Oard034681.1
Basic Information
- Insect
- Ophonus ardosiacus
- Gene Symbol
- clz9
- Assembly
- GCA_943138245.1
- Location
- CALPBP010001048.1:1091232-1093472[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.6e-11 4.8e-08 34.2 0.0 5 42 15 51 14 53 0.92 2 2 2.5 1.6e+03 0.5 0.0 28 36 407 415 406 420 0.85
Sequence Information
- Coding Sequence
- ATGACTACTCGAAGGAAACTGAAAAATTATAACGTGGTTGTATTAGAGGAAGCTCTAGATGCAATACAAAAAGGAATGTCTGTTAAAGCAGCTTCCAAAAGGTACAATATACCGCGAACCAcattaatatataaatcaaaGGGCAAATATCCAGTTCACTGTAGAATGGGACCTGCAACAATTCTTACAAATGAAGAGGAGAATATATTGGTTCGTTGGTTATTTTCCATAGCAGATAGTGGATTTCCTGCTACAAAAGATCAACTAATAGATTCAGTTGAATTGTTGTGTAAAAGACTCAACAGGAAAACTAATTTCATAAATGGACGACCTGGAAGGAAAtggttacatttattttttaaacgccATCCCGAAATATCGACTCGAATTTCTGAAAATTTAACTTTATCAAGATACAGTGCCACAGAAGTTAAAATAAGATCATGGTTTACTGAAATACGTAATTAtatcgaaaaaaataattacatagaaatttttaatgatCCTCGTCGTATTTATAACGCAGATGAGACTGCTTTCTTTTTAAATCCGAAAGGAAAAAAGGTTTTAGTGCAAAAAGGCGTAAAAACTGTATATGCAGTCTCAGGAAATTCTGATAAAGAATGTCTTACAGTATTGCTATCGGCCAACGCCGCAGGAATGATACCACCTCCAATggttatatttccatatttgaGGATgccaaaaaatatatcattagcaATGCCTGAGAAATGGGCCATAGGAAAAAGTGCGTCAGGATGGATGACTGCTGAGACTTTCTTTGAATATGTTGCCAATGTATTTTTTCCGTGGCTCTTGgagaacaatattaaatttcccGTAATTCTATTTGTGGATGGGCACGCAAGTCATCTAACTCTGGATCTAAGTAATTTTTGTTCTGAAAACAACATTGTTTTAATAGCACTTTATCCAAACTCTACCCACATCCTGCAGCCTGTGGACGTAGCTGTCTTCGGTCCTCTAAAATCAGCATGGAAAAGTGGAGTACATAGTTGGATAGTGGAGAATAACGgaggtttaaaattaaatagagatGAATTTTGTCCTTTACTggataaagttattaaacaaagTATTAAACCTGAAATGTTAATAAATGGATTTAGAGGATGTGGACTTTTTCCTTTCAATCCTGACGCCATagcttttaataaatactttaagaCACCTAATACTTCCAAAACTAATACCATACCAAAATCAACATTACAATTACATCTAAGTTTCATTGAAAATAGGATTGGTgctaaaataaacaattttaaaacatcCGGAGAACAGTGGGAGGGTAATCTAGAAGACAGATCACTTTTTCAATTTTGGAAGGATCTTGTGAATGAAACTGAACGTACGAATGATTATAATTCGTTTGAGGAAAACAATGACGAAGTTTTATTAAATCCTTTACTTACAAATACTTCTGATGATGTTCAACAACCACAGAATGTTTTAAACGAGGAAAATGAAAGACATGATAATAATGAAGctgaaaatacaaataatttctcATACGAACATAACAATGATacacaaaattgcaataatataataattccaTCCTCATTCGAAACAATACCTTCACCATTTAAAAAGACTTTGTTCTGGCCTCAAACACCACAGTTATCTAAATCAAGACGAGTTCGGGAAAAAGTTCCATCTGTTGCGACTTCAGAAGAATGGaaggaatattttaataaaaagaaacagaaaaaagaagaaattgAAAAGGAAAAGTTAGAGAAGAAACGACAacgagaattaaaaaaaataaaaaacaaaaaaagtaaattatcagTTAAAAAGAAACTCAATTTTGAACAGTACTCTTCAGATAATTCTTCCGAAAGCATATGTTTAGAATCTGAGGGTGAAGGCGATGACTGGGGAAAGGAGAGCACAGCTAGTGAGGATTCTGATTGTGACACACATatgaaaacaaaagaaaatgaaaaaagttataacataaatgaatatgttataattttatacgaaaatgaatatTATCCCGGAAAGATTACAAATATTGATAACAACAAGAAAAAAATCGAAGTAAATTGTATGCAAATGAGCACGACAAACTGGAAATGGCCAGAAATTAAGGATTGTTTATGGTACGATTATTCGGATGtagtacaaaaaattaaagaacctAAATCCATAAATAAAAGAGGTGTTTTCTGTGTAGAAGAAATTAAGTTATATAGGAAGTTTTAA
- Protein Sequence
- MTTRRKLKNYNVVVLEEALDAIQKGMSVKAASKRYNIPRTTLIYKSKGKYPVHCRMGPATILTNEEENILVRWLFSIADSGFPATKDQLIDSVELLCKRLNRKTNFINGRPGRKWLHLFFKRHPEISTRISENLTLSRYSATEVKIRSWFTEIRNYIEKNNYIEIFNDPRRIYNADETAFFLNPKGKKVLVQKGVKTVYAVSGNSDKECLTVLLSANAAGMIPPPMVIFPYLRMPKNISLAMPEKWAIGKSASGWMTAETFFEYVANVFFPWLLENNIKFPVILFVDGHASHLTLDLSNFCSENNIVLIALYPNSTHILQPVDVAVFGPLKSAWKSGVHSWIVENNGGLKLNRDEFCPLLDKVIKQSIKPEMLINGFRGCGLFPFNPDAIAFNKYFKTPNTSKTNTIPKSTLQLHLSFIENRIGAKINNFKTSGEQWEGNLEDRSLFQFWKDLVNETERTNDYNSFEENNDEVLLNPLLTNTSDDVQQPQNVLNEENERHDNNEAENTNNFSYEHNNDTQNCNNIIIPSSFETIPSPFKKTLFWPQTPQLSKSRRVREKVPSVATSEEWKEYFNKKKQKKEEIEKEKLEKKRQRELKKIKNKKSKLSVKKKLNFEQYSSDNSSESICLESEGEGDDWGKESTASEDSDCDTHMKTKENEKSYNINEYVIILYENEYYPGKITNIDNNKKKIEVNCMQMSTTNWKWPEIKDCLWYDYSDVVQKIKEPKSINKRGVFCVEEIKLYRKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -