Oven004880.1
Basic Information
- Insect
- Ophion ventricosus
- Gene Symbol
- -
- Assembly
- GCA_963932345.1
- Location
- OZ010714.1:9326769-9327397[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.8e-13 8.1e-10 38.4 0.1 5 42 1 37 1 40 0.92 2 2 7.1 6.6e+03 -2.9 0.0 36 43 94 101 93 102 0.77
Sequence Information
- Coding Sequence
- ATGGAGCGAGCTGTCAATGCGGTCAAGGATGGGATGTCCCTGCGCAAGGCGGCCGCAAAGTTTTCCGTGTCAAAATCGAGTCTTCATCGTTACGTGCATCTGGGAATGCCGCCGCAACGTCAACGTCACTGGATCTACCGATGTCCCGGCTGCGGCACTTCGCATCGTCATAAGAAGAACCTCCTACGACACTTGGCGGTCGAGTGTGGCAAAGATCCAGGATTCAGATGCGGCTACTGCGAGCACAGATCAAAGAGAAAGGGAAACGTTGTGGCTCACGTTAAGAGAAGACACCCGGGACTCGAGATCAAATGGATGGtgaaaaatatcttgtaa
- Protein Sequence
- MERAVNAVKDGMSLRKAAAKFSVSKSSLHRYVHLGMPPQRQRHWIYRCPGCGTSHRHKKNLLRHLAVECGKDPGFRCGYCEHRSKRKGNVVAHVKRRHPGLEIKWMVKNIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -