Basic Information

Gene Symbol
Kdm5
Assembly
GCA_943138245.1
Location
CALPBP010000593.1:124444-141955[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.7e-22 1.7e-18 68.4 0.0 2 89 212 295 211 295 0.94

Sequence Information

Coding Sequence
ATGTCAGCCCGAACAGAAATCTTTTATAGAAAGAACAGAAATTTCGGCAagTTTACTGATTTGGAGATTGATAGTGAATCTAAAATGCCTGTTTATCATATAAGTATTCAACTATTGCATCCACTTGTTGATCACATAGAGATATCAAGAACTGATGAAGAGTTACTAATTGATTTGACCGGCAGTGATCAATGCATAAAAATAACAAGAACAAATCCGGAAGGGTTATTAATTGATTTGACTGGCAGTGACGATGAATTCACAGAAAAGACAAGAACTAATCCAGAAGAGTTATTAATTGATTTGACCGGCAATGACGATGAAGTAGAGAAAACAAGCTGCAGTTATCCCAATACATCGAGATCGAATTCATCTTTAAGTGAAAAATGTGTGGCAAAAGAGGAATTTCACTTCGAAGTGCCTCCCGAGGCACCTGTTTTCGAACCCACAGAACAGGAATTCCAGGATCCCTTGGCTTACATCAACAAAATACGACCCATAGCAGAAAAATCAGGAATATGCAAAATAAAGCCTCCTCCTCATTGGCAACCACCCTTTGCTGTGGATGTTGATAAATTAAGATTTACCCCTAGAATTCAGCGTTTGAATGAACTAGAGGCCAAAACACGCGTTAAATTAAATTTCCTCGACCAAATAGCAAAATTTTGGGATTTACAAGGATCGTCATTAAAAATTCCTATGGTAGAAAGACGTGCATTGGACTTGTCTTCTTTACACAGAATTGTCCAAGAAGAAGGAGGCCTAGAAATTTGTTCAAAAGAACGAAAATGGTCGAAGATAGCTGCCCGTATGGGCAATCCACAAGGAAAAGGAATCGGGACTATTTTAAAGAATCACTACGAAAGAATATTATATCCCTTTGACGTTTTTAAGCAGGGCAAAACATTAGCAGACATCAAAATCGAGCCTAAGGATGAGACAGATGTTAAGGTCGATAAAGATTATAAGCCCCATGGAATTATTAGCCGGCAGCAAATTAAACCTCCTCCAGAGAAACATGCAAGACGCTCGAAGCGGTATGAATCTACAGGTAGCTCTCCTTCGTCGTCTCCTGACAAGATCGAGTGTAAAGATTTCAGTATTTCAAGTGAAGtccaaaataataaagagcttCGTCGCTTACAGTTCTTTGGGGCTGGCCCGAAAATGGCTGGCTATAACCTGAAAGTAAAGGATGAAAATAAAACTCGAGGAAAGAAAGCTAATTACGACTATGATCCCCTCGCGAAGTACGTCTGCCACAACTGCGGTCGCGGAGACATCGAGGAGTCCATGCTGCTCTGCGACGGGTGCGACGATAGCTACCACACCTTTTGCCTCCTGCCCCCGTTGTCGGAGATCCCGAAAGGCGACTGGCGGTGCCCTAAGTGCGTCGCTGAAGAAGTTTCCAAGCCGATGGAGGCCTTCGGGTTCGAGCAGGCGCAGAGGGAGTACACCTTACAGCAGTTCGGGGAGATGGCTGATCAGTTCAAATCGGAGTACTTCAATATGCCTGTACACATGGTTCCAACACAATACGTTGAAAAGGAATTTTGGCGTATTGTATCATCAATAGATGAAGATGTTACTGTAGAGTATGGTGCAGACTTACACACAATGGACCACGGTTCTGGATTTCCAACAAAAACTTCGTTGAATTTGTATCCGGGCGATCAAGAATACGCGGATTCCAGTTGGAATTTGAACAACCTTCCAGTTTTGGAAGGGTCGGTTCTTGGACACATTAACGCTGACATTTCAGGAATGAAAGTTCCATGGATGTATGTGGGTATGTGCTTCGCCACATTCTGTTGGCACAACGAAGACCATTGGAGTTATTCCATCAACTATCTGCATTGGGGTGAACCTAAAACTTGGTACGGCGTTCCAGGCAGTAAAGCCGAATTATTTGAAGAAACCATGAAATCGGCAGCTCCAGAATTGTTTCATTCACAACCAGATTTACTCCACCAACTTGTAACAATTATGAACCCTAATATTTTGATGAATGCAGGCGTTCCTGTCTTCCGTACGGACCAACACGCGGGGGAATTTGTTATCACTTTTCCTAGGGCGTACCATGCAGGGTTCAATCAGGGGTACAACTTTGCTGAAGCTGTGAATTTTGCCCCGGCAGATTGGTTGAAGATGGGGCGAGAATGCATTTCACATTATTCGCATCTTAGACGGTTCTGTGTGTTCTCACATGATGAACTGGTTTGTAAGATGGCTTTAGACCCGGATAAATTAGATTTGACGGTCGCTGCTGCAACATATCAAGATATGCTCATTATGGTGGATAATGAAAAGAAGATGCGGAAAAGTTTGTTAGAGTGGggtGTAACTGAGGCCGAACGAGAGGCCTTCGAATTACTGCCGGACGACGAAAGGCAATGTGAAGTATGCAAAACAACTTGCTTCCTATCAGCAATGACATGTTCTTGTAATTCCGGAAGTTTAGTGTGTCTACGCCACTACACATCGTTATGCAATTGTCCACCAGAAAAACACACACTCCGTTACCGTTACACACTAGACGAGTTACCATTAATGTTACAAAAACTTAAACTTAAAGCGGAATCATTTGATAATTGGGTATGTCAAGTAAAAGATGCCCTAGATCCAAATACACCCACAACAATGGACTTGTCCGCCTTTAAAGAGCTACTGCACGAAGCAGAAGTCAAAAAATTCCCTAAATCAGATCTTTTACAAACGTTAACAATGGCCGTAGAAGACGCAGATAAATGCGCAAGTGTCATCCACCAACTAGACTTGAATAAAATGCGAACACGAACAAGAAACTCAGCTGATACCAAATATAAACTAACAGTAGAAGAACTGACTCTCTTCTGTGAAGAAATTGATAGTTTAGCCTGTACATTAAAAGAAGCAAAAAGTGTAAAAGATCTACTTAAACAAACCCAAGATTTCCAAAAAGAAAGTAATCGTTTATTAGAAcaaactttattggaaatagacGCAAATGAATTAGAAACATGTATAGATTCAGTATCAGGATTATGTATTGAGTTACCGGAATTGCGACAGCTACGTAATAGATTAAGTCAAGTAAACTGGCTGAAAGAAGTAAAACAAGCTCGATCTAAATGTGAATGTATGACTGTTACTACTCTTCGCACACTTCTTGCAACGGGAATTGCTCTACCAGTTGATACTGCCTTAGAAAAAGAATTAGCtgaattacaaattatattaactGATGTAGAAGAATGGGAAGAAAAGGCTAAAACAATGATAGACTCCAAAACTCCTGCTCCCCTTAACGACATCGAGAAAATGTTACAAGCTGCAGATAATATCGAAGCCTTTCTTCCCTCTGAAGAAGTATTACGCGATatagttaaaaaagtaaaagaatggCACAAAACCATTGATGAAATTCATTCGGGTGAAAGTTATCCATATTTCGACACCTTGGAGGAGATCATTAAAAAGGGTCGAAGTATTCCAACAGCCTTAAAAGAGCTAGAACGCTTGGAAAGCCAATATATCCAGGCAAAATCATGGAAAGACAGAACCGCTCGAACTTTCCTTCGTAAAAATTCGTCCGCACAACTTATGGAATCCTTATCCCCGAGATCTTTTTCGTCAGGGCCCGGCAAAGGAAAGAAACGCAGCGTAGGGGAAGAAGAAATAACGAGTATTgtgtcaaatattaaattaggCGGAAATTTAGACCCAGCCCAAGTTGTTTCCGCATTTAAAGAAGCCGAAGAACAAGAAATGGAGGCCATGAAAGCTCTTCGCAGAAAAAACATCCAGAAATTCGCCGAAGACACCACAGAATGCGAAAGCTACTGCTTGTGCAAAGGACCTTTGTCGGGATTGATGATGCAGTGTGAAATCTGCAGAGATTGGTTTCATAGTACCTGTATGCCCTTACCCAAAACCAGTCCTCAGATGCCCACAAGAATGAAATCCCCGAACCAAGTATTACGCGAATATAAATTCCTCTGCACCCGCTGTATGCGCACCCGCCGTCCTAGACTAGAAACAATCCTTTCTTTATTGGTTTCACTTCAGAAATTGGCTGTTCGGGTTCCTGAAGGAGAAGCATTACAATGTTTAACAGAACGAGCTATGAATTGGCAAGACCGCGTACGACAAGTTTTGTCTTCAACAGAATTAGCCACCGCATTATCCAGACTTTCTGTGATGTCTCAGAAAGTTCACGAAGCCGCCGCGCGGGAAAAGACTGAGAAGATCATCAACAGTGAGTTGAAAAAAGCCGCTAATAATCCTGACCTCGTACAAAAGATGCAATTTCTCACGGCCCAAAGCGGTATTGTTGATCCAGGAAGCGACAACTCCCTAGACGGACCCATTGTTCTACCGAACAGTTCGCCGAGAAGTAAGTCTGGTGAAGATTACACAAATGGAGAACACGCTTATTCCATTAACTTAACTCTTCCTGATAATGGAATTACATTTTCAAAAGATGGAATGCAAGTACATCTCACAGATGCCACCAGAGAACGATTGGAAAGTCTTATGTTGGAAGGCGATCTTCTGGAAGTTTCTTTGGATGAGACAAATCATATTTGGAAGTTGTTGCTTGCTACTCGTCCACCCTTAGAGAATGACAGATACATTGATTTTGATGTGAGTAGAGCAATGAAGGAATGTCAGAAACGATTATTCGGCAAAACCAACCGAGGCCGTAAACGCAAATCAGACGACGGAACTCTGGAAATAAAAAAACCCGCTAAGACCTCCGTAACGGAAAAAAAATTGCGCGTTTCAAAGATGAAAAACATGAAAGAGGGCGTTCGCAAACGTCGCGGTGAAGGCAACAAAAAGTCCACAAAACAAAGAGAGTCTGACGATGAAGAAGATTGTGCAGCGGAAGCCTGTCTCCGACCGGCAGGCAGGGAAGTTGACTGGGTGCAATGTGACGGTGGTTGCGACCAGTGGTTCCACATGCACTGCGTGGGGTTGGATAAGCATGATATCAACGAGGACGAAGACTACATCTGCATTAAGTGCTCACAGAACAACCCGCAAATAAATGACGTCACATGCTTCCAGCAATTAGATCTCTCCAGTCAACAACACACAGAGTTTGTCACTTCTGACTGTTGA
Protein Sequence
MSARTEIFYRKNRNFGKFTDLEIDSESKMPVYHISIQLLHPLVDHIEISRTDEELLIDLTGSDQCIKITRTNPEGLLIDLTGSDDEFTEKTRTNPEELLIDLTGNDDEVEKTSCSYPNTSRSNSSLSEKCVAKEEFHFEVPPEAPVFEPTEQEFQDPLAYINKIRPIAEKSGICKIKPPPHWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWDLQGSSLKIPMVERRALDLSSLHRIVQEEGGLEICSKERKWSKIAARMGNPQGKGIGTILKNHYERILYPFDVFKQGKTLADIKIEPKDETDVKVDKDYKPHGIISRQQIKPPPEKHARRSKRYESTGSSPSSSPDKIECKDFSISSEVQNNKELRRLQFFGAGPKMAGYNLKVKDENKTRGKKANYDYDPLAKYVCHNCGRGDIEESMLLCDGCDDSYHTFCLLPPLSEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHMVPTQYVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSLNLYPGDQEYADSSWNLNNLPVLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSKAELFEETMKSAAPELFHSQPDLLHQLVTIMNPNILMNAGVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECISHYSHLRRFCVFSHDELVCKMALDPDKLDLTVAAATYQDMLIMVDNEKKMRKSLLEWGVTEAEREAFELLPDDERQCEVCKTTCFLSAMTCSCNSGSLVCLRHYTSLCNCPPEKHTLRYRYTLDELPLMLQKLKLKAESFDNWVCQVKDALDPNTPTTMDLSAFKELLHEAEVKKFPKSDLLQTLTMAVEDADKCASVIHQLDLNKMRTRTRNSADTKYKLTVEELTLFCEEIDSLACTLKEAKSVKDLLKQTQDFQKESNRLLEQTLLEIDANELETCIDSVSGLCIELPELRQLRNRLSQVNWLKEVKQARSKCECMTVTTLRTLLATGIALPVDTALEKELAELQIILTDVEEWEEKAKTMIDSKTPAPLNDIEKMLQAADNIEAFLPSEEVLRDIVKKVKEWHKTIDEIHSGESYPYFDTLEEIIKKGRSIPTALKELERLESQYIQAKSWKDRTARTFLRKNSSAQLMESLSPRSFSSGPGKGKKRSVGEEEITSIVSNIKLGGNLDPAQVVSAFKEAEEQEMEAMKALRRKNIQKFAEDTTECESYCLCKGPLSGLMMQCEICRDWFHSTCMPLPKTSPQMPTRMKSPNQVLREYKFLCTRCMRTRRPRLETILSLLVSLQKLAVRVPEGEALQCLTERAMNWQDRVRQVLSSTELATALSRLSVMSQKVHEAAAREKTEKIINSELKKAANNPDLVQKMQFLTAQSGIVDPGSDNSLDGPIVLPNSSPRSKSGEDYTNGEHAYSINLTLPDNGITFSKDGMQVHLTDATRERLESLMLEGDLLEVSLDETNHIWKLLLATRPPLENDRYIDFDVSRAMKECQKRLFGKTNRGRKRKSDDGTLEIKKPAKTSVTEKKLRVSKMKNMKEGVRKRRGEGNKKSTKQRESDDEEDCAAEACLRPAGREVDWVQCDGGCDQWFHMHCVGLDKHDINEDEDYICIKCSQNNPQINDVTCFQQLDLSSQQHTEFVTSDC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00469414;
90% Identity
iTF_00767893;
80% Identity
-