Basic Information

Insect: Ophion obscuratus
Gene Symbol: ci
Assembly: GCA_964007375.1
Location: OZ023312.1:37706709-37765198[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00027 0.043 15.4 0.3 3 23 362 385 360 385 0.94

2 5 0.092 15 7.4 0.1 2 23 394 420 393 420 0.82

3 5 0.00018 0.029 15.9 3.0 1 23 426 450 426 450 0.98

4 5 0.00028 0.044 15.3 0.4 1 23 456 481 456 481 0.97

5 5 6.5e-06 0.001 20.5 0.3 1 23 487 512 487 512 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00027	0.043	15.4	0.3	3	23	362	385	360	385	0.94
2	5	0.092	15	7.4	0.1	2	23	394	420	393	420	0.82
3	5	0.00018	0.029	15.9	3.0	1	23	426	450	426	450	0.98
4	5	0.00028	0.044	15.3	0.4	1	23	456	481	456	481	0.97
5	5	6.5e-06	0.001	20.5	0.3	1	23	487	512	487	512	0.97

Sequence Information

Coding Sequence: ATGGAGTGGGGAAAAAAAGGAACGGCCGTTGAGGAGATGCCAGTCGTTGTCTTTGCTCAGCAAACTTACAGGAAAAGGGGTTCAACGGCCATCGGTAGTACAGCGGGTACGAACGCAGTCGGTTGTGGAGCCGGAAGTGGAGGCGAGCCAGGTCCCGGTGCCCCAGGCAGCGGTGGCAACGGGACTTCCGGCGGTGATTTCTTCCGCAGAAGTCATCCCCTGTCGGAACATACGCCGCTCCATCCAGCCTATCGGCTCAACTACATGGACCACCTTTATCACCAGCTCCAGGCCTCAACGCACAGTCCCAACGCTTCATTACACGGACTGGGTGGCCTGGGGCCGGAGTACCTTCTGCACGCCGCTGGTCCAGCGAGTACTCTCGCCTCCTCGGAGTTTCCCTTCTCGATCGATGCGTCTTCGAGGCTAGGAAGTCCAAGAGCATCGGCGATAAGGGCGAGCAGAAAACGAGCACTTAGCAGTTCACCGTACTCCGATCGCTTCGACATCGACAGTATGATACGTTTCAGCCCCAACAGCCTTGCCTCCATCGTAAACGGATCACGGAGTAGCAGCGCCAGCGGAAGTTATGGCCACCTCTCAGCAGCGATGAGTCCGGCGTTGGGGATGCATCCAGGAATGGCGCCACATTTGCAACAATTGCAAGCTCATCTGTTGAGGAGCGCAGCGGCGGCTGCATTGTTGCCCCACGCTCATCCTCTCCAGCCGCCACCGCCACCGCCACATCCACACAGTCATCCACATTCTCACGGTCTGGCGCCTCACACGCAATTGTTCTCCGTGCCACCGCACTCGGCCGCCTCCATAACCCTCGGACCCCACGGGGGTAGTTTACCTCCCAAGACCGAGGGATCCGAGTCATGTAGAAAGGCGTCGGAAGCGTCAAATCGATCGATAGCGGCGGAAGCTGACACGTCCTCGAGGAGACATTCGACAAAAGTAAAGAGGGAACCAGCCACTACGACGACGGTCACCCCGGCGACCGTACCGTTGACTCATCCACAAGGATTGAGCCCCAGCGAGGATCTTCGCGACGAGCCGGGCGACTTTATCGAGACGAATTGCCACTGGAGAGATTGCGGCCTTGAATTTCCCACTCAGGATGATCTGGTAAAGCACATCAACAACGAGCACAtacacgcaaataaaaaaagtttcgttTGCGGCTGGGAAGAATGTTCGCGGGAGGAAAAACCCTTCAAAGCTCAATATATGCTGGTAGTTCATATGAGGCGGCATACCGGCGAAAAGCCTCACAAATGCACCttCGAGGgatgtttcaaagcgtactccAGACTTGAGAATCTCAAAACGCACCTTAGATCACATACAGGCGAGAAACCGTACACCTGCGAATATCCAGGATGCAGCAAGGCCTTCAGCAATGCGAGCGATCGGGCAAAACATCAGAACAGAACTCATTCGAACGAGAAACCGTACGTCTGCAAAGCACCGGGTTGCACGAAGAGGTACACGGATCCGTCGTCGTTGAGGAAACACGTGAAGACGGTCCACGGAGCAGAATTTTACGCGAACAAGAAGCACAAGGGTGGCGGCGACGGCGGTGGAAGCGACGAGGCAGGCGCGGGTGGTCACAGCCCCAGTAGAAGCGAGGATCTTCATCCAAAGACGCCGAGTCTGTCGAGTCCGAGCGTCAAATCGGAGAGCGAGGCGAACAGTCCACCGGGTATGATGCAACAGCAGGGAAGCCCGCTCGTCGGTGGATGTAACGACGATGTGACGGGGGTCGGTGGTGTGGCCGGTGATGCTGTTGTACTTGCCGAGGAACAATGGAACGAGGAAGCCGATAATCTTTATATCGCCGATCTTCCCGTCGCTCTTCGTGCCATGGTCGGAGGAATGGAGACGCAGCAAGCCCCGCCACCCTCGAGAAATCGTCTGAAGGGTAGACTGAACGCGAAAGCAATGCCGCCGCTTTCCTCGGGTGTGGTTGGACTCCGCGGTACTCGTATAACCGGTCCACAGGGTAACATCGGGGATCTGAATCGACGTATAACCGATCTGAAAATGGAGGGTGGCACGACGAGACAGACCAGTCTGTCGGATCTCCAGCTGAGGCTACAGCCACTGAGCGAACCGAGGAGGGACAGCAACAGTACGGTCAGCACGTATTACGGGAGCATGAGATCGACTGACTTTGGCAGTCGAAGAAGCAGCCAAGCCAGCGGTGTCAGCGCGGTTAGAATGGGACCGGCTGGACCTGGAAGTTTTTACGATCCCATAAGTCCAGGCACGTCGAGACGAAGCAGTCAAATGAGCAACACTTCCAGCAGGATTAATCCACCTGGACATCTTCAGGGACCTTATTCCACGAGTAATCTGGTGGTGCAGACGCAGAATATGTCGCTACAGGGAGTCCAAGCTGTACCTGGAGAGTGGGCACCGAGCGGTCATTGCCTCGGACAGCCTTCGAGTGACAGGCGAATGTCCGAACCGGCGAGAGGGCACCAGAGTCAACGAACATCACCGCCAGTACCACCGAGACCAAGATCCGCACAACTCCCCGAGCTTCATCCCAATCAGGAAGTCTTGTTGGACGACATGGGCGAGGGTGAGATGGTGGAGAACAAACTCGTCATTCCCGATGAAATGATGCAGTATCTCAATCAGGTACAAGCCGGTGGAAATCATCAGATGAGTTATCGGGGAAGCCCTCTTCCGATATGCCAATCACCGATATGCACGAATCCGTTGCACTATCAGCGTCAGCAGCCACCCCCGTGTAACTACAATAATCAACAGCTGAACAATCAATCCGCCTGCTATCCccaacaacagcagcaacagcaacaacaacagcagcaacaaccGACGAATCAACAAAATTGCGCAAACTATCAGAGCAATTCGCCGGCGTACTCGCAGTGTCCGAGTTCGCGTATGAGCCAGGCATCGGGTTACTGTCCAACGCAGAATTACGGCCAGTCGCCGAATTGCGTAGCGCAAATGCAGCCGAGTCCGGTGGGTCAAGTGATGTCACCGGGCTCGCACTACGCTCCGAGTCACGCGAGTGATCAGCCAATGACGTCACCAGCAGCCGGTGCCTTACCCCCGCAACACGGATCACCTCAGAACATTCAACAGAATACGGCGCAAATGAGCCGTAATTGCATCCAACAAAATCATCACCAAACGGTGCCTTATTATCCGCTGTACGGTTGCCAGGCTCAGGTGAACTCGAATTGCGGGCAGTTGCACGGAAATTCGACGAATTGCGGCCCAACTGCACACCCGTCCACGTTGCAGTGCCCTCAAATGCGAAATTGTCCGCAAATCGGCTCGCACTGTGGACAAACGGTTGGTAATCATTCGCCGAGCCGTATTCCCGCTCAGCATCCCGTCTCGCAGTGCGGACAGCCGAATTCTTGTTCTCAGAATGCGAGCAGGAACGTGAACACGAACGAGGGAAATCCTCAGGACATGGAAGTGGTCGGTAGAGTTACCATTGGCACCTGTTCGGCCGTAGGCTCTCACTGTCCTCAGACAGGTGGCAAAGTGCCCTCCGGCAATAATCAAGCGAATCAACAGGCTCCCCTTCAGTCACCGCTCGGACAATGCTCGCAGAATCCTGCCAACTGTATTCATCCCGGTGTCACGTCGCCGAGGCATCCCCACAGCTCTACGAACAGTACCACCAAAGGAACGACGAGCCTGTGCAACGTGCAGAACAATTGTCGAATACAGAGCTGCGGTCATACCGGCTGTCAGATATCGGCCAATCAGATAAATCAATACGGCTGCAATTGCCAGTGGAATTACAACAACGAGCAGTGCTACAACGGCCACGCAACCGGCGAGATACAGTGCCGCGACATAAGCCAGTCGCAGCAAGGCTCACCGGCAAAGCCACCGCAGGGCATGAGACAAGACTCTTACAGGCGTACACTCGAGTACGTTCAGCAGTGCAGAAATTGGTCGGGCAATAACGCACCGACGCACGAAACGAACGTCTCGAGCTCGACTCATCCGCTCTCGTTGCCCCAACCACTTCCGGCGAGCAGCAATATGGTCGTTAACGACATGACCTCGTCACTCAGCAGCCTCCTCGAGGAAAACAGATATCTTCAGATGATTCAGTGA
Protein Sequence: MEWGKKGTAVEEMPVVVFAQQTYRKRGSTAIGSTAGTNAVGCGAGSGGEPGPGAPGSGGNGTSGGDFFRRSHPLSEHTPLHPAYRLNYMDHLYHQLQASTHSPNASLHGLGGLGPEYLLHAAGPASTLASSEFPFSIDASSRLGSPRASAIRASRKRALSSSPYSDRFDIDSMIRFSPNSLASIVNGSRSSSASGSYGHLSAAMSPALGMHPGMAPHLQQLQAHLLRSAAAAALLPHAHPLQPPPPPPHPHSHPHSHGLAPHTQLFSVPPHSAASITLGPHGGSLPPKTEGSESCRKASEASNRSIAAEADTSSRRHSTKVKREPATTTTVTPATVPLTHPQGLSPSEDLRDEPGDFIETNCHWRDCGLEFPTQDDLVKHINNEHIHANKKSFVCGWEECSREEKPFKAQYMLVVHMRRHTGEKPHKCTFEGCFKAYSRLENLKTHLRSHTGEKPYTCEYPGCSKAFSNASDRAKHQNRTHSNEKPYVCKAPGCTKRYTDPSSLRKHVKTVHGAEFYANKKHKGGGDGGGSDEAGAGGHSPSRSEDLHPKTPSLSSPSVKSESEANSPPGMMQQQGSPLVGGCNDDVTGVGGVAGDAVVLAEEQWNEEADNLYIADLPVALRAMVGGMETQQAPPPSRNRLKGRLNAKAMPPLSSGVVGLRGTRITGPQGNIGDLNRRITDLKMEGGTTRQTSLSDLQLRLQPLSEPRRDSNSTVSTYYGSMRSTDFGSRRSSQASGVSAVRMGPAGPGSFYDPISPGTSRRSSQMSNTSSRINPPGHLQGPYSTSNLVVQTQNMSLQGVQAVPGEWAPSGHCLGQPSSDRRMSEPARGHQSQRTSPPVPPRPRSAQLPELHPNQEVLLDDMGEGEMVENKLVIPDEMMQYLNQVQAGGNHQMSYRGSPLPICQSPICTNPLHYQRQQPPPCNYNNQQLNNQSACYPQQQQQQQQQQQQQPTNQQNCANYQSNSPAYSQCPSSRMSQASGYCPTQNYGQSPNCVAQMQPSPVGQVMSPGSHYAPSHASDQPMTSPAAGALPPQHGSPQNIQQNTAQMSRNCIQQNHHQTVPYYPLYGCQAQVNSNCGQLHGNSTNCGPTAHPSTLQCPQMRNCPQIGSHCGQTVGNHSPSRIPAQHPVSQCGQPNSCSQNASRNVNTNEGNPQDMEVVGRVTIGTCSAVGSHCPQTGGKVPSGNNQANQQAPLQSPLGQCSQNPANCIHPGVTSPRHPHSSTNSTTKGTTSLCNVQNNCRIQSCGHTGCQISANQINQYGCNCQWNYNNEQCYNGHATGEIQCRDISQSQQGSPAKPPQGMRQDSYRRTLEYVQQCRNWSGNNAPTHETNVSSSTHPLSLPQPLPASSNMVVNDMTSSLSSLLEENRYLQMIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00629387;
90% Identity: iTF_01101636; iTF_01102347;
80% Identity: -