Basic Information

Insect: Ophion ventricosus
Gene Symbol: -
Assembly: GCA_963932345.1
Location: OZ010715.1:27679102-27682860[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 9.4 8.4e+02 1.0 0.2 2 16 60 74 59 76 0.79

2 18 0.0065 0.58 10.9 3.1 1 23 312 334 312 334 0.98

3 18 0.0038 0.34 11.7 0.8 1 23 383 405 383 405 0.98

4 18 0.14 12 6.7 0.3 1 20 460 479 460 481 0.92

5 18 0.11 10 7.0 0.4 1 23 493 516 493 516 0.92

6 18 1.6e-07 1.4e-05 25.4 0.8 2 23 633 655 632 655 0.97

7 18 0.0034 0.3 11.8 0.2 1 23 662 685 662 685 0.97

8 18 0.008 0.72 10.6 0.1 3 23 695 716 694 716 0.95

9 18 0.00059 0.053 14.2 2.1 3 23 726 746 724 746 0.92

10 18 0.083 7.4 7.4 0.0 2 20 810 828 809 828 0.94

11 18 0.21 19 6.1 0.0 2 23 848 869 847 869 0.95

12 18 5.6e-05 0.005 17.4 1.3 2 23 890 911 889 911 0.97

13 18 0.002 0.18 12.5 0.2 1 23 931 954 931 954 0.96

14 18 0.24 21 6.0 0.1 3 23 987 1008 985 1008 0.94

15 18 0.045 4 8.3 0.4 2 23 1029 1051 1028 1051 0.93

16 18 0.37 33 5.4 0.4 2 23 1084 1107 1083 1107 0.93

17 18 4.9 4.3e+02 1.9 0.0 1 23 1112 1135 1112 1135 0.87

18 18 0.011 0.97 10.2 0.1 2 23 1166 1188 1166 1188 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	9.4	8.4e+02	1.0	0.2	2	16	60	74	59	76	0.79
2	18	0.0065	0.58	10.9	3.1	1	23	312	334	312	334	0.98
3	18	0.0038	0.34	11.7	0.8	1	23	383	405	383	405	0.98
4	18	0.14	12	6.7	0.3	1	20	460	479	460	481	0.92
5	18	0.11	10	7.0	0.4	1	23	493	516	493	516	0.92
6	18	1.6e-07	1.4e-05	25.4	0.8	2	23	633	655	632	655	0.97
7	18	0.0034	0.3	11.8	0.2	1	23	662	685	662	685	0.97
8	18	0.008	0.72	10.6	0.1	3	23	695	716	694	716	0.95
9	18	0.00059	0.053	14.2	2.1	3	23	726	746	724	746	0.92
10	18	0.083	7.4	7.4	0.0	2	20	810	828	809	828	0.94
11	18	0.21	19	6.1	0.0	2	23	848	869	847	869	0.95
12	18	5.6e-05	0.005	17.4	1.3	2	23	890	911	889	911	0.97
13	18	0.002	0.18	12.5	0.2	1	23	931	954	931	954	0.96
14	18	0.24	21	6.0	0.1	3	23	987	1008	985	1008	0.94
15	18	0.045	4	8.3	0.4	2	23	1029	1051	1028	1051	0.93
16	18	0.37	33	5.4	0.4	2	23	1084	1107	1083	1107	0.93
17	18	4.9	4.3e+02	1.9	0.0	1	23	1112	1135	1112	1135	0.87
18	18	0.011	0.97	10.2	0.1	2	23	1166	1188	1166	1188	0.96

