Basic Information

Gene Symbol
-
Assembly
GCA_943138245.1
Location
CALPBP010000391.1:658147-659213[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.3e-06 0.052 15.5 0.2 51 84 42 74 12 78 0.82
2 2 0.0023 14 7.7 0.1 46 84 111 146 100 149 0.76

Sequence Information

Coding Sequence
ATGGATAAACGAATACGAGGCAAGAATTTTAGTATTAATGAGAAGGAGGTTCTTTTAAATATAGTTCGTACCAAACaatgtattattgaaaacaagaaAACAGATGCAGAAagctcaaaaataaaaaatgaatgttGGGAGGAAATAGCAGAACAATTTAATTCTTCTAGTACTCATTGTACCCGAACTGCAAACCAGTTGAAAatctattatgaaaattataaagcTAAATTGAAGAAAAGTATTGCTGAAAATCacatagaacattatttattatctaaaaaagagaaagaaattttattagatttaataTTAGAGCAGGAgagtaaatatgaaaattttaataacaatgcatGGAGggatatttcaacaaaattcaATGAATCTTCTGATACTGAACGTTCCGCACAGTatctgtataatttttattctaattACAAATCGTCCTTAATGAAGAGCACTCAAGATGATCAaAGAGAAATATTACAAACctatggtggcccatttaagaAGCCACGTATCTATGCCCATGATGAAATTTTCGTGGAGTCACTTCAGACACAATTAACTCCTTTAAAAAATCCGTACGACTCATCTGCTTCTTATTTTAACGACACAGATTCATTAATTATAAGAGAGAAAAACGATGTTatggaaaatttagaaattattatcaaTGAAGAAATGGGCCAAAATTCTACTGATAAAGAAGACAGTAGTATATCGTTAAAAGAAAACCGAGAAAACTCAAGAACTGCAGAAGCATGTGAATCaataattacagaaaacaaaataaaagccAAGAGTATTATGAAAGAAAGTGTATTTGAAGAAGAGAAGCATAAAATTAAGATggaattatttaaaactcagTTACAACAAACTCGAGAAGAGCATAAAGAAAAAATGGAATGTTTAAGAATAGAGCAAgccataaaaaaatatgaattagaaataaagcaagttgaactaaaaataaaactgaaggaATTATCCACGACATAA
Protein Sequence
MDKRIRGKNFSINEKEVLLNIVRTKQCIIENKKTDAESSKIKNECWEEIAEQFNSSSTHCTRTANQLKIYYENYKAKLKKSIAENHIEHYLLSKKEKEILLDLILEQESKYENFNNNAWRDISTKFNESSDTERSAQYLYNFYSNYKSSLMKSTQDDQREILQTYGGPFKKPRIYAHDEIFVESLQTQLTPLKNPYDSSASYFNDTDSLIIREKNDVMENLEIIINEEMGQNSTDKEDSSISLKENRENSRTAEACESIITENKIKAKSIMKESVFEEEKHKIKMELFKTQLQQTREEHKEKMECLRIEQAIKKYELEIKQVELKIKLKELSTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-