Basic Information

Gene Symbol
ARID4B
Assembly
GCA_943138245.1
Location
CALPBP010000498.1:1217708-1238901[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.3e-28 5.9e-24 85.9 0.3 1 89 295 380 295 380 0.94

Sequence Information

Coding Sequence
ATGcaAGGAGACGATCCTCCATATCTTCCAGTAGGCACTGCTGTAAGTGCTAAATACAAAGGCGCATTTTGTGAAGCTAAAGTTAGTAAAGTCGTTCGTTGCGTTAAATGCAAGATTACCTACAAAATGGGCTTAGGAACTGCTACTGTCACCGATGAACAAATAAGAGGCCCACTTCGGGTTGGACACACTGTTCAGGCCCGGCATTCCGAAAAGAAGGAATTTATTGAAGCCACCATCACCAAAATTCAAGACTGTAGCCAATATACAGTCGTATTCGATGATGGTGACATAACAACGTTAAGACGAACTGCTCTTTGTTTAAAGAGTGGTCGACACTTTAACGAAAGCGAAACGTTGGATCAGTTACCTCTTACCCACCCAGAGCATTTTGGGAATCCCGTTGTGGGTGGTAGAAGAGGTAGGAGGAGTAGACAGCTAaaGGAAGACAGCAGCGAAGGCGAAGCTGAAGAGGAAACCGAACCCGATCTCGACTTATACAGTGGCGATATCGGAAAAGTGGTATGTGTGGAgggaaatgataaaaaaaagtcCAGGGATAATTGGTTCCCAGGTCTTGTTGTGGTGCCCAGCGCTCAGCCAACCGTTCGTATCAATGTGCGGGAAGAATATCTAGTGCGATCTTTCAAAGATGGCAGATAttacACAGTGCCAAAAAAAGAAATCTCTGAATTTTCCAGAGATTTGGGTGCGCGAATTGAGAGTACAGCTTTATCTGAAGCTATGGAAAAAGCTTTAAAATATCTTGACAGAGATGAATTACCTGTACATTGGGAGAGAGCTACTCTCTTTGATCTACAAATACCTGATAGTGATTCAGAAGAAAATTACACAGACagCTCTGACGACGAACCTCGAGAAGAAAAAGACCACTTCGTCGCCCAACTCTACAAATTCATGGACGATCGCGGTACCCCCTTAAACAAAAGTCCCATGATCGCAAATAGAGACGTTGATCTTTATCGACTATTCCGCGTTGTACATAAATTAGGCGGTTACAACCGTGTAACCAACCAGTCCAAATGGCGTTCTGTAACCATTAGATTAGGTTACCAACATAATCACGCTACGTATAATAGCGTCAAACAAGCATACAAAAAGTACCTGTTTAGTTTTGAAGAATTCTACCGAAAACTTGGTTGTACGATGATCAACCATCCAAGAAATGCGAAAAAACATCGGGGAAGAAGTTTAATTCGAGATAGAGATCGAGCTACACCTGTCAACAGCAGCCCTAGACCAGAAAGAATTGAAGATAGCAGTAGCGAACCGAAAGAAATTAAAGAAGAACCAGAAAAACCTAAACCCAAACCTGAAAatccgaagaaaaataattccgACAAAGAAGTCGATGAACGGTTAAAGAAAAAGGAAGGACTACTTGAATCAAGTGATAGTAGCAGTAGCAGTAATAGTAGTAGTGAGGGAACTATAGACGTGCAATCAGACACCGGACAAAGTACTTCCAAAcaaaaggaagaaaagaaaaaaatagaacCTCCTAAACCAAATAAAGAGCGAAAAATAAAAGCAGCAGTTGGAGAAAAAGTTAAAGCATTAGTTGAACAATTTGAAGAACAAAGCAAGAAGGAAACCATTATCAAAGAAGAAGATAAGGTACAACAGACTCGCTCAAAATCTTCGTccttaattttgaaaagtaagGAAGTTTCTTCACCAGATCGAaaggaaaaagaaaaagaaaaagaaaaggaggCACCTGGGAAAAGTACAAAGCCTAAAAAACAAGAAGAAGACAAAAAACGTGGTCGAAAACGAAAAGATACGGAGTCAGACAGCAAATCTCAATCAGAATCGAGTTCGGAATCTCCCGCGAGCACTCAGCCGGTCAACATCGGCGATAAACTCAAAGTATACTACGGTCCAACTCACGAATCAAAAGTTACTTACGAAGCTAAAGTCCTAGACATAAACCGCAACAGCAGTAGCGTAGTCTACCGAGTACACTACACCGGTTGGAACACTCGATACGATGAATGGATAAAACCCGCTCGAATCGCAGAAAATCTCAGCAACACCACAAAAGCAAAACGGCTGAAACAATCCCAAACAACTGGAAAACAATCAACACCGCCTAAACCAGCCGCGAAACGGGGTCGGGGCCAATCCGTCAGCAGCAGATCACAAGATCCTCCAAGGTCAACAACTCCATCATCAGTTACTTCGTCTTCCAGCAGAACGAAAAGCCCTGCGACTCCTGCCAGCTCAAAGAACTCGAGGGTTACTCGCCAAGGAGGAGAAAACAGTTCGACTAGTCGACGAACTCGAAGAACTTCCGCCCATACAGATTTATCAATTGCTTCCGATACTGAATCAGAACAATCAGATCAGTCAGAATCTGAACTTAGCAGAACGAGAAGTGGAAGTAAAACTGATGATAGAAAGAAAACATTATCAAAGAGAAAAGATGATGAAGATACTGAAAAAGAAGAGGATGATAAACCGAAGAAGCAACTTAAAAGAAAGAAGTCGCCCGAGCCAAAAAGTTCCTCGCCTGATAGTGATGAAGATTCGTCTTCACCTCCAAAAGGAAGAgattttgatttaaatcaaataagaTCCGAGTTAAAAGGATTTGAAAAAGCTGTTAAAATGACCACCAGCGGAGATTCAGCGCCAGAAACACCAACAGAAGACAAACAAATTGTATTAGAAATCAAaccaattattaatgaaaagaaaatcgaagaaaaagtTGCAacaaaaacagatttaaaacCAATAATTGAAAAAGCTTTAAGCACAGAAGATATCTACGAATTCAAAGAACCCGAACCGTTTGAATTTGAAACAAGGGCTTCCAAATTAAACGAAGATAAGTCGACAAAGAAACGACTTGTTCCTCGTCTTTTTGAAGAACTAGAAAAATCTCCCAAGAAAAAAGGTGGAAAGAGTCCACCGAAAAATGAAACCAAAGAAGTCGAAGAGAAAAAACGTACTTTTAAACGCACACCAATCAAAAAACTGGAAGACGAAGATGACAAATCCCCGAATAAAGAAGAAAACACTCCAGTCAAAACACGCCCAATATCTGCCTGCGAAGATCCTTTCGACAAGTTAGTCGAATCTCCTTCCTTCAATATCAATTCCATTTCATCTGGCAAGAAGTCTCCATCCATCACCGAAACTCCAAAATCAAAAGTTGTTAAAGCTTTGAACTTAGACGAAACCTTAAGCCTTTTCCGAGAGCTTCCAGAAACCGTTGGAGACGACAGCCGAGACCGTTTGGATATGTCAGACACTGATGACACTCAAACTGAACCACTCTTCAGCCACAAGGAACAAATTTTCTCCGATCCAAGTTTCAACAAACCAGAAACTTCAAGTTTGGATCCTATTTTTCGCGGTTTTACAGCTGTTAAGTGTGAAAGTGGTGACGAAAATAAAAAACGTTCGTTAAAAGACGGTGCGAGTGATGAAGACGATTCTATCACAGCCGCGATACAACGTGCAATATCTAATACAATGACAGATGAAGACAGTACGGAAGATGATTTGTTCATCACGCAACCGACTACAATTTATCAACCTAAAAAACCTAAAGAAGAACCCAAATCTTTGTCAGTATCACCTGTTGTGCCAGTTAAAAAAGAAATTCCTCCCGAGGAAGTAAAAGAACCTTTATCAATAAATACAGACACGAGTAAAGAATCAAAAGATGTTAAAGACATTCCGAAAACCCCTAAACAAATATCTCCTGCTCTTCAAGAAACAGACAGCTCTTTATTAGAAGCAATCAGTTTACaaacagaaatgttaaaaaaagaagaatccaGGGAACCACAAATAAAAACCGGGACAAAAATAGCAGATTCCATccttcaaaaattcaatatgATAAAGAAAAACGAAGAAGTTAAACCGgttaaaaatgaactaaaacTAGAACTTCCTCCAGTTAAACCTGAAAAACCGGAAGAacctaaaaaagaaataaaaccaGAACCCGAAATCAAAGAACCAGTCCAGGAAATCATAGTTAAAACAGAAATCGCCGAACCAGATTTCCAAGTTGAAATCAAAAAACGCTCATCTAAAAAAGTAGTTAGCCGCGAATTTATCGAAGAATCAGACACAGACAGTAGTGATTCAGAAGAACGGTTAGTGATTGCCCGTTCTGACGACGATTCCCAAACAAATCAATCCGATAAAATGGACTTTAAAGATACAGACAGCAACGTTTCTGCTCTCCACGCAAACACTGACGACTCCCAAGAAGAAGAACGCAATTTTAAGATCCAAGAAATGGTTAAACCAGAACCAACCCTCCCCGATTCCACTACAGAACCCGTGGAAGTAAAACCAGAACCTTCTGAGCCCGTAAAACAAGATGAGGAACCCGACAGCAATATTAATCTTCTTCTTTGTAAAGAGACAATCCCGGGTAGTCCAGCCCCAATCCCGGAAGTGTCCCCCGCTCCGGTAGAGCCTCGCCCCAAACCTAAAAGTGCGAAAAGTTTACTCTTAGAGATGCCGTTCGCAAGTGCACCAGGAAGCAGTAATAGTAAAGTGATGGCGAATCCTGTTGAAAGGGAACAACCGCAACAACCGAAGCAAGCTGCAGTCAAGCAAGACGCGCAACCGCTTGCTGTGCCTTTAGAACAATCGTGTGATGCGAATGAAGCTAATGTGGTTATGGACAATACGCCGCCCACCACACCTGAAAGTacaatttctaatttgtctccCAGAGGAGACCAAGACAGAATCTCTCCCAACACAGCAGATAATGAAAGCTGTAAGTCCACAGATTCTGGACAACGAACACAACCAAGTAAAGTGACACATTACAGCGAAGAAGATACGATGATGACGTCAGAAACTTGCCCAGCACCAAAGAAAACCCCCCGAGAAGACACCGCCGCGCCTTGTCGAAAACGGCGGCGGTCTTGTAAAACTTCCGATGATATCCCTGTTAAAAGGGGCAGAAAACCAAATGTTAGGAACGTTAGAGCGAATAGTGATAGCGATGATACGTCGGAGCATTCGGCTCCAGGTTCCACGCCACCTACCAGTTCAGCGACTTCTAGTTTGGTGACTATCACCGCACCGGAAACGAGGCTGAGTTCTAGGTCGCCTCGGCCGTCCAAGTACAACTTTATCATTGAGCTCGATCCAGGGTTGGATCCTGGTCAAAGAATCTCATTATTACAGCAAAAATTATCCGAATTAAGAAAGACGTACAATAATGTAAAGACTGAATTAGCTTGTATAGATAGAAGACGAAAGAAGCTGAGAAGAAGGGAACGCGAAGCATTAAAAGCGGCCAAACAAGAGATGGCGTGTTCGTGA
Protein Sequence
