Basic Information

Gene Symbol
ARID5B
Assembly
GCA_963932345.1
Location
OZ010720.1:6882907-6891325[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.4e-23 1e-19 70.9 0.0 2 89 235 320 234 320 0.95
2 2 9 2e+04 -4.6 1.5 12 29 1021 1038 1016 1039 0.63

Sequence Information

Coding Sequence
ATGGCTGACGACGTTGAGGACGAAGTGCTGACGATCTCGGAAAAAGTGGTAGTGAGAGTACACGATCTCGTGACTTGGCTCTCGCCGTCGGTCGAGTGGTCTTGGGGCCGTGAAGTTTCGCTTCCTACATCGCCAAAGTCATCATCCTCGGAAGGAAGTCCGCAAAAGCTCGAAGGAAATTATCCACAGGTACTCACGGATCCGGGAATTGATTTCACGGACGTTGACAAACAACAGAAGGAATTTGAAACGAATCTCAGCGGGCCGAAGAGGCAGGATGAGGACAATACGTATACGACGCAGCCGAGGGTTGTCGTACTTTCGTACCCGAGGTACTGTCGTTATCGTGCGCTTTTGCGAAGGCTCGAGGGCGCTGAGCCCTCATGGTTTTCGTCCTCAGTCGCCGCCGCTCTCGGTGGTTTCACAGCGCTTCCCGGCACAAAAGTTTTGTTCTGCAGAGATACCTTCGACTATCCCGACCTCGAAACGCACGAGCTTCTCTGCAATCACTTAGctCCAAAACTTAAGGGGAGGCCGAGAAGAAAGCGAAAAAAGCGTAGCGCTTCCCCTGGCGAATCGAGCAACGAGAGCGAAGCCTCTGTCGCTTCAACGTCGAGGGGAGCTATCTCGAACCTGAGCCTTGCTCCTGCACTGAGACCACCGTCGGGTGTTCGCCGCAGTGAGAGAAATACGTGCGGAGAGGAAAAAAGATTCCTTACGGATGTTCACAGTTTCATGAGATCGCGGGGCACACCCGTTGGAAAAATGCCGTTGCTGGGTTACAGGCAAATCGATCTCTTtctattttatacaaaagtacAGAAGCTCGGAGGTTACGATTCCGTCAGTGGTGGTCGTCTGTGGAAGTCCATTTATGACGACATCGGTGGAAACGTTGGCTCTACAAGTGCCGCTACGATAACGCGGCGACACTACGAGCGGTTGTTACTGCCGTACGAGAGGCATCAGCGAGGTGAGGAGACTAAGGTGAGACCTGCCTACGGTAGGCGCCTGAAGTGTAGAAGTTTATCCGGAGATTCGATCGAATTGAAGCCGGAAATCGGAAGGATATCCACATCCGAGACCCCTCCGCCACCGGAAGCGCCTACGGTCGCTTCGCCGGTACCACCTCTCCAGTCAATTTTATCCTCAACGcCTTTCCTACCCGGCGATAAGCCAAAGACTGAGGGCGGCAAGACATCGTCCCTGCGTAGCGTTAGAGTGAAACCGGAACGATTGAAATCGTTGAACACTATAATAGCGAATAGTACACCGGTAGTAAATCAAAATAGTAGTCAACTGCCAAGCCCGAGTCCGCCACCTTCGTCGAACGCGTCGTCGAGCAGCACTTCAACGTCGAACACACCGAGCAGCACGCCGTCGACGACACCGACGAGCGCGGCCGGCGTTGGGGCCGTTACGATTGGTCAGAGTGTACTCGAACGTCAGCTGAACAGTCCGTTAATTTCCCAACAAGTGCCACCGGCCTCGACGTCGCCGCCGCCGAGTTTGCCCGTTATCGCAGTGACAACGCACTCGACGGCGATCGTCACGCTCACACCTCCACCGGAAAAGGACATGAAGGAGATGAAGCTCGATCCGAAACCAACGAGTCTTCTAGCTCAGGGCAAGGAGAACATACCGATATTCGGCGAGAAGCCGATTTTTGCGGAAAAATCTTTGCCCCCACCGAAATCACCGGAAGTAATCGATCTTGAGATGGAGAACGACACGAGTCGCGACAAGATCGTCATACCGAGTTTTAAGAAGAGAAAATTGGAGATACTCCGAGAGGGCGGGCTTGAAGTTACCGCGGTCGATTTGGACGCAAGGCCGAGTGTTATCCAAGCGACTATCGTGCCCGTTACAACGGTGTCAGGCCACGCGACGAAGATCGACGAGACGAACGACCAGTCATTCTCCGCCCCGACCACGCCGAATTCTGTACCTAAATTGATATCCGTCACGGTTACGCCGGATATCGGTCATATGTTACCCTCACATCAGGAACAATCGATCGTCAATGGAAATTCTCACGTTCATCCTCAAACGAGGCCATCGGCAGTGAAATCCTCGTCGAATCGTTCGAATCTTCAACCGCCGACGCCCCAAACGAACAAAAGCAGCGCccacaacaataacaacaacaataacagtGCATTCGCTAACAACACCGGTAACAGTCGAGTGATCAACGTTGGAAGTCCGAGTAACGCGAATCTGTTGCAGCTCTATGCGAATGCGACGAACGCCGCGCAGCCTAACCAATCGTCTCCGCCACCGGTTAATCATCGTTTCGTACCACCTTCACCGACGAACGATAGGCAAGCGACGGCGCCCCCCAAAGTTACCCAATCGCGCTCGATTTTCGCTCACAACGAGAAAGTCGTTTATGGCAATCCCAAAGACATTCTGATACCGCACAACTATCATCATCAGGTATCATCGCAGCATCAGCAATCACCCCACACCGCGAGCAATACTAACACAACGACGAACGCGAGCGCGATCCTCGATCTCACCCAGAAACAGGTGGATCGTGCTTTCGCACGGCCGAACCTCGAGATCGTCCGGGTGCCCGTCGTGCCGCGTACGAATCCGCTGAATCTCGATATGAAGAATACCATCGCAAAGGAGAAGCTGCAAGAAGCAAACTCGCGAAAAGCAGCCGTCTTTCCCGGCTACGCCGGTATGCTCGATAGTCGAACAATGGCCTCGAACAATCTCGAGATAACCCTCGTTAGTCCGAAGCACCGGGGTCATCCACCCACACCTCCGCAAGTTCATCAACGACCTACGAGTCCTCCGATCGCCAGGCTCCAGAACAATAGCAATAACAATGTTAACAACGCCACGTGCAACAGTCCGAATAATACCGTTACTAGCCAACAGAGGCGTCATCAGAACGGCAAATATCCTTCCAGGCTGGAGTCAGTTCCGCAGTACGCCTCGAGAAAGCCTAGTCATCAGCCGATTATCCCCAATATACCGAATCTTCACAATCTCAATAATACGTCGTACACATCCTTGAAGACGAGCGCGATACACCGACAACAGCAGatgcaacaacagcaacaacaaccaCCGCAGCACCAGCCACAAGTGCAACAACGTCAGCAAAAGCAAGAACAAGAACAACCGGATAAACAGCAAACGCTTGCCGACAACAGGAAAACGACCGGTGAGTCGGTGAGCCAGGAACAGCTGAATAATCATCAGCGACGCATAAGTGAGAGTGACAAAACATCGATTGTTGGGCAGCAGCAACATCAACACTTGCACAAGATAAACCCTGCGTCTCCGCGACAGCATACGGACTCGTCGAGAAGACACAGCGCTCCGAATCCAGGCTTGCCGACCGGTTATGTCGGTACGACAGCCCAAAACTCGCCAGGCTTTCTCGCACAACTGCCAAACACGGCGACCAAGTTCCTACCGATGCTCGATCCTTTGTActattcggctttttacaaCGGCCTTTTCCCCTCGCCGGTACCACCGACGTCGCAGCCCTACATACCGCCCGAGTTCAGCGCTTATTACAAGGAATTGCTCGCATCGTCGCAACCGAGACTGGCAATGGCGGGACAGCATCAACCGGCCGTTCCAACCTCCAAGTAG
Protein Sequence
MADDVEDEVLTISEKVVVRVHDLVTWLSPSVEWSWGREVSLPTSPKSSSSEGSPQKLEGNYPQVLTDPGIDFTDVDKQQKEFETNLSGPKRQDEDNTYTTQPRVVVLSYPRYCRYRALLRRLEGAEPSWFSSSVAAALGGFTALPGTKVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSASPGESSNESEASVASTSRGAISNLSLAPALRPPSGVRRSERNTCGEEKRFLTDVHSFMRSRGTPVGKMPLLGYRQIDLFLFYTKVQKLGGYDSVSGGRLWKSIYDDIGGNVGSTSAATITRRHYERLLLPYERHQRGEETKVRPAYGRRLKCRSLSGDSIELKPEIGRISTSETPPPPEAPTVASPVPPLQSILSSTPFLPGDKPKTEGGKTSSLRSVRVKPERLKSLNTIIANSTPVVNQNSSQLPSPSPPPSSNASSSSTSTSNTPSSTPSTTPTSAAGVGAVTIGQSVLERQLNSPLISQQVPPASTSPPPSLPVIAVTTHSTAIVTLTPPPEKDMKEMKLDPKPTSLLAQGKENIPIFGEKPIFAEKSLPPPKSPEVIDLEMENDTSRDKIVIPSFKKRKLEILREGGLEVTAVDLDARPSVIQATIVPVTTVSGHATKIDETNDQSFSAPTTPNSVPKLISVTVTPDIGHMLPSHQEQSIVNGNSHVHPQTRPSAVKSSSNRSNLQPPTPQTNKSSAHNNNNNNNSAFANNTGNSRVINVGSPSNANLLQLYANATNAAQPNQSSPPPVNHRFVPPSPTNDRQATAPPKVTQSRSIFAHNEKVVYGNPKDILIPHNYHHQVSSQHQQSPHTASNTNTTTNASAILDLTQKQVDRAFARPNLEIVRVPVVPRTNPLNLDMKNTIAKEKLQEANSRKAAVFPGYAGMLDSRTMASNNLEITLVSPKHRGHPPTPPQVHQRPTSPPIARLQNNSNNNVNNATCNSPNNTVTSQQRRHQNGKYPSRLESVPQYASRKPSHQPIIPNIPNLHNLNNTSYTSLKTSAIHRQQQMQQQQQQPPQHQPQVQQRQQKQEQEQPDKQQTLADNRKTTGESVSQEQLNNHQRRISESDKTSIVGQQQHQHLHKINPASPRQHTDSSRRHSAPNPGLPTGYVGTTAQNSPGFLAQLPNTATKFLPMLDPLYYSAFYNGLFPSPVPPTSQPYIPPEFSAYYKELLASSQPRLAMAGQHQPAVPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

80% Identity
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