Oven006311.1
Basic Information
- Insect
- Ophion ventricosus
- Gene Symbol
- -
- Assembly
- GCA_963932345.1
- Location
- OZ010715.1:1183156-1190598[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.22 20 6.1 2.1 3 23 561 582 560 582 0.86 2 15 0.023 2.1 9.2 2.0 3 23 590 611 589 611 0.97 3 15 0.0082 0.73 10.6 1.2 2 23 1356 1378 1355 1378 0.96 4 15 0.034 3 8.7 0.4 2 23 1415 1437 1414 1437 0.95 5 15 0.007 0.62 10.8 0.7 3 23 1485 1506 1483 1507 0.95 6 15 0.0019 0.17 12.6 4.6 1 23 1627 1649 1627 1649 0.95 7 15 0.002 0.18 12.5 1.4 3 23 1777 1798 1775 1798 0.89 8 15 8.4 7.5e+02 1.1 0.5 2 22 1829 1849 1828 1851 0.87 9 15 0.91 81 4.2 0.2 1 21 1858 1878 1858 1879 0.92 10 15 0.05 4.5 8.1 0.9 1 20 1884 1903 1884 1907 0.88 11 15 0.2 18 6.2 3.7 1 21 1914 1934 1914 1937 0.94 12 15 0.097 8.6 7.2 6.0 1 23 2068 2091 2068 2091 0.95 13 15 1.4 1.3e+02 3.5 2.4 3 23 2098 2117 2097 2118 0.92 14 15 0.64 57 4.6 2.4 1 23 2174 2197 2174 2197 0.91 15 15 3.1 2.8e+02 2.5 0.4 3 23 2201 2222 2199 2222 0.90
Sequence Information
- Coding Sequence
- ATGCCGCGTCCTCGAATACTGAGCTCGTACAATTACAAGAGGCGCTACGACGACGAAATCGAAGAAAAGAATGTGCGCGCGTTGCGCAAACTCGATACCAAGAAACTTAAGAACGACGAGCCTGACTgcgagataataataatagacaaCGACGAGGGCAGCAAAGCCGCGAAGAAACATCTCCGCAGAACGACGCCGATGCCCGCGACGAAACAGATGAGACGCGAAGCTAGCGATGATCTTGAGGGATCTGAAAAACTGACGAGACGCATGCCGCCAGAGACTAAAGAAGCTGTAACGGCGGTCCGTCAAAATTCCTCTCTGTCGCTGCGTTTGGTGATGAACCCGACGAAAAATGCAGCGCGCCAAGAATCTGGCACTTCCGTCGCCACGACGCCTGTGAAAGTTCATCAGTTGACGCCAGTGCCAAGAATATCACGATTGGCGAGCAACTCTTCCGCTAAGATAGGCAAGTTGGAGTCCGTTTCTTCTCCGAGGCTTGCACACTCGGTGGCGAATTCTCCCATCGGAGTAACGCAATCGGTATCCAAAACGACAGCAACAGCGACGCAGTTGACGCCGCAGTCGTCCGCAACTTCAGTCCATCGTACACCGAGCTCAGCTGCGAAAGTATCGCAGTCGAGTTCGTCCGATGCGATACAACGTGTACCAGTCTCGGGCGTTACGATAGCGAGATCGATGAGCAACGCCGGTGCAGCAGGGACGTCGGTGAGCGTTGCGCAATTGGTAGCGGCTTCACCGACAGAGATATTGCGATTGGTGCCGAGTTCCTCGCCACACGTGATGCACTTGTTGGCCGATCAAACGCTCGAAATTGGTCGACTTTTACCAGACTCGAATAAACGAATACCGCAATTGGTTAAAATGCCACCAACGAGATCGTCGGCAACACCAGACTCGTCGATCCAATCGACGAAGTCTAAAACAATAACGGGAATGCCTAGAATATTGGACAACACGAGGATACAATTGCCAATGCGAATGATCAAAGGTCTCGACAATTCCAACATCGTCATGGTACTACCCGTTAGCGGTAAAGatacgaatatttttcaaaattcgtcCATTTGCACTCCCCAGAATGTTGAGAATTCGCGAGAGGTCGCTCGCGTTCAACAAGTCGTCGGTGTGCAACGTCAGCCGTCACAGAAAAACGGCAAACGAACGAACGAGGCAAAGGAAACGAGCGAGCCGCGCAAAAGAGACACTCATCGCGTATCGTTGTCCGATGCAAAGCCGAAGGAAGAGTTCTTTCCTGAAAGCAAAAAAAGTCTCATTTCGCGCGAGTCAACGAAGAATTCTTCCGGTATAGCGACACGTTCATTGTCAGCAGCGAAAAGCGTGATCGAGAAATCCAAGCACCACGCTAAACCAATTGAAGTGAAGAAAACACCGAGTAAGATTGAATCCTCGCGAAGCAGCGTGACTTCGTCGAGCCGGAAACGCTCGCTCGGTAATGCGAGTTCCGGCGATGCTTCGACTAACGTTGCGAGAACGAATCCCTCCGTGGCGACCAGCGTAAAGAGAAACGTCAGATTAGCCACGAAAGCGAATCAGAAGAAATCCAAGCTGTCGAACTTTGCGAAAACTCATGCTCGTCTCACAAAAGTATTGGCGAATCAGCCGATTCACACACCGAAAAACATTTGGCGTGCACGTTGTATCGTTTGCAAGGAACGTTTCACCGACAAATACGAGTTTCATCGTCACGCGAGTCTCTCGCATCCGGGCGTAAGAATCGTATTTTGCGAATTGTGCAGCGCATTTTTTCGCCACGACGACGAGCTCAGGCGTCATCGTATCACGTATCACAAGGTTATCGTGCCGAAAGACACGGAGTGCGCTTTCACGAAAGTCGAAAGATCGCGCACCGCGAGCACAACGACGAGGACCACGACGGAGAGTCGAGGAAAAAGTTTGAGAACGAAAATTACGAGTCTCGATGACCGCAGGCCGATTATCCGGAAAAAATCAACGATCGAGAGCGGCAATTCCGAGGCTGCTACGGGAACTTCGAGCGAGAATTTACGGGCTCGctcggcaagaaaaaaaatcacagtgtCCAGCGTGAGAACGAGAAATTTGAGAAAGTTGTCGCAACCCACGAGCTTGGTCGGACCCCGAACAAGGCAACTTCAGAAAATGAACGAGGCTCACTCATCAACTCGCAATTACGTCGACGTTGACGTAATCGATCATGACGCGACAGCTACGAAGAAGAAATTCAAGAGCACCGAAATCAAGAAATTGATCGTACCAATCGAGAGACTCGAAGGTGTCGCGCTCGAGAAATATATGTTTAAACTTGCGAAAAATCCGGTGACCGATTTTACCACGAGCCCAAAGAGTTCCTTGTCGAGCGAGGCGATAACCGGTGTCACGTCGAACGAGACGGAAACGTCTCGCTGCTCGGGCACAAGTAGCGCGAatgaaaaaatcgcaaaaccaTCAGCGCTTTCGGGTCttggaaaaatgagaaaaactcGTGGATCGAGGAACAGAGCAAGGAATGAACGAAATCATACGATTACTCGTAAAACAACGAATTTGAATATTCCGGCACAACCGCGAAGAAGCGCGAGACGgggcattgcgaaaaaatccTCGTCTAGCTCGGCCGACGAGACCACCGATGTCGAGGTCGTGGTAGTTCGTTCGTTGGATCATAACGAAGCATCAACGTCAAAGGGAATATCGGAAGTCAAGGAAACGATCGAAGCGGAAACGTCGATCACGATCGATGAATCAACGCAAGTAGCCGATATCGTCAGGGAACAACAAATCATAAGGAAACTCGTCTCAAGGTCATCGGCCTCGAGTTGCACGACCTTGGAACTCAATCGTGGCAAGGAAGACTCGAATAGGCTGAAACGAACGCGTGACAATTGTGATTCGGAGTCGTCTCACACAACGACGAGAAGAGCCGCAATGTACACAAGCAGCGACGAGAGTCCATCGAGCGCGTCCATCGAcgtgaaaaaattcttaactTCGAATCGTTCGATATCGAAGCAATTGTCTAGTAGCGACGACGCACCCTCGAGAAAATTCCTCGAGAATATAAAATCGCGAGATTTGTCTTTGGATTTGTCGTCGAGCAGCAGCGAGAGATTATTGCGAGGAGAAAGCTCGACTTCGCTCAACAGCGACGATACTTTATTCGCTCATAGACTCCGATCCGAATCGGCTCGATGTTCGCTCAAAATTCACGAGTTCGATAAAGTCTCGTCGAAACGTAACGAGATCGTGGAAAAACGTGATGGCGTACGACAAGAAAAGTCCAAAGAAAGTGACGAAAATGCTATGGAcgatgagagagagaaaaatcgtgaagaaaaaagaatggtGTGTGAGGCGGATAAGCCTGACGAGGAAAAGACGGAAAGAAATAATCAATCGAAGGATAGTGTAGATGGCGAGGACAATCAACGAAAAGACAATACTGACGGAGATGAAAAACAGACGGAAGAAAAATCCAATGGCGCGGAAAAACAATCGGAAGATAAATCAAACAGAATGGAGAAAAAACGAGATGAGATCgacgatgaaaatgaaaaatcgagagAAAGCCTCGAGGATCGGGACAAAGATCGAGACGAAAGTATGGACGATGACGAAGAATGTCGAGAAGAAACGTCACACGTGGATGACGAAGAAAACTTCACTGATGAGGACGAACCAATGAAAAAATGGTCGGACCGTTTGGAAAAACAGCCAAGGGAAAAAGCTAACATTTACAAACGatcgaaaagaaaattaaaagacTCCAACGATACAAGTTTCAACGATGACCGCAACGttgaagcgaaaaaaagagaaaccgaTGATCCGGAAAAAGCATCGTCCTCGTGTACATTTTCGAATTCACGAAAAACGTATTCGTGCagcaaaaaattgtcgaaaatcaCGAAAGAGCGGGACGAACGTGACGAGGATCAAATGGAAACGCCCCAAGATTTATGCTCCGTGTGTAAAGAATTGTTTAATCTGATGAAGAAAGTCTCGAGTGAATTGGGCGTGAGGAACAAAGCGGAAGTGCCGATAAAATGTCCACTCTGTCAACGCTACTTCATCTCGATGTTTCATCTCAAGTTGCACGTTGCCACGAATCATTTGCAATGTCCGAACAAGATAGCCTGCGAAAAAGCCAAATTATCAAGCGTCGATGAAACGTCGCGTTTCACCGAGCTCGATTGCGTGACCGTGCCCGATACGTTGCTCGAGTGTCCTCGTTGCGCGACTAAATTCGACCACGAACGTGACCTAAACGATCATCTCATTGTCCAGCACGAAACGATTCTTCCTAAGGATACGGCGAGCAACGAGTTACCGGAATATCTCAGAGATCTGCATATCGGTTGTATCGCGACGACTATTCGCAAAAGCGTTCACGTTACTTCGAGCCATGAAAAACAATCCTCGACCCTGGATTGCTCGCTCTGCGAGGAAAAATTCACTAAAACTGCGGAATACGTTCGTCACTTGCGCGTAATTCATCACAAAATAGTATCTGTCTCGTATTCCGATCAAAGAAACAATTCGCAAAAATCTTCTAACGACGCAGACCCGTGTTTCTCGCTGTACGGCTCACAGCCGGAATTCACGAGTACGCGAGACAACGAGGAGGCCGACGAAGCTGAGGAATCACCGCGACGCGACAGCAACGAACAAATGACGGCCGATCGCGCGTACGTGTTGAAGCAACTTTTGTCGGACGATTCGAGCGACGATACGAGGAAAGTATCGCGTCATCGTCGTAGCGGCGTGACGGCGAAAAGCGACTTTCCGTCATTGCGAAGAGACACGATCGTTGAAAAATCGGACGACAAAACAATCGTTGGTTACATATCGAACTTTCATACGTGCAGCATGTGCAATAAGAAATTCAGAAGGGCCCACGATCTCTTGATACACAGCTTGTATCACGCGGACAACGACACGTCGAAAGCCACTGGCGCAAACGTCGAGGATTCCGCCTCGAAAGAGAAGGAAAACGGCGAAGATACCGAGACAATTGATCGTCGCGTCGAATCTGACGACGCGATTGTTGTCTACGGGGCGAACGGAGCTAGTCAGAAATTCACGCGCGGCTCAAAGCGACGTGCAACGACCTCGTTGAACGCGTCGTCCTCGAAGATCGTCAAAGCTACTGTACCAAAGCAGCGCAAAGTAATGCCAGATAGTGACACGAGTCCCGCGACAACGGGCGAGCAATCACGCGACACTGACAAGGCCTCGATGGAGGAATTAATTGATACGTCATCAATTGTAATTGCCGAGGAAACGAACGCAAAATTGCCAATAGCTTGTGACAAGTGTAACCGTCATTTCGCCAATCGTTCGTTGCTGAACGAACATTTGTTCTTTCTTCACGACGATAATCTCAAAGATACCGTACTGACGGACATTCTCACCTCGAGTGGTACACGCCTCAACGAGAAGGAAAAAAGTCTCGATTCTTGGCGTTGCGATTCTTgcgaacaaaatttcaaattgttACCGGGCTACAGTCGTCACAGATACTTCGTGCACGGCGACGACACGATGGTGCACGTTTGCGAAAATTGCTCCAAGGTATTGACAAGCGTGACAATGGTAAACGTTCACATATGCGCGGACGTTGCATCGTACAATTGTCGCACGTGTGACGAAAGCTTCTCCACCGGTATGTCGTTGCGACTGCACAATACGGAAAAACACACGGAGACGATTGGCAACCACGAATGCGTGAAATGCGACAAGAATTTCTTGACGAACGCGATGCTCGAGCGTCATCTCAAGTGCAAGCATCGTTTCGTCAGGCCTCATCGTGCCAGAAGGAGCAGTCCCGTTCGTATGGCTACACCGGACACGACCAACGACGAGGAAAAATTCAATGAGCATGAGACACGAGACAATTCCGACAAGGAGATAAAAGCGAACGAGCCAGTTGAGACGAGACGCAGCAGATGGAGAGCTTGCAAAGGCAAAAAGATCGTGAGAGAACGAAGCCCGATTGCACCGAAGCGCCAACCCGCGTATCGACCACCCGGCAAGAGGAAGCGCGGCAGGCCGCGCAAATATCCAAGATCGGACGACGAGTCGTCCTATCGTGATTCGCAAGACGAGGACCAAGACGACGAAGCCTTGGATCTCATTGTTCCCAGACAAACGACACTGTACGTTGATCTTTCGGAAATTCATCAATGCAGCTTGTGCCAGCTCTATTGCTTCACAAAATCGACCCTCAGAAATCACATGACGAGTATACACTCGGTCACGAGTGAAATTTGCCAATTGTGCCAAAAGCCTTACACCCATGGTAAGCTCATGCGTCACGTGATCGATCATCACGTTACGTCGGACGACGGTAGCGTGCCGGAATTGGAAAAGCCTTGGTCCATCGTAACGAACAGCAACGAGATCGATACGGAGATATTGGTGAAGATGTTGGGTATCGATAGGCTCGTTTCACTGTGCGAGTATCGTCGTTACGCTGAAAAAATTGGCCTTGACACTTATCCCTGTCTATCCTGTAACGCTACATTTCGAAACCACGAACTTTACCGATATCACTTTTTGCTACAACACGATTCAATGTGCGCTCTATGCAATATCGAATTTAAGACGGGCCACGACGCGGCGAGGCACAAAAATGACGTGCACGGCTCGGTTGGACGTTACATATGGTTCGCCGATCGTACGGTTCTGGCAATGACATCGACGAAAAATTTTGCCGAACTCACCGATCGCATCTTCATGGAGAGATTGACCGGTGGAGGGATTGTCAATGAACAGGAGACGAAAGAGACAatcgacgatgacgatgacgacgacgacgacgacgacgacgacgatgacgtggACGATGATACGGAAGATTTGGATTATACGGAGATTCTCGTGTACGATAAACCGGGCAGTGGAAACGTCGCGAAGGATATCGCCGTACACGAGGATCACGGTATCAACCTGACGGAAGAAGTCGTCGAGACAGAGAACATCAATGATCGAGAAAGAAACGACGAGACGTTCAACCTCGCAGGACAATCCAGACTCGTCAACGACACAATTCCACCCGACGAAGTCTTTCGTACGACGAGTGCTTCAAATTCTAGCCTCGTACCAACGATCGCGAGGAACAAACGTACGAGACAGCTGAACGATTCGTATTCCAAGCTCAAGAATGTTCCGAGGATAATGAGCGTGGAAGAAAGGCCGGAAGAACATGTTGCTTCTTACGATTTTTCCGAGCCCGATGACGTTTGTCTGGTGATCGTCGTTACGGACGAGGATCTCGAAAGATTCAATATCGCAACTCCGCATCCGAATATATGGGGTCTTGCCGCAGAAATAAGCTCCACCTACGAGCACATCACACCGAAAGAAGTCAAACAAATGCTCGAATTTCACTTCGAGAGGCAGGAAGATTTCGACGCTTAG
- Protein Sequence
- MPRPRILSSYNYKRRYDDEIEEKNVRALRKLDTKKLKNDEPDCEIIIIDNDEGSKAAKKHLRRTTPMPATKQMRREASDDLEGSEKLTRRMPPETKEAVTAVRQNSSLSLRLVMNPTKNAARQESGTSVATTPVKVHQLTPVPRISRLASNSSAKIGKLESVSSPRLAHSVANSPIGVTQSVSKTTATATQLTPQSSATSVHRTPSSAAKVSQSSSSDAIQRVPVSGVTIARSMSNAGAAGTSVSVAQLVAASPTEILRLVPSSSPHVMHLLADQTLEIGRLLPDSNKRIPQLVKMPPTRSSATPDSSIQSTKSKTITGMPRILDNTRIQLPMRMIKGLDNSNIVMVLPVSGKDTNIFQNSSICTPQNVENSREVARVQQVVGVQRQPSQKNGKRTNEAKETSEPRKRDTHRVSLSDAKPKEEFFPESKKSLISRESTKNSSGIATRSLSAAKSVIEKSKHHAKPIEVKKTPSKIESSRSSVTSSSRKRSLGNASSGDASTNVARTNPSVATSVKRNVRLATKANQKKSKLSNFAKTHARLTKVLANQPIHTPKNIWRARCIVCKERFTDKYEFHRHASLSHPGVRIVFCELCSAFFRHDDELRRHRITYHKVIVPKDTECAFTKVERSRTASTTTRTTTESRGKSLRTKITSLDDRRPIIRKKSTIESGNSEAATGTSSENLRARSARKKITVSSVRTRNLRKLSQPTSLVGPRTRQLQKMNEAHSSTRNYVDVDVIDHDATATKKKFKSTEIKKLIVPIERLEGVALEKYMFKLAKNPVTDFTTSPKSSLSSEAITGVTSNETETSRCSGTSSANEKIAKPSALSGLGKMRKTRGSRNRARNERNHTITRKTTNLNIPAQPRRSARRGIAKKSSSSSADETTDVEVVVVRSLDHNEASTSKGISEVKETIEAETSITIDESTQVADIVREQQIIRKLVSRSSASSCTTLELNRGKEDSNRLKRTRDNCDSESSHTTTRRAAMYTSSDESPSSASIDVKKFLTSNRSISKQLSSSDDAPSRKFLENIKSRDLSLDLSSSSSERLLRGESSTSLNSDDTLFAHRLRSESARCSLKIHEFDKVSSKRNEIVEKRDGVRQEKSKESDENAMDDEREKNREEKRMVCEADKPDEEKTERNNQSKDSVDGEDNQRKDNTDGDEKQTEEKSNGAEKQSEDKSNRMEKKRDEIDDENEKSRESLEDRDKDRDESMDDDEECREETSHVDDEENFTDEDEPMKKWSDRLEKQPREKANIYKRSKRKLKDSNDTSFNDDRNVEAKKRETDDPEKASSSCTFSNSRKTYSCSKKLSKITKERDERDEDQMETPQDLCSVCKELFNLMKKVSSELGVRNKAEVPIKCPLCQRYFISMFHLKLHVATNHLQCPNKIACEKAKLSSVDETSRFTELDCVTVPDTLLECPRCATKFDHERDLNDHLIVQHETILPKDTASNELPEYLRDLHIGCIATTIRKSVHVTSSHEKQSSTLDCSLCEEKFTKTAEYVRHLRVIHHKIVSVSYSDQRNNSQKSSNDADPCFSLYGSQPEFTSTRDNEEADEAEESPRRDSNEQMTADRAYVLKQLLSDDSSDDTRKVSRHRRSGVTAKSDFPSLRRDTIVEKSDDKTIVGYISNFHTCSMCNKKFRRAHDLLIHSLYHADNDTSKATGANVEDSASKEKENGEDTETIDRRVESDDAIVVYGANGASQKFTRGSKRRATTSLNASSSKIVKATVPKQRKVMPDSDTSPATTGEQSRDTDKASMEELIDTSSIVIAEETNAKLPIACDKCNRHFANRSLLNEHLFFLHDDNLKDTVLTDILTSSGTRLNEKEKSLDSWRCDSCEQNFKLLPGYSRHRYFVHGDDTMVHVCENCSKVLTSVTMVNVHICADVASYNCRTCDESFSTGMSLRLHNTEKHTETIGNHECVKCDKNFLTNAMLERHLKCKHRFVRPHRARRSSPVRMATPDTTNDEEKFNEHETRDNSDKEIKANEPVETRRSRWRACKGKKIVRERSPIAPKRQPAYRPPGKRKRGRPRKYPRSDDESSYRDSQDEDQDDEALDLIVPRQTTLYVDLSEIHQCSLCQLYCFTKSTLRNHMTSIHSVTSEICQLCQKPYTHGKLMRHVIDHHVTSDDGSVPELEKPWSIVTNSNEIDTEILVKMLGIDRLVSLCEYRRYAEKIGLDTYPCLSCNATFRNHELYRYHFLLQHDSMCALCNIEFKTGHDAARHKNDVHGSVGRYIWFADRTVLAMTSTKNFAELTDRIFMERLTGGGIVNEQETKETIDDDDDDDDDDDDDDDVDDDTEDLDYTEILVYDKPGSGNVAKDIAVHEDHGINLTEEVVETENINDRERNDETFNLAGQSRLVNDTIPPDEVFRTTSASNSSLVPTIARNKRTRQLNDSYSKLKNVPRIMSVEERPEEHVASYDFSEPDDVCLVIVVTDEDLERFNIATPHPNIWGLAAEISSTYEHITPKEVKQMLEFHFERQEDFDA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -