Oven004832.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ophion ventricosus
Gene Symbol
-
Assembly
GCA_963932345.1
Location
OZ010714.1:8988085-8990490[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 3e-06 0.00027 21.4 1.0 2 23 420 441 419 441 0.97
2 13 2.3e-06 0.00021 21.8 1.1 1 23 447 469 447 469 0.98
3 13 1.5 1.3e+02 3.5 1.7 1 19 475 494 475 497 0.94
4 13 2.4e-06 0.00021 21.7 0.8 1 23 520 542 520 542 0.98
5 13 4.9e-07 4.4e-05 23.9 1.0 1 23 548 570 548 570 0.97
6 13 3.1e-05 0.0028 18.2 2.1 1 23 576 598 576 598 0.97
7 13 0.0022 0.19 12.4 0.4 1 23 604 626 604 626 0.99
8 13 5.2e-05 0.0046 17.5 1.1 1 23 632 655 632 655 0.92
9 13 1.7e-05 0.0015 19.0 1.3 1 23 661 683 661 683 0.98
10 13 0.00035 0.031 14.9 4.7 1 23 689 711 689 711 0.98
11 13 9.2e-06 0.00082 19.9 0.3 1 23 717 740 717 740 0.96
12 13 9.7e-06 0.00087 19.8 0.8 1 23 746 768 746 768 0.96
13 13 3.3e-06 0.00029 21.3 4.5 1 23 774 796 774 796 0.99

Sequence Information

Coding Sequence
ATGTCCAGCGGATGGATCCCTTCGAGAGTTTTCCTAGACGGCGAGTTGCCGGCGACGCTGGACGCGAGGTACGCCTCGATAAAGCAAGACGGAGCTTTTCTGCAGGGTTGTCGCCCGCAATGCATCGGTGCATTGAAGAGTCGGAGAACCGGCGAGCCCGGGAACGATACGAGCGTTCCGCTCGTCCCGGAAGCCTCTTCTCCTCTCGCTCCGGTAAGAATAAATCACAGAGCTCAGATAGACGTGATAGAGATAAAAGGAGAGGAGAAGGAGGCGAGCACGTGCCGCGTTCTCGTGTACGAGGAGCAACACACGAAATTGGTCGTTCTGAGGTCACTGGAGAGCGACGACGCGTGCGCGGTTGCGAGCGAGCTGGTCGACATCGTGACGACGATCGGTGCACCGCGAATAATTCAGAGCGGCAACGGTCGCGCGTACGCGGAGCGTGTCGTACGAGAAATTCGTCGCCTGTTGCGCGACTTTTGCGTCGTTCACGGTGACGCGACGCGAACGGCGAGCGAGGAACGACGCGACTTCCGGCTAATCCTACGGGCCTGGATGAACGATCATCCCGGCAGATCGTTGAGGGATGCTCTACGCGTAGTTCAAGTGGCCGAGAACACGAGGCCAAACTCACGCAACGGCGCTATACCCAGCCAATTGTTTTTCGGCAGAAACATCTGCGAGGATCTTTGTCGTACGATCGGCGCGAAGGGATCGAACGGTAATGTTTTCACGGCCAAACGAAATCCCAGGCAGGCCGAGCTGTCCCCTAAGTTCCGGCAAAAGTCGCCGGAGACGTTGGAAAACGCCGAAACAACGGACAATCGTGAGCGGGAGAAAATCGGGTGTGACGAACCCGTGGAGGGATCGGACGAGCGATCACGCACGAAAAGGgacgagaaaaatgaagaaaagggTTTGGTAGAAGGTGATGAAGAAAGCCATTTCATAGgaagaaacgaagaaaagtATTTTGTaagaagaaatgaagaaaaggaTTTAGAAGGAAACGACGAAAAGGATTTACAgggaagaaatgaagaaaaggtCTTAAGAGAAAAAGGTCCAGAGCGgcatacaaaaaaaacaaatgaagagAAAGGATCAAAAGAAACGAACGTTCGAGGCTCGAAAGACTCCGAGAATCGGCCCACCCGTCAGAAAATCAGCGTCAAGAAATTGTCCCGCAAAGCTTCGATAAAAAGTCATTCGCGATCGGCGGCTCGTGGAGCGACGAGGAACAATTCCCATCTCGAGTGTACGTACTGCAAGCAAGTTTTTAACTTCCCGAGTGTGCTCAAGAGGCACATGCGTTCGCACACGAACGAGAGGCCCTACGTTTGCGAGCTGTGCGACAAGAGTTTCAAGCAATTGGGACATTTGAGTCAGCACGCGTTAACGCACACGGACTATCGTTCGTTTCGTTGCGATCACGGTTGTGCCGTAAAATTCGATAGCCTCGAGTCGCTGAAGCTTCACTCGTGTAATTCCCGTAGGGAGACGGACGCAACGTTACCGCCGCCCACGGCAAAACGTCGCGATACCTTGCGTCTCTTCGAGTGCGACATTTGCAAAAAGATCTTCACGACGAAAAGCGTGCTCGAGCGTCACGTGTACACGCACACCCACGAGCGTAAATACGCTTGTAAGATTTGCGGCAAGAGGTTCAAGCAGGCCGGCCACGTGAAGTCTCACATGTTGGTGCACACAGGAGAGCgaaaattttcgtgcaacgtttGCTCGCGACGTTTCAGTCTGTCGAATTCTCTGAAGAAACACATGTACGTGCACAACGGTGACAAGCCTTATCAGTGCGACGTATGCGGCTCGAGATTTCTCGAGAAGCGCAATCTCAACGGCCACCTGATGACGCACACCAACGAGCGACCCCATTCGTGCAAAATTTGCGGCAAACGTTACACCCTCGCGGACACACTGAGGCGTCACGTTAGCGCTACTCACGAGGACGGACGCACGTATCAGTGCGAGATTTGCgcaaaaatgtttaaacaactGGCACACTTGTCCGTTCATAAGAAAGTCCACAATGACGAGAGACCATTTCAGTGTCATCTTTGCGAGAAAAACTTCAAGCACAAGAACGTTCTCAAATCCCATCTTGCCGTACACGCTAATGTAAGACCGTTCGAGTGTGATCTTTGCAAAGCTACGTTCGTTAGAAAGACCAATTTGCAGACACACATTGCTTCCGCTCATATGAACGAACGGCCTTATGCCTGTACCATATGCAACAAGCGGTTCAAACAGATCAGCCATCTTAACGGTCATATCGTTGTTCACAGCAATTCGATGCCGTATCAGTGCGATTTTTGCGATCGTCGCTGCAACCGACTGGACAATCTCAAGAAACACATGAGGCTCCATACAAAGAGCAAAGAATGA
Protein Sequence
MSSGWIPSRVFLDGELPATLDARYASIKQDGAFLQGCRPQCIGALKSRRTGEPGNDTSVPLVPEASSPLAPVRINHRAQIDVIEIKGEEKEASTCRVLVYEEQHTKLVVLRSLESDDACAVASELVDIVTTIGAPRIIQSGNGRAYAERVVREIRRLLRDFCVVHGDATRTASEERRDFRLILRAWMNDHPGRSLRDALRVVQVAENTRPNSRNGAIPSQLFFGRNICEDLCRTIGAKGSNGNVFTAKRNPRQAELSPKFRQKSPETLENAETTDNREREKIGCDEPVEGSDERSRTKRDEKNEEKGLVEGDEESHFIGRNEEKYFVRRNEEKDLEGNDEKDLQGRNEEKVLREKGPERHTKKTNEEKGSKETNVRGSKDSENRPTRQKISVKKLSRKASIKSHSRSAARGATRNNSHLECTYCKQVFNFPSVLKRHMRSHTNERPYVCELCDKSFKQLGHLSQHALTHTDYRSFRCDHGCAVKFDSLESLKLHSCNSRRETDATLPPPTAKRRDTLRLFECDICKKIFTTKSVLERHVYTHTHERKYACKICGKRFKQAGHVKSHMLVHTGERKFSCNVCSRRFSLSNSLKKHMYVHNGDKPYQCDVCGSRFLEKRNLNGHLMTHTNERPHSCKICGKRYTLADTLRRHVSATHEDGRTYQCEICAKMFKQLAHLSVHKKVHNDERPFQCHLCEKNFKHKNVLKSHLAVHANVRPFECDLCKATFVRKTNLQTHIASAHMNERPYACTICNKRFKQISHLNGHIVVHSNSMPYQCDFCDRRCNRLDNLKKHMRLHTKSKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01100784;
90% Identity
-
80% Identity
-