Basic Information

Gene Symbol
ct_1
Assembly
GCA_963932345.1
Location
OZ010716.1:21505665-21530387[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.2e-27 6.1e-24 84.0 0.0 2 72 552 623 551 628 0.95
2 3 2.1e-32 1.1e-28 99.2 0.0 2 77 961 1037 960 1039 0.96
3 3 2.5e-31 1.3e-27 95.8 0.0 3 76 1198 1272 1196 1275 0.96

Sequence Information

Coding Sequence
ATGCATTctctcgacgacgacgacgacgacaacacgGGTACGAGCGATCCCGAACGGAGGGTGATGAAAAAGCGTTGCAGGGAAAATAATGCCGTGTGTATGAAGATCAGCCGATTGGTGGACGAGGTCTCAAGGTTACAGCAGAGCCTGCAGCGCCTTCAGGAAACGAGCTCGCAAACGACGTCGCGCCTCGAGGAGGAGCTCGAGGCACGGCGACAGCACATCACCCGCTTGGAGAGCAAACTCGAGCGTCAGCGAGACTACGAGGATATCAAGCGTGAGATAAGCATTTTGAGATCGGTCGATCTGTCGCAAATACCGACCGGCGAGCCCGGCAAGAGCCTCGAACATCTCCTAATGGAAAGGTCGAAAGCGTTGCAACAGGCCGAGACACTCAAACCACCGAGCACTCCGGATGCACTCGGTGGACTAGCCTCACCCCTTCAGCGCGCCGCGACCGCTTCACCCCACGCACTCGTTGGTGGTGTTGGTGGTACCGCCGGTGTCGTGACTGGTGGGAGTGCTGCGCCGCCACCCGCGTCCCTCGTCTCCTGTTCCCAACAAGCAATCCCGACGCGCTCGACCCCGACACCCTCGTCGGCTGCCTCGACCGCCTCGAGTCTCCTATTCCCGCCACCTCTCCAGAACGTCGAGACCTTTGGCTCTTTCCTCGGCGAGGAGATCGTCGCCAACTGGAGGCGGTCCCTGGAGAGATCGATCATGagccagcagcagcagcagcagcagcaacagcaacagcagcagcagcagcagcaccaaCAACAGCACCAACATCAAGcccaacagcagcaacaacaattgCAACCACAACAACAATCGCACCTACAGCAACAAGCACTAACGTTGCAATCACAGAACCAAGCTCTCTCCCAACTCCAGCAGTCACAGCCAGTTGTTGCTGCCGCTGCTACTGCTGTTGCGGTGCAACAGGCGCTGCATCATCAACAATCAATGCACACGTTGCATCAACCAGTGACGAACCTAAATCACCTTCCATCGCCAACAGATAATCCAGCATCGTCGGCCTCGTTAACGAACACACCGGCGAAGTCGATCACCCCCCAATTGGGCGGTAGCAGCCTGACAAGTGGCGGTGGTGCCAGCGGTGTTTGCCTCGACGCAACGGAAAAGGCACCAACGCCGATACCCGGTCACGAGACTCCCGCACCACCCACGCCATCCTCGACCGTGGCACTGACGTCGCCCTCGATACCGATGCCCGTAAACGCTCTACAACCGCTAACGCCCCATTCCGCCTCGACCACCACGACCACCATCCTCGATACGTTACACACGACCAACAGTGGCATCATAAACGGCTCGAGCATAGGAATGTTGCCAGGTATAACAATGCCGACGTCGCTTCCACCCAAGAGTCCTCAGGAGGAATCCtgtcacaacaacaacaacaacagccaTCACCTAGCCAATAACAATATAGGCGGCCTCGGTGTACTCGACACCCTCAAGAGTCCATTTCGATTCGACGATCGGACGCATCCTTTCCGATTCGGCGATGAGTACGGGGCTGCCGGTATGGCCGGAAGACTCGGCGAGTCACTCATACCTAAGGGCGACCCGATGGAAGCAAGACTACAGGAGATGTTGCGCTACAACATGGACAAGTACGCGTCGCAAAATCTCGACACCCTTCACATTGCGAGGCGGGTCAGGGAATTACTCTCGATACACAATATCGGACAGAGGCTCTTTGCTAAATACGTGCTAGGACTTAGCCAGGGCACGGTCAGCGAACTACTCAGCAAGCCAAAGCCCTGGGACAAACTTACGGAGAAGGGACGCGACAGCTACAGAAAGATGCACGGATGGGCTTGCGACGAAAACGCCGTGATGCTACTCAAATCGCTCATACCGAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGTATGCCAGCATTTGGACGTGCACCACAGGACGGTGGTACGACAGACATGAGCGACGAGAGGCTCGCCCATATACTCTCGGAATCGGGACATCTGCAGATGAGCAGAAGCGAGCACGAGACGTCCAACGACGCCGACAGCAAAAGTCCAAGCAGACTCGGCTGCCCGAGCCCCTTCGGCAAGGACCGTATGGACAGCCAGAACAGAAGACTGAAGAAATACGAGAACGACGACATTCCCCAGGAAAAAGTTCTGCGAATATATCAGGAAGAGTTGGCCAAAATGATGGGGAGGAGAACCGACGATCTACGGGGCCCGCGCGACTTTCCACCGAGCGCGATGTTTCCGCACTTTTTCAGCGGTGCCCAGGGTCTTCAAGGTATCGAGCGCACGCAGGAGGACATAAGAATGGCACTGGACGCTTATCATCGGGAATTGCAAAAATTGAACGTAACACCCGGTCAAAATCCAGCGTTGGCAGCGTTGCCAGGACTGCCGAATATACCGGGTCTTCTGGCGCTGCAGCAACACGCACTTCAGCAGCATCACATGGCGGCCAATGGTGGTGTCGTGCAGGATCTCAGTTTGGGAAAAATCGATCCGCGCAACAAAATGATGAACGGCGTTACGGAGGATGACAAGGACAAGATGGAGGAAGCGATGAGGCACGCGGGTAGCGCTTTCTCGTTAGTCAGACCGAAGCAAGAGCCGAGCGGGCCCCAATCGACACCTGGTGGCTCCAGCGCAAGTTCGCCCCTCGGTAATTCTATATTACCACCGGCAATGACACCGAACGAAGAATTTTCGGGCGCAGCAGCGGCGAGTCCACTCCAGAGAATGGCATCGATAACGAACAGCCTGATAAGCCAGCCCTCGACGCCCACGCATCATTCAACCAGCCAACGACCCCTCAAAGCCGTATTGCCACCGATAACCCAGCAACAATTCGACATGTATAACAACCTCAACACCGAGGACATCGTCAAGAGGGTGAAGGAACAGCTCTCGCAGTACTCGATCTCCCAGCGTCTCTTTGGCGAGTCCGTGTTGGGTCTGTCCCAAGGCTCGGTATCGGACCTCCTCGCGAGACCGAAACCTTGGCACATGCTCACGCAAAAGGGTCGCGAACCGTTCATAAGAATGAAAATGTTCCTCGAGGATGACAACGCCGTGCACAAATTAGTCGCCAGCCAGTACAAAATAGCACCGGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCATGCGGTACACCGATGAAGCCAATGCCACCGACGAAATTGGTGCAGGAGCAATTGCAGAACGCCGCGAAGGCGCAAGCGGCGGCACAAGCGGCGGCGCAGGCCGCGGCGGTTGCGCAACATCAGCAGGACAGTCAGCTGCAGTTGGGTCCGCCACAACCGAGTCCGCAGCATCCGGCTCACGGTCAGCAGCCGACCCCGTTGATCCTGACGCCACCGGGGCCTCATCATCCTCACGGCCAACTGAGCATACAGGATTTGCAGAAGAAGCAACAGCACcagcagcagcagcaacagcaacagctgGGCCTACACTCGCCGCATCATCAGATGACGCCGTCGCCGTTGCGAAACCTTCATCAGCACATCTCACCGAGCGTCTACGAGATGGCGGCGCTCACGCAGGACTTGGACACCCAGACGATCACGACAAAGATCAAGGAGGCACTTTTGGCGAACAACATAGGCCAGAAGATATTCGGCGAGGCGGTGCTCGGGCTGTCCCAAGGCTCGGTCAGTGAATTGCTCAGCAAACCGAAACCCTGGCACATGTTGAGCATAAAGGGAAGAGAGCCTTTCATAAGAATGCAACTGTGGTTGTCGGATCCGCACAACGTTGATCGACTGCAGGCGTTGAAGAACGAGAGACGAGAGGCGAACAAGAGACGACGCAGCAGCGGTCCAGGCCACGACAACAGCTCGGATACCTCGAGTAACGATACAGCGGAGTTCTATCATGCCTCGTCACCCGGCCCTGGACCACCGTCCGCCAAGAAGCAACGCGTACTGTTCTCCGAGGAACAGAAGGAAGCCCTCAGGTTAGCTTTCGCACTGGATCCTTATCCGAACGTGGCGACCATTGAATTTCTCGCGGGCGAGCTTGCCCTCTCCTCGAGAACGATCACCAACTGGTTCCACAACCATCGCATGAGGCTCAAGCAGCAAACGCCTCACGGACAACCGGAGCAACAATCGCCACGCGAGCCCGGACAACCCTTCGATCCTGTACAGTTCAGGCTACTGTTGAATCAACGTTTGCTCGAGATACACAAGGAACGTTTGGGTATCGGCAACGTGCCGATTCCCTACGGACCATACTTCAATCCCAGCATCGCGACCCTCATGAACAACGCCCTGAAGGAGCAATGTTCCGGCCTCGATCTCTCGATGGGCACCCTCAAGCGGGAACCGAATCAGGAATTTGAGGACGACGACGGGGACGACGCGATGAGCAACCTCGGTAGCGAGGACTCCGAAGGCTCGGCGGGTAGTATGAAACGCGGCGATACGACGGATCTCAGTCAACAACCGTCCCAACCAACGACCGCAAGATCGAACAGGAGAAAACCCGCGGCCCCTCAATGGGTCAATCCCGAGTGGCAGGAACCACCGAGAACCGGCGACGAGGTTATAATAAACGGCGTTTGCGTTATGCAGACAGACGACTACGGCGTCAAGCGGGAAAACGAGGAGACCGTCCGGGTCGAACCGACACCCGTCCAGGATCGTTACGACGATGACGCCGCGAGTGACGTATCCTCCGTCGTTTCCGCCAATAATCCGCAGGATCGCGAGAGCCCGTTGCCCAGCCTCAAGTCACCGCAGAACACACCATCCACCTCGCCGAGACCACCGTCGTCATCGCAACAGCAACAAACGCAACAACAAACCATCGACGAGGAAATTCCCACCAAGGACATCGTTAAAAACGAACCCGAGGAAACGTGGGACTATTGA
Protein Sequence
MHSLDDDDDDNTGTSDPERRVMKKRCRENNAVCMKISRLVDEVSRLQQSLQRLQETSSQTTSRLEEELEARRQHITRLESKLERQRDYEDIKREISILRSVDLSQIPTGEPGKSLEHLLMERSKALQQAETLKPPSTPDALGGLASPLQRAATASPHALVGGVGGTAGVVTGGSAAPPPASLVSCSQQAIPTRSTPTPSSAASTASSLLFPPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQQQQQQQQQQQQQQQHQQQHQHQAQQQQQQLQPQQQSHLQQQALTLQSQNQALSQLQQSQPVVAAAATAVAVQQALHHQQSMHTLHQPVTNLNHLPSPTDNPASSASLTNTPAKSITPQLGGSSLTSGGGASGVCLDATEKAPTPIPGHETPAPPTPSSTVALTSPSIPMPVNALQPLTPHSASTTTTTILDTLHTTNSGIINGSSIGMLPGITMPTSLPPKSPQEESCHNNNNNSHHLANNNIGGLGVLDTLKSPFRFDDRTHPFRFGDEYGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKEYVSGKEQGMPAFGRAPQDGGTTDMSDERLAHILSESGHLQMSRSEHETSNDADSKSPSRLGCPSPFGKDRMDSQNRRLKKYENDDIPQEKVLRIYQEELAKMMGRRTDDLRGPRDFPPSAMFPHFFSGAQGLQGIERTQEDIRMALDAYHRELQKLNVTPGQNPALAALPGLPNIPGLLALQQHALQQHHMAANGGVVQDLSLGKIDPRNKMMNGVTEDDKDKMEEAMRHAGSAFSLVRPKQEPSGPQSTPGGSSASSPLGNSILPPAMTPNEEFSGAAAASPLQRMASITNSLISQPSTPTHHSTSQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAVAQHQQDSQLQLGPPQPSPQHPAHGQQPTPLILTPPGPHHPHGQLSIQDLQKKQQHQQQQQQQQLGLHSPHHQMTPSPLRNLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDPHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHASSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEQQSPREPGQPFDPVQFRLLLNQRLLEIHKERLGIGNVPIPYGPYFNPSIATLMNNALKEQCSGLDLSMGTLKREPNQEFEDDDGDDAMSNLGSEDSEGSAGSMKRGDTTDLSQQPSQPTTARSNRRKPAAPQWVNPEWQEPPRTGDEVIINGVCVMQTDDYGVKRENEETVRVEPTPVQDRYDDDAASDVSSVVSANNPQDRESPLPSLKSPQNTPSTSPRPPSSSQQQQTQQQTIDEEIPTKDIVKNEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01394913;
90% Identity
iTF_01103433;
80% Identity
iTF_01103433;