Basic Information

Transcription Factor Domain

TF Family: zf-C2HC
Domain: zf-C2HC domain
PFAM: PF01530
TF Group: Zinc-Coordinating Group
Description: This is a DNA binding zinc finger domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.029 2.9e+02 2.8 0.4 22 29 16 23 15 23 0.88

2 5 3.1e-18 3e-14 53.8 6.9 1 29 36 64 36 64 0.98

3 5 1.5e-17 1.5e-13 51.7 5.2 1 29 81 109 81 109 0.97

4 5 4.2e-19 4.2e-15 56.6 5.7 1 29 142 170 142 170 0.97

5 5 4 4e+04 -4.5 2.4 6 11 218 223 217 223 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.029	2.9e+02	2.8	0.4	22	29	16	23	15	23	0.88
2	5	3.1e-18	3e-14	53.8	6.9	1	29	36	64	36	64	0.98
3	5	1.5e-17	1.5e-13	51.7	5.2	1	29	81	109	81	109	0.97
4	5	4.2e-19	4.2e-15	56.6	5.7	1	29	142	170	142	170	0.97
5	5	4	4e+04	-4.5	2.4	6	11	218	223	217	223	0.86

Coding Sequence: ATGAGACGCCACGACAATTGGCAATTGGCGAGTTTCATTGGGGTCTGTCTCTCCGGATGTCCGAGAGCGGATCGTTCACAGATTCAAGCACACTCCCAAGAGCTGAAGTGTCCAACGCCGAACTGCGATGGCTCGGGCCACGTCACCGGAAACTACAGTTCCCACAGAAGTCTCTCGGGCTGCCCGCGCGCCAATAAACCAAAGAGCAAACCGCGGGACGGCCAGGACTCCGAACCGCTGAGATGTCCAATCCCCGGTTGCGACGGCTCCGGGCACGCAACTGGAAAATTCTTGTCTCATCGCAGCGCATCGGGTTGTCCACTGGCGAATCGGAACAAGGCGCGAGTATTGGAGTCCGGGGGTACGATCGAGCAGCACAAGGCCGCGGTAGCAGCGGCGACCGCCATGAAATTCGAAGGTGTGAATTGTCCCACCCCGGGTTGCGACGGTATAGGCCACGTGAACGGTTCCTTCTCGACGCACAGATCAGCGTCGGGATGTCCAATAGCGGGGCATTCCATCAAAAAGCCCAAATACGATGACATAAGCATGTACAGCAAAGGAATCACCGGGGTGGATGCCGGTGGTGGTCCGGCACAGGGAGGTCCGTTGGGTGCGGGTCAGGGGAGTACCAGCGGTAGCGGACCTGCTGGTTGTGGCGGTCAGGGCGAGGATCTCTACTCATTGGAGGCAGAGATCACCGAGTTACAGAGGGAGAACGCCCGTGTCGAGTCCCAGGTACTGCGTCTGCGCTCCGATATCGCCTCTATGGAAAATCAACTGAAGCACGGCGACAAGGAGACGAACGTGATCGCCCAGCGCAACAGCAATCTCAAGGACTACTATCACTCGTTGCGGGAGAACGTGATAACGATATTGGAACACGTGCGCATGCCGAACGCCCCGGGCAGCGCTCACCAGGAGAAAATGAGCCACGAAAACTTCGACAGTTATCTGACGAAGCTCCAGACCTTGTACACACCCGACGGCTACTGTGCCGACGAGAGCAACAGGCCTATCTACGAGTCCGTCAAAACGGCCCTTCAGGACTTTACCGTACTGCCGACACCCATCTGA
Protein Sequence: MRRHDNWQLASFIGVCLSGCPRADRSQIQAHSQELKCPTPNCDGSGHVTGNYSSHRSLSGCPRANKPKSKPRDGQDSEPLRCPIPGCDGSGHATGKFLSHRSASGCPLANRNKARVLESGGTIEQHKAAVAAATAMKFEGVNCPTPGCDGIGHVNGSFSTHRSASGCPIAGHSIKKPKYDDISMYSKGITGVDAGGGPAQGGPLGAGQGSTSGSGPAGCGGQGEDLYSLEAEITELQRENARVESQVLRLRSDIASMENQLKHGDKETNVIAQRNSNLKDYYHSLRENVITILEHVRMPNAPGSAHQEKMSHENFDSYLTKLQTLYTPDGYCADESNRPIYESVKTALQDFTVLPTPI

Sequence clustering based on sequence similarity using MMseqs2