MQGDDPPYLPVGTAVSAKYKGAFCEAKVSKVVRCVKCKITYKMGLGTATVTDEQIRGPLRVGHTVQARHSEKKEFIEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRSRQLKEDSSEGEAEEETEPDLDLYSGDIGKVVCVEGNDKKKSRDNWFPGLVVVPSAQPTVRINVREEYLVRSFKDGRYYTVPKKEISEFSRDLGARIESTALSEAMEKALKYLDRDELPVHWERATLFDLQIPDSDSEENYTDSSDDEPREEKDHFVAQLYKFMDDRGTPLNKSPMIANRDVDLYRLFRVVHKLGGYNRVTNQSKWRSVTIRLGYQHNHATYNSVKQAYKKYLFSFEEFYRKLGCTMINHPRNAKKHRGRSLIRDRDRATPVNSSPRPERIEDSSSEPKEIKEEPEKPKPKPENPKKNNSDKEVDERLKKKEGLLESSDSSSSSNSSSEGTIDVQSDTGQSTSKQKEEKKKIEPPKPNKERKIKAAVGEKVKALVEQFEEQSKKETIIKEEDKVQQTRSKSSSLILKSKEVSSPDRKEKEKEKEKEAPGKSTKPKKQEEDKKRGRKRKDTESDSKSQSESSSESPASTQPVNIGDKLKVYYGPTHESKVTYEAKVLDINRNSSSVVYRVHYTGWNTRYDEWIKPARIAENLSNTTKAKRLKQSQTTGKQSTPPKPAAKRGRGQSVSSRSQDPPRSTTPSSVTSSSSRTKSPATPASSKNSRVTRQGGENSSTSRRTRRTSAHTDLSIASDTESEQSDQSESELSRTRSGSKTDDRKKTLSKRKDDEDTEKEEDDKPKKQLKRKKSPEPKSSSPDSDEDSSSPPKGRDFDLNQIRSELKGFEKAVKMTTSGDSAPETPTEDKQIVLEIKPIINEKKIEEKVATKTDLKPIIEKALSTEDIYEFKEPEPFEFETRASKLNEDKSTKKRLVPRLFEELEKSPKKKGGKSPPKNETKEVEEKKRTFKRTPIKKLEDEDDKSPNKEENTPVKTRPISACEDPFDKLVESPSFNINSISSGKKSPSITETPKSKVVKALNLDETLSLFRELPETVGDDSRDRLDMSDTDDTQTEPLFSHKEQIFSDPSFNKPETSSLDPIFRGFTAVKCESGDENKKRSLKDGASDEDDSITAAIQRAISNTMTDEDSTEDDLFITQPTTIYQPKKPKEEPKSLSVSPVVPVKKEIPPEEVKEPLSINTDTSKESKDVKDIPKTPKQISPALQETDSSLLEAISLQTEMLKKEESREPQIKTGTKIADSILQKFNMIKKNEEVKPVKNELKLELPPVKPEKPEEPKKEIKPEPEIKEPVQEIIVKTEIAEPDFQVEIKKRSSKKVVSREFIEESDTDSSDSEERLVIARSDDDSQTNQSDKMDFKDTDSNVSALHANTDDSQEEERNFKIQEMVKPEPTLPDSTTEPVEVKPEPSEPVKQDEEPDSNINLLLCKETIPGSPAPIPEVSPAPVEPRPKPKSAKSLLLEMPFASAPGSSNSKVMANPVEREQPQQPKQAAVKQDAQPLAVPLEQSCDANEANVVMDNTPPTTPESTISNLSPRGDQDRISPNTADNESCKSTDSGQRTQPSKVTHYSEEDTMMTSETCPAPKKTPREDTAAPCRKRRRSCKTSDDIPVKRGRKPNVRNVRANSDSDDTSEHSAPGSTPPTSSATSSLVTITAPETRLSSRSPRPSKYNFIIELDPGLDPGQRISLLQQKLSELRKTYNNVKTELACIDRRRKKLRRREREALKAAKQEMACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01225440;
90% Identity
iTF_00767889;
80% Identity
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