Basic Information

Insect: Ophion obscuratus
Gene Symbol: -
Assembly: GCA_964007375.1
Location: OZ023312.1:14462412-14466127[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 8.7 1.4e+03 1.2 0.2 2 16 60 74 59 76 0.79

2 18 0.0047 0.74 11.5 2.9 1 23 339 361 339 361 0.98

3 18 0.0042 0.67 11.6 0.8 1 23 410 432 410 432 0.98

4 18 0.086 14 7.5 0.4 1 20 484 503 484 505 0.93

5 18 0.63 1e+02 4.8 0.4 1 21 517 537 517 540 0.74

6 18 7.6e-07 0.00012 23.4 0.3 2 23 660 682 659 682 0.97

7 18 0.0037 0.59 11.8 0.2 1 23 689 712 689 712 0.97

8 18 0.013 2.2 10.0 0.0 3 23 722 743 721 743 0.95

9 18 0.00065 0.1 14.2 2.1 3 23 753 773 751 773 0.92

10 18 0.091 15 7.4 0.0 2 20 837 855 836 855 0.94

11 18 0.24 38 6.1 0.0 2 23 875 896 874 896 0.95

12 18 6.1e-05 0.0098 17.4 1.3 2 23 917 938 916 938 0.97

13 18 0.0017 0.27 12.9 0.2 1 23 960 983 960 983 0.94

14 18 0.26 42 6.0 0.1 3 23 1007 1028 1005 1028 0.94

15 18 0.12 19 7.1 0.6 2 23 1051 1073 1050 1073 0.93

16 18 7.6 1.2e+03 1.4 0.4 2 23 1096 1119 1095 1119 0.93

17 18 5.3 8.5e+02 1.9 0.0 1 23 1124 1147 1124 1147 0.87

18 18 0.012 1.9 10.2 0.1 2 23 1178 1200 1178 1200 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	8.7	1.4e+03	1.2	0.2	2	16	60	74	59	76	0.79
2	18	0.0047	0.74	11.5	2.9	1	23	339	361	339	361	0.98
3	18	0.0042	0.67	11.6	0.8	1	23	410	432	410	432	0.98
4	18	0.086	14	7.5	0.4	1	20	484	503	484	505	0.93
5	18	0.63	1e+02	4.8	0.4	1	21	517	537	517	540	0.74
6	18	7.6e-07	0.00012	23.4	0.3	2	23	660	682	659	682	0.97
7	18	0.0037	0.59	11.8	0.2	1	23	689	712	689	712	0.97
8	18	0.013	2.2	10.0	0.0	3	23	722	743	721	743	0.95
9	18	0.00065	0.1	14.2	2.1	3	23	753	773	751	773	0.92
10	18	0.091	15	7.4	0.0	2	20	837	855	836	855	0.94
11	18	0.24	38	6.1	0.0	2	23	875	896	874	896	0.95
12	18	6.1e-05	0.0098	17.4	1.3	2	23	917	938	916	938	0.97
13	18	0.0017	0.27	12.9	0.2	1	23	960	983	960	983	0.94
14	18	0.26	42	6.0	0.1	3	23	1007	1028	1005	1028	0.94
15	18	0.12	19	7.1	0.6	2	23	1051	1073	1050	1073	0.93
16	18	7.6	1.2e+03	1.4	0.4	2	23	1096	1119	1095	1119	0.93
17	18	5.3	8.5e+02	1.9	0.0	1	23	1124	1147	1124	1147	0.87
18	18	0.012	1.9	10.2	0.1	2	23	1178	1200	1178	1200	0.96

Sequence Information

Coding Sequence: ATGAACGAGATAATCGAGCCGCGTAATGTGGGAAACGTGTGCCGACTCTGTCTCTCAGCGCAGGAACCGAAGTCGTCGGTATTCGCCGACGAGGCGATCGCCGGTGTACCGTTGGCCACGAAAATACAGACTTGCCTGTCAATCGAGATTTTGATCAGCGACCGAGTGTCCACCTCCGTGTGTACCGATTGCTCGAAAAGGGTCGACGAGTGGTACACCTACAAGGAATACTGCCTGCGTTCGCAAGAAAAGTTGAAGCAATGCCTGACAGAGCCGTCCACGGATGGGGTGAGTAAAGCTCGGACCGATGCGTCGCGCAAGTTTGCAAATAAAAGACGCGTCTTTCTCTTTCCGTCTTTGGACGCGCAGCTCGCCAACATCAAGGCGGAGCCGCCCGACTACGAGGAGACGCCGAGTCAGCCGGAGACGGCCGACGCGAGCGACGACGAAGACGAGGATGCGCCGGACGATATACACGAGCGGCGTATAAAGCGAGAGGTGGCGGAGGACGAGAAAGCGGCGTGCGCCGCGTCGGTAGACGGCGGCCAGCTGCTGTTGAATCCAATGGCGGTGGGCGGTCAcagagaggaggaggaggaggatgacgacgacgacgggcGGGAGATAGACGCGACGGAGAAAAGTACGGGTTCGACGAGGCGAGGCGGCAGAAGAAAGCGCTCGAGGCGCGGCCGTCAGACTCACTTCCGAGGTTCGCGTCGCTACAAACAGAGATGTTTTCACTGCCAGATATATCTCCACTCCAAGTGGAGTTACGCCAAGCACACGGAGCGTTTTCACAGCGGCGATTTAGGACTGAGCGTCGACGCGGCTGTCGCCGAGCCGCTTGTAGTGCTGACGACCGAGAGCAATGACAAGAAGCGAAAAGCAACGGAGATGACGAGGGCCGACGACATCGAGGACGTGGAGGACGTGGAGGAGGAGCTCATAAGCCTGGAGAAGGATGCCCCTCTTACGCCGGTCCAGCGCAACATAATAAGCCAACTGAAGACATTTTCGTGTTACACGTGCGGTTTGTGCTTCGCCGATCGTCGCAGTACCTTGAATCACATACGTCAGCACATGCCCGATCTACGACCGTACACCTGTATCGCCTGTCTAACCGAGTTTGCCGATCGTTCCGTCTACAAATTGCACTGCGGCGCCTCGTTCGAGTGCGCCATGAAGATAGCCCTGGTCGTGCCGGAGCACGGTACGGAGAAATACTTCACGTGCAACATGTGCCTGCGTTCGTTGCCCAACAGGAAGGATCTACTGAGCCATCTGTCGAGGCACTCGGATCGCCAGTACGAACAACTGACCGCCGCGCCAccaccgccaccgccgccgccgccccCCCTACTTCCGGTCTCCGTCGCGAAGAGACGCAAGTTATCGCGCGATCGCGTTATTCCCGCGCCATACAAAAACGGCGATCCCGCTCACAATCACACGTGCCTCGATTGCGGAATGATTTATCGTTACAAGCAGAACAAACTGAAGCACGTTGCATTGTGCAAAGCATTGCCCGCCGAGAAGCGCATTTGCTACAGATGCGTCGACTGCGGACTCACGTTTCTCGCTTTTAACAAATTTCAGTCTCACGTAAATTTGGCCCACGGGAAACGTCAAATAGCGTGTCATCGGTGCGGCTGCAAATTCGCGGTTGATCATTTCTTGTCGCATTATCGGGAGCATTACGCAACGGAGAATTCGGCGGAAAGCGAGGACGCGCGAGGCTCCGCCCACGGGATGGATCTTTGGAGCAACGAGACAATGGGAGCGTTAACGACAATGACGACGAACAAACGTTGGAACGAGCCAACGACGGGTGGAATCTCGTACTCGACCAAGTCACGCGGGAGGCTCGTCGACGACGAATCCAAGATGGCCGGACGGGAGGAGGGCGAGAGGCGAATAGCGCGGGAAAACGGTCGTTACTCGATCAAAATGGATCCCGGTGGTAGCGGCGACGTCGAGTGTCGCGAGTGCGGCAAGGTGTTCGCCAATTATACGAATTTGCGACGTCACGCGCGTACCGTGCACGAGGACGGGGTCGGGCGTTACAGTTGTTTCACGTGCGCCAAGACTTTCGTGCGCGAGGAAGAATGGACGGAGCACGTCGAGACGGAGCATCGTCGGGAGGCCGAGCGCGCGGAAATATGTCCCCTCTGTCCTTCGGCTTTCGAGAGCCGCCAGGAGCTAATGCTCCATCGCCGTGCCGTACACGGCTCGAACGGCGAGGATCGCCTCGCCTGTTACATATGCGGCAAGTGTTTCGCCAGCGAGACATCACTCAAGATTCATCGTGGTCATCACTTTCGGGTGAATTCGAGGCTGAGCATCGGTGGCAAGATGGCCGAGCGAGCCAACGCGAGTCGTACGAGAAGCAGCCAAGATGGCGCTCACGTTGGCCCGTTGGTATCGCCGCGCGCGAGGAAAACCTTCCCGAACGGTGGTGGCGGAACGGGGAGCCCGGCGAACGCCGATCGTTCACGCGAATCCCTACAGTGTCAAGTGTGCGACGTACGATTCGACAATGTCGCGGATCTCGGTCGTCACTTGTGGGACGTTCATTGCTCGCGGGCCAAGCCCGAGAAGCCCTTCACCACGGATGAATTGCGCTGCGAGCTCTGCACCAACGTATTGCCCGACGAGGAGAGTCTCCGCAGTCATCTCGAGTGGCACGAGCAAAATCCAATTTTGAGCAACGCGAGAGCGCAAAAACGCGAGCCCGAGGTGCCGGTCAGATGCGACCAGTGCGGCAAGTATTACAGCTCGATCGGTAATCTGAGAAAGCACAAGAAGCGTCACATTGCTAGTGGCTGGTCGCCCGAGGGCTGCCGAGTGAGAAAAAGAGGCCCCCAAGCGGGTGGTTTCACGTGCGAGGTCTGTCGCAAGGTATTCGCCAGTAGGTCGATCCTAGCGAAGCACAGAGTCTCGGCTCATCCGCGCTTCGAATCGTCGCCACCGCCGCTACTTCCGTTTGCACCGCGCGACTCGAAAAAGTCCCTCGCCTGTCATCTATGCGGCAAAATTCAAGCGGACGTGAGGGCTCTCGCGAAGCACGCGCGTGTCGTTCACAAAATAAGCAACGCCAATTCGATTGTGATCGATCGACCGGCATCGCCACCACCGGCGCCACGTGTCTCGTGCACCCTCTGTTCCAAGTTGTTCGGCAATTTGGCCAACATGAGGCAACACTTTACCAAGGTTCACGGCAAAACGAGAATCGACAATCGAAACGCCCAACAGCATCAGCAGCAGTATCAGCCGCAGGAGCTTCGATGCGAGGTCGAAGGCTGCAAGCGTCTGTTCGAGTCACGCCTCGCCAAGCTCAATCACGAAAAGACCCACGTCAACGTTGTCTACACGTGCGCTCTCTGCCCACGTCACACACTCAATCCCGGCGCTATGGCCGAGCACATACTCGCCGCTCATCGGGCCAATCGCATCTCCGGCTACGACAAAATGACACTGTGCAAGAAGATGGACCTCGACAAGTACGTCGTTGTTGGGGCCAACGGTAGACAGTGTCCCGTATGCGCCATCACTTATCCCAATTACAAAGCTCTCAAGATACACTATCTCAAGATTCACGAGGACGAGGCCTCGTCGGTTTAG
Protein Sequence: MNEIIEPRNVGNVCRLCLSAQEPKSSVFADEAIAGVPLATKIQTCLSIEILISDRVSTSVCTDCSKRVDEWYTYKEYCLRSQEKLKQCLTEPSTDGVSKARTDASRKFANKRRVFLFPSLDAQLANIKAEPPDYEETPSQPETADASDDEDEDAPDDIHERRIKREVAEDEKAACAASVDGGQLLLNPMAVGGHREEEEEDDDDDGREIDATEKSTGSTRRGGRRKRSRRGRQTHFRGSRRYKQRCFHCQIYLHSKWSYAKHTERFHSGDLGLSVDAAVAEPLVVLTTESNDKKRKATEMTRADDIEDVEDVEEELISLEKDAPLTPVQRNIISQLKTFSCYTCGLCFADRRSTLNHIRQHMPDLRPYTCIACLTEFADRSVYKLHCGASFECAMKIALVVPEHGTEKYFTCNMCLRSLPNRKDLLSHLSRHSDRQYEQLTAAPPPPPPPPPPLLPVSVAKRRKLSRDRVIPAPYKNGDPAHNHTCLDCGMIYRYKQNKLKHVALCKALPAEKRICYRCVDCGLTFLAFNKFQSHVNLAHGKRQIACHRCGCKFAVDHFLSHYREHYATENSAESEDARGSAHGMDLWSNETMGALTTMTTNKRWNEPTTGGISYSTKSRGRLVDDESKMAGREEGERRIARENGRYSIKMDPGGSGDVECRECGKVFANYTNLRRHARTVHEDGVGRYSCFTCAKTFVREEEWTEHVETEHRREAERAEICPLCPSAFESRQELMLHRRAVHGSNGEDRLACYICGKCFASETSLKIHRGHHFRVNSRLSIGGKMAERANASRTRSSQDGAHVGPLVSPRARKTFPNGGGGTGSPANADRSRESLQCQVCDVRFDNVADLGRHLWDVHCSRAKPEKPFTTDELRCELCTNVLPDEESLRSHLEWHEQNPILSNARAQKREPEVPVRCDQCGKYYSSIGNLRKHKKRHIASGWSPEGCRVRKRGPQAGGFTCEVCRKVFASRSILAKHRVSAHPRFESSPPPLLPFAPRDSKKSLACHLCGKIQADVRALAKHARVVHKISNANSIVIDRPASPPPAPRVSCTLCSKLFGNLANMRQHFTKVHGKTRIDNRNAQQHQQQYQPQELRCEVEGCKRLFESRLAKLNHEKTHVNVVYTCALCPRHTLNPGAMAEHILAAHRANRISGYDKMTLCKKMDLDKYVVVGANGRQCPVCAITYPNYKALKIHYLKIHEDEASSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01102289;
90% Identity: iTF_01101576;
80% Identity: -