFPKLLKKLANKLNSSERGKQNLIGGFAKTGLYPLDPKRPLERLPRTDNDENNINNVVSEAVLEMLTDMRGSSGPNEPKRRGKKVQVEPGKSISACDVLDQPSTSGLVKNKNKSKRESSSSESSSSESSSSDSSSSDSSSSNDDSHPLIKSSGDISPPIMDNTDDTHNQNFDEPGDNEKSIIKFKINDWILVKYSNYKSELHYVGRITNISTSATQNTYHVEFLKRKQSLLKEFTFTETDPKDTDDISDDLIVKKLKSPKIIGSGSRKFLKFTENFSKYNID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01104249;
- 90% Identity
- iTF_01104249;
- 80% Identity
- -