Oven011635.1
Basic Information
- Insect
- Ophion ventricosus
- Gene Symbol
- ttk
- Assembly
- GCA_963932345.1
- Location
- OZ010719.1:14202831-14210398[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-15 1.3e-12 47.3 0.0 1 45 357 401 357 401 0.97
Sequence Information
- Coding Sequence
- ATGAGTTTCGCGCCGGATCAGCTGTTTTGCTTGCGCTGGAACAACCATCAGGCGAACATAGTCGAGGTTTTCGACAAGCTATTGGAGAACGAGACTTTCACGGACGTTACGTTGGCGGTCGACAACGGTGTATTCGTAAAATGTCACAAAATGGTACTTGCAGCTTGTTCGACATATTTTCAGGGCCTATTTACCGAGCTACCGTGCACACATCCAATAGTAGTCCTCAAGGATATAAAGTACGCCGAGATCAAAGAGATACTCGAGTACATGTACACGGGGGAGGTAAAAGTGGCGCAGGAACACTTGGCGCAATTCGTAAGGATCGCTAACATACTTCAAGTTAAGGGACTCATGTCCGACAGCACATCGTTGACCATCTCGAAACTGATAACGCACAACGACGAGGTCATAAGTACGAGTACACTTAACAATCCCGATCAAATACTCGAGAGCAACGGTGGAGGAGCAACTACTGCCGGACAATTATCGCCACCGCACTCGACGAGCTCGCCCTACTATGGTTACGGAAAATCTCCGACAAGACGAAATCAACGACCAAACGTTCCTTTACCAATGTGGCCACTGCGTCCGGGACAAAATTCCGCGGTTGACTTGGCCGCCCTTCAGTCCTCTCTATCGATGAGACACTCACTATTCGCCTCACAATACGACAATACCATCGAGGCAACGACCACTCACAGTCGCAAGAACAAAACGAACGGCAACAACAGCAACGGCACCCCCAGCGCATCGAGAAATCACGATACTCCCATACTGCGAAATGTTCTTGGACAGGGTCACGTGGATAGCTCTCACAGTCATACGGATGCACAGGAGTATCGTACTCACAGCAACGATTCGGCCAACAACGATAACGAGCTGAGACGCACCAGTATGGACGCTGCCAATCGTCCAACATCCCACAGCCCGTACGCCAATGACGCCTCGATGTTGGAAGACGATGACAAAAAGACCTCACTACCCTCGTACGCCGATGACGCGAAAGCAGGTATAGCGAACTACGCGCCAGCCCAGAAGCCCGAATGGAAGCGTTACAAGCAGTACACGAGGGACGACATATCAAACGCAATCGAGGCCGTGAGACGAGGCATGAGCGCGCTCCAGGCGGCGAGAAAGTTCGGCGTACCCTCGAGGACCCTCTACGACAAAGTTAAGAAACTCGGTATAACGACGTCAAGACCCTTCAGACGCAGTTCAAACAGCAGCGGTGCTTGTTTCCCGTACGGCGTTGGTGGCAACGTTAACGGGAGCATTTACGGAACGATATCCGAGAGCGAGAACGACAACAGCAATGTACTGATGGACAATCCTGCCGCTTTATTGGAGACCGCATTCGCGGAGAGTCGCGGTGACGACTCGAGGGATCGCGAGTCAATGATGGATGTTGCCCACCCTGACAACACTCCGAGCCCTCAGCCGTTGCCGCCCTACGCGCATCGTCCGATCTCGTCCGCCGAGGAAACACCGCACCAGGATACGACGGAGGACATGGAGGACCAGGTCGAGGATTTGTCGGTCAATCGTAGGACTGACGTACGCGTCATAATGTCACCGAACGTCGCCATCAAAGAGGAAAACTAA
- Protein Sequence
- MSFAPDQLFCLRWNNHQANIVEVFDKLLENETFTDVTLAVDNGVFVKCHKMVLAACSTYFQGLFTELPCTHPIVVLKDIKYAEIKEILEYMYTGEVKVAQEHLAQFVRIANILQVKGLMSDSTSLTISKLITHNDEVISTSTLNNPDQILESNGGGATTAGQLSPPHSTSSPYYGYGKSPTRRNQRPNVPLPMWPLRPGQNSAVDLAALQSSLSMRHSLFASQYDNTIEATTTHSRKNKTNGNNSNGTPSASRNHDTPILRNVLGQGHVDSSHSHTDAQEYRTHSNDSANNDNELRRTSMDAANRPTSHSPYANDASMLEDDDKKTSLPSYADDAKAGIANYAPAQKPEWKRYKQYTRDDISNAIEAVRRGMSALQAARKFGVPSRTLYDKVKKLGITTSRPFRRSSNSSGACFPYGVGGNVNGSIYGTISESENDNSNVLMDNPAALLETAFAESRGDDSRDRESMMDVAHPDNTPSPQPLPPYAHRPISSAEETPHQDTTEDMEDQVEDLSVNRRTDVRVIMSPNVAIKEEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01100727;
- 90% Identity
- iTF_01102184;
- 80% Identity
- iTF_01103674;