Basic Information

Gene Symbol
ct
Assembly
GCA_943138245.1
Location
CALPBP010000930.1:492630-500311[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-32 2.8e-28 99.3 0.1 2 77 376 452 375 454 0.96
2 2 4.8e-31 9e-27 94.5 0.0 3 75 590 663 588 667 0.95

Sequence Information

Coding Sequence
ATGAGCCATGGCCTCCTTCAACATTGTCTTCCAAACTATCCTGTTCTTTGCTTTCTCTTTCCAATTTGTACTTTTAATTCGCATTCCTTAGTTCGTTTGCAAAGTCGTCTTCGTTTTATCCGTCCAGTCCGAGGCTCTGTTGAAGGCTTCGTAACCAGTGGGGTTTTACAGGACCGGGTGGTTAGCCATGTGCCCAACCCCCTTTCCAGAGGACCATTTGGTAAAGACCCTGGCATCCCCGCCTTCGGCCGTACCGAACAAGACATCGCCGAAGAAAGGATAGCTCACATTCTAAGCGAAGCTAGCCATATGATGAAAACACAAACCCCCGAAGATTCTCACAGCAACGATGACAGCAAGAGTCCATCGCAAGGACAATGTCCGAGTCCTTTTTCCAAAGATTCCTCGCAAAATCGACGGCTGaaaaagtatgaaaatgatGACATACCACAAGAAAAGGTTGTTAGGATATACCAGGAAGAGTTGGCAAAATTAATGGGAAGGAGAGCTGAGGATATTCGAAATCCTAGAGACCATTTTTCgagTCTTTTCTTTCCACAATTCCTCAACAGCGGCATGCCGATGGACCGAACCCAAGAAGAAATCCGCATGGCGTTAGACGCTTACCATAGAGAATTAGCCAAACTGAATCAATGCCAGAACCCTGGAAACCTTCCAAACCTTCCAGGACTTCCAAGTCTTCTCGCATTGCAACAGCAAGCCCTCGCCCAAAGCCAGCAACACGTTAATGGAGGCGTCCAGGATTTATCTCTCCCTAAAGAAAAAGCAAAATCCGTAAATGGCATGGACGACAAAGATAAAGACAGTGAAGAGATGAGGCATGCCGGAAGTGCGTTTAGTTTGGTGCGGCCGAAACTCGAACCAGGAACAACACAACCTCAAACTGGAAGCACGGCGTCCAGTCCGTTAGGGAATTCAATTTTACCACCAGCAATGACTCCTACTGAAGATTTTACTTCGTCAGCTGCTGCTAGTCCGTTACAACGAATGGCCTCGATAACAAATTCCTTGATCTCTCAACCTCCAACCCAATCACACCACTCACCTTCCCAAAGACCTTTAAAAGCTGTCCTTCCACCTATAACACAACAACAGTTCGATATGTACAACAATTTAAACACTGAAGAAATCGTCAAAAAAGTTAAAGAACAACTAAGCCAGTATTCCATCAGCCAAAGATTGTTTGGTGAATCAGTACTCGGTTTATCGCAGGGAAGTGTTAGTGATTTATTAGCCCGCCCAAAACCATGGCATATGTTGACACAAAAAGGGCGGGAACCTTTCATAAGAATGAAAATGTTCTTGGAAGACGACAACGCAGTTCACAAATTAGTTGCAAGTCAGTACAAAATTGCCCCGGAAAAGCTTATGCGAACTGGAGGCTACGGCGGTAGCTCTTCTTGTAGCGCGATAGGAAAACCCATGCCTCCCACCCCTAAAATGATCTCAGACGCCGCTGGATTACTCACCAAAATGCAACAAGATAGCGGTAATCTCCTCCCGCCATCTTTGCAGCTCGGCCCGCCAAATCAAGCACAACCTCAACCACCCCCTCCCCCGATGTTATTAACACCTCCCGGAATTCCACCCCATCATCCGATGAATTTACAAAGTGCAGAACATATGAAAAAGGCGAATCAAAGTCCACATTTGCAGCATTCGCCAATGCCGCAACAACCGTCTTCCGCGTTGAGAAGTTTGCATCAACATATTTCGCCCAGTGTGTATGAAATGGCGGCATTAACGCAAGATTTAGACACGCAGACGATCACCACGAAGATCAAAGAAGCTCTTTTGGCCAACAACATCGGACAGAaaaTTTTTGGCGAAGCAGTTCTGGGTCTTTCCCAAGGTTCAGTAAGTGAATTACTCTCTAAACCAAAACCCTGGCATATGCTGAGTATCAAAGGCCGAGAACCCTTTATTCGGATGCAACTGTGGCTCAATGACGCACATAACATCGATCGCCTACAAGCCCTGAAGAATGAAAGACGAGAAGCAAATAAAAGAAGACGATCTTCTGGACCTGGCGCTCACGATAACAGTTCGGATACATCGTCTAATGATACTTCCGAGTTTTACCACTCCAATTCACCGGGCCCAGGACCTCCAAGCGCCAAAAAACAAAGGGTATTATTCTCCGAAGAGCAGAAAGAAGCTTTAAGGTTAGCTTTCGCTCTTGACCCGTACCCAAACGTAGGAACGATTGAGTTTCTAGCGAATGAGTTAGCTTTGGCTAGTCGGACCATAACAAATTGGTTCCACAACCATCGAATGAGGTTAAAACAACAAGTACCCCATGGAATGCCTTCCGATATCCCTCCTAGGGATCAAAACAGCGGACAAACTCCCTTTGACCCCGTACAATTCAGACTGTTATTAAACCAAAGATTACTAGATCTATCTAAAGAACGTATGGGTCTTGGAGGAGTACCGCTTCCCTATCCACCGTACTTTGCCGCTAATTCAAATCTCGCGGCATTAATCAGCCGGGGGTTACTTCCTGCCGGTGATGTGGACCTATCAGCGATCAACAACGCCGTCAAGGAGCAAATGAGCGGTTTAGACCTCTCAATGACGTCATTAAAACGCGAGCCTTCTGGGGATTACGACGATGAAGACGACGTTGAAAGCAACATGGGTTCCGAAGACTCCAACATGTCAGGGAGTCTTCATGGGGATGCAGTCAAAGCAGAACCTAAACCCGTTTCAGCGGCGAGATCATCTCGAAGAAAACCAGCGGCTCCGCAATGGGTCAACCCCGAATGGCAAGACGAAAAAGAAAAACCAGCCGCGGGTGATGAAGTTATTATTAACGGTGTTTGTGTTATGCAGACAGAAGATTACGGCAGAAGAGGCTCCGAAGAAACTGTGCGAGTCGAACCTCAGGCGGTTTTAGACCGGTTTGAAGACGACGCCAGTGATGCTAGTAGTGAAAGCCACGAAGAAGGCGGCCAAGATCCTCCAAGTCCAAGTCCCGCGCAAGTAAAAGAAGAACGGGAGGACGGCGAGGACAACCGGCCGACAGATGACCCTGGGAACCAGGACGCGCCGGATAAACcaattaaaactgaaaatgaaGAAGAACGGTGGGACTATTAA
Protein Sequence
MSHGLLQHCLPNYPVLCFLFPICTFNSHSLVRLQSRLRFIRPVRGSVEGFVTSGVLQDRVVSHVPNPLSRGPFGKDPGIPAFGRTEQDIAEERIAHILSEASHMMKTQTPEDSHSNDDSKSPSQGQCPSPFSKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRAEDIRNPRDHFSSLFFPQFLNSGMPMDRTQEEIRMALDAYHRELAKLNQCQNPGNLPNLPGLPSLLALQQQALAQSQQHVNGGVQDLSLPKEKAKSVNGMDDKDKDSEEMRHAGSAFSLVRPKLEPGTTQPQTGSTASSPLGNSILPPAMTPTEDFTSSAAASPLQRMASITNSLISQPPTQSHHSPSQRPLKAVLPPITQQQFDMYNNLNTEEIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGSSSCSAIGKPMPPTPKMISDAAGLLTKMQQDSGNLLPPSLQLGPPNQAQPQPPPPPMLLTPPGIPPHHPMNLQSAEHMKKANQSPHLQHSPMPQQPSSALRSLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNIDRLQALKNERREANKRRRSSGPGAHDNSSDTSSNDTSEFYHSNSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELALASRTITNWFHNHRMRLKQQVPHGMPSDIPPRDQNSGQTPFDPVQFRLLLNQRLLDLSKERMGLGGVPLPYPPYFAANSNLAALISRGLLPAGDVDLSAINNAVKEQMSGLDLSMTSLKREPSGDYDDEDDVESNMGSEDSNMSGSLHGDAVKAEPKPVSAARSSRRKPAAPQWVNPEWQDEKEKPAAGDEVIINGVCVMQTEDYGRRGSEETVRVEPQAVLDRFEDDASDASSESHEEGGQDPPSPSPAQVKEEREDGEDNRPTDDPGNQDAPDKPIKTENEEERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01275050;
90% Identity
iTF_01275050;
80% Identity
iTF_01104152;