Sequence Information

Coding Sequence: ATGAATGAGATAATCGAACCGCGAAATGTGGGAAACGTGTGCCGACTCTGTCTCTCGGCGCAGGAACCGAAGTCATCGGTATTCGCCGACGAGGCGATCGCCGGAGTGCCATTGGCCACGAAAATACAGACTTGCCTGTCAATCGAGATTCTCGTCAGCGACAGAGTGTCCACATCCGTGTGTTCCGATTGCTCCAAAAGGGTTGACGAGTGGTATACCTACAAGGAGTACTGTCTGCGTTCTCAGGAAAAGTTAAAGCAATGCCTGGCGGAGCCTTCGACGGACGGGGTTGCCAACATCAAGGCGGAACCACCCGACTACGAGGAGTCGCCGAGTCAGCTGGAGATGGCCAGCCTgagcgacgacgacgaagagcCAAGGAACGAGATACGGGAGAGACGCATAAAGCGAGAGGTGGAGGAGGATGACAAAGCGCCGTGCGTCAATTCGGCCGATGGCACACAGCTGCTGTTGAATCCTATGGCGGTCGGCGGTCACAGGGAagatgacgatgacgacgatgacgatgatgacggAAGGGAGCCAGATCCAACTGAAAAATTGGCTGCAGCTGCAAGCCGAAGGGGCAAAAGGAAGCGGGCGCGACGTGGCCAGCAGACACACTTCAGAGGTTCGCGTCGCTACAAACAGAGATGTTTTCACTGCCAGATATATCTCCATTCCAAGTGGAGTTACACCAAGCACACGGAACGCTTCCACAGCGGCGATATGGGCGTGGAACCACCGGTGACTGAGCCGCTGGTTTTACTAACGGAGAGTAGCGATAAAAAGAGAAAAGCTGCCGAGATGACGAGGGGCGACGAAATAGAGGACGTTGAGGACGTTGAGGACGTCGAGGATGAGCTGATAAGCCTGGAGAAGGATGCCCCTCTTACGCCTGTGCAGCGCAACATAATAAGCCAATTGAAGACCTTCTCATGTTACACGTGTGGACTGTGCTTCGCCGATCGTCGCACCACCTTGAATCACATACGCCAGCACATGCCCGATCTCAGACCTTACACCTGTATCGCTTGTCTCACCGAGTTCGCTGATCGTTCGGTGTACAAGTTGCACTGCGGCGCTTCGTTCGAGTGCGCGATGAAGATAGCTCTCGTGGTGCCCGAGCATGGTACAGAAAAGTACTTCACTTGCAACATGTGCCTGAGATCGTTGGCCAATAGGAAAGAGCTGCTGAGTCATCTGTCGAGACACTCGGACAAGCAGTACGAACAATTGACCGCTGcgccaccaccgccgccgcTGCCAACACCCCCGCCGCCACCACAACTTCCGGTTCCTGTCGCCAAGAGACGCAAGCTTTCGCGCGATCGCGTGATTCCCGCGCCTTACAAGAACGGCGATCCCGCTCACAATCACATGTGTCTCGATTGCGGAATGATTTATCGTTACAAGCAGAACAAATTGAAGCACGTTGCCTTGTGCAAAACATTGCCAGCCGAGAAGCGTTTGTGCTATCGATGCGTCGACTGCGGACTAACCTTTCTCGCTTTTAACAAATTTCAGTCGCACATAAGAGAGGCCCACGGGAAGCGGAAAATCGTGTGTCATCGGTGCGGCTGTAATTTCGCAGTCGATCATTTCTTGTCGCATTATCGGCAACATTTCGTCATGGATAATTCGCAGGAAAGCGAGGCCCAAGGGTCCCTCGGAATGGAGCGTTGGAGCAACGATACAATGGGagctacgacgacgacgacgtacAGACAATGGCCCGAAGGTTCAACGGCTGCGCTTTCTTACTCGACGAAAGCTCGTACGAGGCTGGTGGACGAGGAATCGAAGATGACCGGGCGCGAGGAGGGCGAGAGGCGAATGGCTCGCGAAAACGGACGTTACTCGATAAAAATGGATCCCGGTGGTAGTAACGACGTTGAGTGCCACGAGTGCGGCAAGGTATTCGCAAATTACACGAATTTGCGACGTCACGCGCGTACGGTGCACGAGGACGGGGTCGGGCGTTACAGTTGTTTCACTTGCGCCAAGACATTCGTGCGCGAGGAAGAATGGACGGAGCACGTAGAGACGGAGCATCGACGGGAGGCCGATCGTACTGAAATATGTCCAATGTGTCCGTCGGTCTTTGAGAGCCGGCAAGAGCTGCTTCTACATCGCCGGGCTGTTCACGGCTCGAACGGTGAGGATCGCCTCGCCTGCTACATATGCGGCAAGTGTTTCGCCAGCGAGACTTCCCTCAAGATTCATCGGGGTCATCATTTCCGGGTGAACTCACGGCTGAGCATCGGTGGCAAAAAGATTGCGGAGCGAGCGAGCAAGGGTCGTGCGAGAAGCGGCCAGGAGGGGGGGTTCGTCGGTTCGATGATGTCACCGAGGGCGAGGAAGTCCTTTCCCAACGGAGGCGGAAGCGGTGGCCCTACGGACGTTAGCCGATCGCGGGAATCCCTTCAGTGTCAGGTGTGCGACGTACGATTCGATAATGTCGCGGATCTCGGTCGTCACTTGTGGGACGTGCATTGTTCACGAGCGAAGCCCGAGAAGCCATTCACCTCGGACGAATTGCGCTGCGAGCTTTGCACGAACGTATTGCCGGACGAGGAGAGCCTGCGCAGTCATCTCGAGTGGCACGAGCAAAATCCAATTCTTAGTAACGTGAGACGGGAAAAACGCGAGCCCGACGTACCGGTAAGATGCGATCAGTGCGGCAAGTATTACAGCTCGATCGGTAATCTACGAAAGCACAAGAAACGTCACATCGCCAGAGGTTGGACGCTGGAGAGTAGCCGCGGGAGAAGGAAACGTCCGACCGGTTTTACGTGCGACGTTTGTCGCAAGATATTCGCAAGCAGATCGATACTTGCGAAGCATAGAATTTCGGCTCATCCGAGCCATTGCGAGCAAACACGATTCGACTCGTCGGCGTCGTCACCACCGCCGCTTCTTCCGTTCGTCCCTCGTGACTCGAAGAAATCACTAGCCTGTCATCTATGTGGCAAAATTCAAGCGGACGTAAGGGCACTAGCGAAGCATGCTCGTGTCGTTCACAAAATAAGCAACGCCGAAGCTATGATAGGCGAGCCAGCCTCACCGCCAGCGCCACGAGTCTCGTGTACCCTCTGTCCCAAGTTATTCGGCAACTTGGCCAACATGAGGCAACACTTTACCAAGGTTCACGGTAGGTCGAGAGTCGACAATCGAAACGCGCCACagcatcagcagcagcagcaacaacaacaacaacaacaacaacaacagcagcaacaggaGCTTCGATGCGAGGTGGAGGGTTGCAAGCGTACCTTCGAGTCTCGCCTCGCCAAGGTCAACCACGAAAAGACCCACCTCAACGTCGTTTACACCTGCGCTCTGTGTCCCCGCCACACCTTAAATCCCGGCGCTATGGCCGAGCACATTCTCGCTGCTCATCGTGCCAATCGCATCTCCGGTTACGACAAAATGACACTCTGCAAGAAGATGGACCTCGATAAATACGTCGTGATAGGAGCCAACGGTAGACAGTGTCCCGTATGCGCTATCACTTATCCCAATTACAAGGCTCTCAAGATACATTATCTCAAGATTCACGAGGACGAGGCCTCGTCGGTTTAG
Protein Sequence: MNEIIEPRNVGNVCRLCLSAQEPKSSVFADEAIAGVPLATKIQTCLSIEILVSDRVSTSVCSDCSKRVDEWYTYKEYCLRSQEKLKQCLAEPSTDGVANIKAEPPDYEESPSQLEMASLSDDDEEPRNEIRERRIKREVEEDDKAPCVNSADGTQLLLNPMAVGGHREDDDDDDDDDDGREPDPTEKLAAAASRRGKRKRARRGQQTHFRGSRRYKQRCFHCQIYLHSKWSYTKHTERFHSGDMGVEPPVTEPLVLLTESSDKKRKAAEMTRGDEIEDVEDVEDVEDELISLEKDAPLTPVQRNIISQLKTFSCYTCGLCFADRRTTLNHIRQHMPDLRPYTCIACLTEFADRSVYKLHCGASFECAMKIALVVPEHGTEKYFTCNMCLRSLANRKELLSHLSRHSDKQYEQLTAAPPPPPLPTPPPPPQLPVPVAKRRKLSRDRVIPAPYKNGDPAHNHMCLDCGMIYRYKQNKLKHVALCKTLPAEKRLCYRCVDCGLTFLAFNKFQSHIREAHGKRKIVCHRCGCNFAVDHFLSHYRQHFVMDNSQESEAQGSLGMERWSNDTMGATTTTTYRQWPEGSTAALSYSTKARTRLVDEESKMTGREEGERRMARENGRYSIKMDPGGSNDVECHECGKVFANYTNLRRHARTVHEDGVGRYSCFTCAKTFVREEEWTEHVETEHRREADRTEICPMCPSVFESRQELLLHRRAVHGSNGEDRLACYICGKCFASETSLKIHRGHHFRVNSRLSIGGKKIAERASKGRARSGQEGGFVGSMMSPRARKSFPNGGGSGGPTDVSRSRESLQCQVCDVRFDNVADLGRHLWDVHCSRAKPEKPFTSDELRCELCTNVLPDEESLRSHLEWHEQNPILSNVRREKREPDVPVRCDQCGKYYSSIGNLRKHKKRHIARGWTLESSRGRRKRPTGFTCDVCRKIFASRSILAKHRISAHPSHCEQTRFDSSASSPPPLLPFVPRDSKKSLACHLCGKIQADVRALAKHARVVHKISNAEAMIGEPASPPAPRVSCTLCPKLFGNLANMRQHFTKVHGRSRVDNRNAPQHQQQQQQQQQQQQQQQQQELRCEVEGCKRTFESRLAKVNHEKTHLNVVYTCALCPRHTLNPGAMAEHILAAHRANRISGYDKMTLCKKMDLDKYVVIGANGRQCPVCAITYPNYKALKIHYLKIHEDEASSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01102289;
90% Identity: -
80% Identity: -