Oobs034241.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ophion obscuratus
Gene Symbol
RREB1
Assembly
GCA_964007375.1
Location
OZ023323.1:13917227-13930695[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.00089 0.14 13.7 0.0 1 23 88 110 88 110 0.98
2 16 0.0002 0.033 15.8 0.3 1 23 124 146 124 146 0.98
3 16 2.2e-06 0.00035 22.0 4.5 1 23 152 175 152 176 0.97
4 16 0.047 7.5 8.3 0.5 1 23 284 307 284 308 0.93
5 16 4.4 7.1e+02 2.1 2.8 2 23 314 336 314 336 0.91
6 16 2.1 3.3e+02 3.1 0.5 1 19 394 412 394 414 0.89
7 16 0.028 4.5 9.0 0.1 1 23 534 556 534 556 0.97
8 16 6.9e-05 0.011 17.2 0.3 1 23 565 587 565 587 0.98
9 16 0.0061 0.97 11.1 3.1 1 23 593 616 593 616 0.97
10 16 0.00054 0.087 14.4 3.0 1 23 1056 1079 1056 1079 0.97
11 16 0.00078 0.13 13.9 0.1 3 23 1393 1413 1391 1413 0.97
12 16 1.1 1.7e+02 4.0 6.5 1 23 1419 1442 1419 1442 0.97
13 16 0.022 3.5 9.4 1.8 1 23 1504 1528 1504 1528 0.95
14 16 0.64 1e+02 4.7 3.1 1 23 1669 1692 1669 1692 0.96
15 16 0.013 2.1 10.0 0.4 2 23 1744 1765 1743 1765 0.94
16 16 1.6 2.5e+02 3.5 8.2 1 23 1771 1793 1771 1793 0.98

Sequence Information

Coding Sequence
ATGTTGCGACGCGCTACGATTCGACGAGTATGGGATAAGTCGAACGCGAGGCTCGTCGAATATCTTCGAAGCGGACACAGCATCGAAGAGTACACGTACCCATTGCCGATCCTGAAGACTACGACgacagcaacagcaacagcagccGGGACGGCGGTAACCGAGCAACCCGAGATCCGACCTAACCATCGACACAGCAGCGAAACAGCCACAGATGCAGCATCCTCCCCATTGACATCGGACCACCAGGACACCACAGCGTATCCCTGTCCGGCCTGTCCAATAGTCGTGACAACGTCGCGCGATCTGACGAATCACCTACGAGGCCACAATTCCCCCCGCAGTACCGATTACAGCGGCGAGGACGATTATTCCTGTGGCGTTTGTCACAAAGTGTTGAGCTCCGCGAGTTCCCTGGACCGTCACGTTCTCGTTCACTCGGGCGAGCGTCCCTTCAAGTGCAAACACTGCGACATGGCGTTCACGACGAACGGCAACATGAATCGTCATCTGAGAACGGCCCATCACGGGGCGTCGCCTCGCGACAACAGCGCCTACACGGATTCCGACGGTAGCAGCGATTCCGAAAAGTCCGGCACAAAGAGACGTCGCGACGCGACGATCGAGCAAGAGTACAACAACAACGAGATCGGCAAGAGCGCACCAACCGATCATCATCTCTTCGGCAATCACGAGTCCTCCTCGCCCACGAGATTCATGGCGAAGCGCAAACGTTCCGAGATCACCGACATAACGGAAAATCCCACGAGAAAGCACAAAATAATGTTGGGCAACTCGCGCACCGAGTACCAAAATGGCGACGCGAGAAACGACTCGCGCACAGTCGTGCACAATTGTCCGTTATGCGGAAGATTGGACTTTGCAACGAGCGCCCTCCTCGAGGCCCATCTCGAGCGTCATCATCCGGAATTCCCGGCAAAGTGCGATCCCTGCAATCTCTCGTTCAAAAATCATCGCGTTCTCAATCTTCACAAATACATGAAGCACATAGACGGCGAGAACAGCTCGGTCGGTAACAACGGCCGTAACTTGCGCAACTCGGTCGTTGgcttcgacgatttgacgtttgTGGATTTCTCGTCGGATAAGTTTCCAGCGATAGCGCGTGCCGTATGCGAGCAATCGCTTCATCGTCCCGCGTCCGGTGAGATCGCGAGATTCCAGTGTGACAAGTGTCTCCGTGCGTTTCCCTGTCGTTCGGCCCTTGACGCCCACGAGACCGACTGCGGCACGAGCATTCGTACGTCGGCGTGTTGCCTCGACGAGCGTTCCTCCCGACGCGACGACTTCTTCGCGGGTCTCGATCTTCAGAACCGAGCTGCCCTTACCGAGGCCAAAGACGGCAAGGATCTCGCTGACATACAGAGCATAATATCCCTCACTTCCGGCCCGATATTGCAGAGTTTCCCGCGCTCGGACGCGAGCACACCGGAGCATCACAGAATCAAGGCTAACGCGAGTACGGCCGGTTGTTCGTCGGGCTCCTCGAGCACGCCATCGTCCTCCGATTATCATCAGGAGGAAGAGGCCCAAGACGCCTTCGCCGCCGAATTCCGTCGTATGAAGCTCAAAGGCGAGTTCCCGTGTCGCTTGTGCGAGGCCGTTTTTCCAAATCTTCGGGCCCTCAAGGGTCACAACCGTTCGCACATGGGTGTCGGCCCCGGTATGCCCTATCCTTGCAACATGTGTCCCTACACGAGCAACGACAAGGGCACCCTCGTCCGCCATTTGCGATCTCACAATGGCGACCGTCCCTTCGAGTGCTCGCTCTGCAACTTCGCCTTCACGACCAAAGCCAATTGCGAGAGACACGTGAGAAATCGCCACGGCAAAGTATCCCGTGACGAGATCAAGAGCGTCATCATATATCATCCGAGCGAAGACAGCACCAACGACTCGGGCTCCCTCGACCGTACGGATACGCGTCGCGAGGACGCCCGCAAGTCTCTTGTTTATCCAACGAGCGTGGCCGTCGGTGACAAAGACGACAGCTCACAGCGTCGCAAAGACTTCTATCTGGGGCTTCAATTTGGCAACAAACAGAGCACACCCAGCAACCTCCTTTCCGACGAGCCATCCAACTCCCTGCGATCTCTTCGTTACGACAAAACTGATCCTTTCCCGGGTACACCGACACGCGGCCTTTACACCCGTGACACGAGCCACGGAGCTTtggacgacgaggacgacgaggacgatTACGATGATTACGATTACGAGGAGAACGAGAACGATTACGCAACGATCGGCAAGTCCGAAAACGATGGCAAAATCGGCTACGGCTCGAGATCCTCGGAGGAGGACGGTGCTCTAGTCAACGATACCAAAATGGCGTTACACCAAAGAGTACAAGCTAGTCCGATAGACCTGAAGAAGCAGAGCACCGGGGCCGTGACAGCTTCGACCGGAAGTCCAAACGGCGACGACGCGGTCGTCGAAGCTTCGACCTTCGCGAGCGCCGAAGACGCGCCCCTCGATCTGTCCATGGACGTTCTCGATCTTAGCAAAAAGTCAAACGGCAACAGCGCCAATCGCGACGTGTCCTCCTCGTCGCCCGTCGCCAACGCCATTCCCACAAACGAGACCGAATACGGTCGCAATCAGAAGGACTTTTACGACGCTACCAATCAATTTTTGCTCACTCAGGCGTTGCTGAAGGCCGGACAAGCCGGTAATCCCGCCACCTCGCTCGAGGCACTTTACGCCAACGCTCACATGATCTACAGGAACTTCGGTGGATTCTCGGCAGCTGGCGTTGGCACTGGTATACTACCGCCCTATCTATTCAATCCCCATATGTTCGGACAAGAGTTCGCGATCAAGGACCGCCTGCAGAAGGAACTGCTGCGCGGTTTGCAGCTCACGAGCGGCGGCAATCTCGTCGAGCCGTCCGTTGGCAATACCGCCTTCACCGGTGCCTATCCACCGGCCCGAGAAGCGACGATCTCGCGGGCCGAACAGCCCAACAACGACTACGCCAAACTCGCCAGCTCCAAGCTAACGACGAAAATCGTCACCGGCACGTCCTCGATCAGAGAGCCCAAAGTCGCCAGTCCGCAATCCTCGAACTCCGTGAAAATGGTCATCAAGAACGGCGTTCTTATGCCCAAACAGAAGCAACGAAGATACCGAACCGAGAGACCATTCACGTGCGAGCATTGCTCCGCAAGGTTCACACTACGCAGCAACATGGAGAGGCACATCAAGCAACAACATCCGCAACACTGGAGCCAAAGACCGCGCGGTGGTCACTCCACCAGAGGACGCCCACCGGCTAATCCAGCCAGTCTCGTCGTGCCAATCGGCAACAATCATCACGTCAATCATTCAATCTCGCAACCGTGCAATCCGACGTTGCCAAAAATTGCCACTTCCGGCGCTTCCTCGAGCTACGAGAAACACTCGATTTCCGATCAGGTGAAATATGCGATTTTGGCGCAACAGCTGAAAGGCAGCAAGATCGAGGAAAACGACACCGAGGAGgagctcatcatcgacgagagcGCCGCCCATGAGAGCAAAGAGGCGGACGGCGAGGCACTCGCGCGCACCACTACCAGTCTCCTCAGAGGGAAACTCGAGGGAACGAGCACGTCATACAGGGAGACCAGATCGGACCAGCAAAGAAACAAAGCCCCGGAAGTGCCGAGGCGAGAATCTCCCAGGCGCGAGGAAGCCACGCAGCGAACGGAACGGACAACCAAGGAACCcctggtggaagattgccgcaAAGTCGTCGTCAAGACGGAGCCCGAAGAGATGGAGGATCGTGAGGAAAAAGCGGTCAGAGACGCTGACCGGCACGAGGCTCGTGAACCCAGTCAATCGGGCCTTTCGGAAACGACAAAAGTCGAGCAATCGAGCTCGCGCGATTGCCCAACCCTCGAGAGAAGCGAAGACCTCGCGAGTGTTTCCGAACTCTTGGACAACGCGTCCCAGCAGTATCAACAATTTCAACCGCAGTACATGAGCGACGAGGAAGGCCTCGTTGCGTCGACCAGCGACTGCAACAATTCCGGCAGTGACGAAAAATCGGATTCCGTCAATTCGGCAAATTCCACGAACTCCCAAACGTCCTCGAagcgaaagaagaagaaaaagaagaaaatgaagaagaagaaaTCGGCTTACTCGATGGCGCCTAATCGCGTGATATGCCCTTACTGCGAGAGGCCGTTTCCCTGGACTTCGTCACTCAGAcgacacatactcacgcacacGGGACAGAAGCCCTATCAGTGTATGCACTGCTCGTTGCTCTTCACCACAAAGTCCAATTGCGATCGTCACTTGCTGAGGAAACACAAGAACAACGCCAACAAGATACGCCGCATGAGGAACTCATCCTCACCGGAGACACTCGAACAGCCCTCCAATAACAACGACaccagcagcaacaacaacaacatcaGCAGcagtaacaacaacaacaacaacaacaacagctcAAGCAGCGCATTCGCAATGAGAAACGTGCCCGAGAGACCGTACAAGTGTAACCTCTGCCCGAGCTCGACCTTCTCGACTTTGGGCAACCTCAAGAAGCACAAATCCTCGAAACACTCGAGGAATCCTGGTGTCAAGTCACGAGCCGAGTCACCGGTCGAGAGCGAGCCGCGCAACAGCCCGATCACCACGTCGAACAAGCAAAACGACAACAGCGGCTACGAGAGCCAATCGTCCGGTGTCTCGGAGAACACGGATCACATGGATACCCTGGAGAACCTGGAGAACCCTACCACGAACGTCGAGGGGGAGGCCGCCGATGCTGAGATCGTCGAGAACCATCAAACATCCACGGAGCCAACAATGGAAAACCGAACACGCGACCATTTGGAAAGTACGGAATGCAACGAACCACCGGACAACTCTACCGACAACACGACGCCGAAGAATCACGAGACGTGTCCAACGATGACGACCGAGGCCGCCAAGTCGCGAAGATTGTCACCGAGGTCGTCACCCGGGCCTAACGATGCACCGTTCAAGTGTCATCTTTGCGACAGCGGCTTCTCCGAGCGACAGGACTGCCTGGAACACATTAGGATCAACCACACGAGGTCGTACGAGGTTCTCGTCGCCAAGGGCGCTCTCGACATGGATATCGAGACCCCGGAGGAACAACAGACCCCAAACCCATCCGCCGTGCACACGAGCGACGGCGAAGAGAAACGCGGCAGATTTCCGGACTACAGCAACAGAAAGGTTGTCTGCGCATTCTGCATGCGTCGTTTTTGGTCAGCGGAGGATCTTCGACGGCACATGAGGACCCACACGGGGGAGCGGCCGTTCTCTTGCGACATATGCTGTCGGCGTTTCACCCTCAAGCACAGCATGCTCCGTCATCGGAAGAAGCACGAGTCCGTTGATTCGATGATGTACGTGGGCACGAGCGGTGACGAGGAATCGGCGCCGTCCCAGCCGCCGACGATAACACCGCGCAGCCAGCAACAACATCAGCACAATCCAGGCCTCGTCGGCAATGCCAGTTGCGACTCGGGGCTCCAGGAAAGAATGTCAATTGGCAGTGCGGTGACCGTGGCGACCGGCGACGCCGCGCCCAGTGGCCTCGGGCGCTTCAATCCTTACGAAAAATTGGCCACCTTCACCGGCAAAATGACAAACGCCCAGCAGAACTTCAACATCGGCGAGGGCACCGCGGACACGGAAAACGATCTCATCTCGAATCTTCTCGGCATTCGGGACAAAAGCATCATCGACAAAGTCTTGCAGGCGTCGGCTGACGACGCCGCCAAGCTACTCGGTGTCAACAGACATCACGATTGA
Protein Sequence
MLRRATIRRVWDKSNARLVEYLRSGHSIEEYTYPLPILKTTTTATATAAGTAVTEQPEIRPNHRHSSETATDAASSPLTSDHQDTTAYPCPACPIVVTTSRDLTNHLRGHNSPRSTDYSGEDDYSCGVCHKVLSSASSLDRHVLVHSGERPFKCKHCDMAFTTNGNMNRHLRTAHHGASPRDNSAYTDSDGSSDSEKSGTKRRRDATIEQEYNNNEIGKSAPTDHHLFGNHESSSPTRFMAKRKRSEITDITENPTRKHKIMLGNSRTEYQNGDARNDSRTVVHNCPLCGRLDFATSALLEAHLERHHPEFPAKCDPCNLSFKNHRVLNLHKYMKHIDGENSSVGNNGRNLRNSVVGFDDLTFVDFSSDKFPAIARAVCEQSLHRPASGEIARFQCDKCLRAFPCRSALDAHETDCGTSIRTSACCLDERSSRRDDFFAGLDLQNRAALTEAKDGKDLADIQSIISLTSGPILQSFPRSDASTPEHHRIKANASTAGCSSGSSSTPSSSDYHQEEEAQDAFAAEFRRMKLKGEFPCRLCEAVFPNLRALKGHNRSHMGVGPGMPYPCNMCPYTSNDKGTLVRHLRSHNGDRPFECSLCNFAFTTKANCERHVRNRHGKVSRDEIKSVIIYHPSEDSTNDSGSLDRTDTRREDARKSLVYPTSVAVGDKDDSSQRRKDFYLGLQFGNKQSTPSNLLSDEPSNSLRSLRYDKTDPFPGTPTRGLYTRDTSHGALDDEDDEDDYDDYDYEENENDYATIGKSENDGKIGYGSRSSEEDGALVNDTKMALHQRVQASPIDLKKQSTGAVTASTGSPNGDDAVVEASTFASAEDAPLDLSMDVLDLSKKSNGNSANRDVSSSSPVANAIPTNETEYGRNQKDFYDATNQFLLTQALLKAGQAGNPATSLEALYANAHMIYRNFGGFSAAGVGTGILPPYLFNPHMFGQEFAIKDRLQKELLRGLQLTSGGNLVEPSVGNTAFTGAYPPAREATISRAEQPNNDYAKLASSKLTTKIVTGTSSIREPKVASPQSSNSVKMVIKNGVLMPKQKQRRYRTERPFTCEHCSARFTLRSNMERHIKQQHPQHWSQRPRGGHSTRGRPPANPASLVVPIGNNHHVNHSISQPCNPTLPKIATSGASSSYEKHSISDQVKYAILAQQLKGSKIEENDTEEELIIDESAAHESKEADGEALARTTTSLLRGKLEGTSTSYRETRSDQQRNKAPEVPRRESPRREEATQRTERTTKEPLVEDCRKVVVKTEPEEMEDREEKAVRDADRHEAREPSQSGLSETTKVEQSSSRDCPTLERSEDLASVSELLDNASQQYQQFQPQYMSDEEGLVASTSDCNNSGSDEKSDSVNSANSTNSQTSSKRKKKKKKKMKKKKSAYSMAPNRVICPYCERPFPWTSSLRRHILTHTGQKPYQCMHCSLLFTTKSNCDRHLLRKHKNNANKIRRMRNSSSPETLEQPSNNNDTSSNNNNISSSNNNNNNNNSSSSAFAMRNVPERPYKCNLCPSSTFSTLGNLKKHKSSKHSRNPGVKSRAESPVESEPRNSPITTSNKQNDNSGYESQSSGVSENTDHMDTLENLENPTTNVEGEAADAEIVENHQTSTEPTMENRTRDHLESTECNEPPDNSTDNTTPKNHETCPTMTTEAAKSRRLSPRSSPGPNDAPFKCHLCDSGFSERQDCLEHIRINHTRSYEVLVAKGALDMDIETPEEQQTPNPSAVHTSDGEEKRGRFPDYSNRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICCRRFTLKHSMLRHRKKHESVDSMMYVGTSGDEESAPSQPPTITPRSQQQHQHNPGLVGNASCDSGLQERMSIGSAVTVATGDAAPSGLGRFNPYEKLATFTGKMTNAQQNFNIGEGTADTENDLISNLLGIRDKSIIDKVLQASADDAAKLLGVNRHHD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01100840;
90% Identity
-
80% Identity
-