Basic Information

Gene Symbol
ZFX
Assembly
GCA_964007375.1
Location
OZ023312.1:80285841-80300650[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 1.4 2.2e+02 3.7 0.1 3 23 16 36 15 36 0.94
2 14 0.0039 0.63 11.7 0.7 1 23 1031 1054 1031 1054 0.97
3 14 0.0036 0.58 11.8 0.1 2 23 1067 1088 1066 1088 0.97
4 14 2.8e-05 0.0045 18.5 1.4 2 23 1091 1112 1090 1112 0.97
5 14 0.014 2.2 10.0 0.3 1 23 1118 1140 1118 1140 0.95
6 14 2.8e-05 0.0044 18.5 4.5 2 23 1147 1168 1146 1169 0.95
7 14 0.12 20 7.0 3.7 5 23 1182 1200 1181 1200 0.97
8 14 2.5e-05 0.004 18.6 1.5 3 23 1207 1228 1206 1228 0.97
9 14 0.014 2.2 10.0 0.5 2 23 1244 1264 1243 1264 0.97
10 14 7.5e-05 0.012 17.1 0.7 1 20 1270 1289 1270 1292 0.92
11 14 9.4e-05 0.015 16.8 2.7 1 23 1300 1322 1300 1322 0.99
12 14 0.0026 0.42 12.3 3.2 1 23 1328 1350 1328 1350 0.97
13 14 2.8e-06 0.00045 21.6 3.9 1 23 1356 1378 1356 1378 0.99
14 14 0.00034 0.054 15.1 7.2 1 23 1384 1406 1384 1407 0.96

Sequence Information

Coding Sequence
ATGGAGATCGGCAACGTCGGAGGGTCCGCGGGCGGCGCGGTGGCCTGTCCCGTTTGTACGCTTTACCTGCGCGAGGGTATAAGCCTCCAGAGGCACTTGGACACGCATCCCAAGGAGCAGGTCATAGAGGCTCTGATAAAGGCTAGTTCTTCGCCGGCGCCTACTCAGCCGCCCAGTCAGCCTAACGTAGCAGCGCAGAATGGCATGCAGCAGCAATTGAACGCGAATCCGTCATTACCCGCTCAATCGCCGTATCCCGTCTTCGAATGTCCGCCTATAAACACGATGATGCCGCCTCAATTTGCCTCGTTCAGTTATCAACAGTTTGTGAACAACGGCACGATGATGATACCGCAGTACGCGATGGCGCCGCAGGCCAATCAGATGATGCAGATGCTGTACAATCCTTACGGCATGTATCAGCAACAACAGATACCCACCGTGCAGATGATATCGCCCATCGCGGCCATACCCGCGACTCGCATGAGGCCCGTCGTGTCCGTGCCTAACGACGCCAACAGCCGAGCCTCCATGGAACATCTCGGCGGACAAGAGGCCAAACAGGTGGGCACCGATCTCATATCGGAGGCCGACGACGCGGAGAGAATTCTGCCGGACATCGAAACTATGCCGAGGACGCAGACGCCGGCGAGCGCGCCGACCGCGGACGAGGCGCCGAGCGGCGCTTGCGACGAACAGCGGGAAGACTCGGCGGCCATGGGACACGGTGAAACGCAGAGTCGCGAGACCACGAGCCAACCGGCGGCGAGCGAAACGTCCGAGCGTCGCGACTACGACAGGGTGGCCCCGCCAGATGTCAGCTGCGAGACTAACGCGGAGGAGAAAGAGAGCTCGGCGATGGTCGACGAGACTCTCAGGAGGGAAGACGCGAGGGGCACCAACGAGACGCGAGGCGAGAGCAAACTCGGGAAATTCGTCGCCGAGGAGACACGGGCTTTCGATCAAGTGTACGAGGATGAGATCGGCGAGAAGAGCAGCGGCGAGAACGACGCGGAAAATGGTCACGAGGAAGAGGAGACGGGCAAGATCGAGCGGAGAGAAATAACGACGCCGTCGACCAAGGACGAGATGGACGAGTCCGAAGTCGTCGAGACGCGGCAATGCCACGAAGAGAACGCGGCCGAGGCGAAGGAAACGAGCCAACCGGAAGTCGAACAACTGGAGAGACTACTGATAACGATAATGGAGTCGAATTTCGATACAACGACCATGAGGCTCAAGAGCGACGAGAACTCAACGAGAACGACGATGAAGAACGAAACCGAGACAGAGGCGACGAGCAACGAGCGAGAAATCACGGAATCATGGTCCGACGAGAAGAGAGAAGACGAGCAGTGTAAAAATTACGACGATGGGCAGAACGaggtttacacgaagaacgacGAGATGGGCCAAATCGAGCAGTGCCTCGACGAATTGGAGAATAATTTCGATATGCCTTATCGTTACAGATGCAGCTTGTCGGCTCCCTCGTCGCCGCTAGTCGCGAAAAAATTACGCAGAACTTGCTCGCTCAATTGTGATTATCGTTCTAACGAGAATTTGATATTTTGCAACGTCGACTTCGAGGCGATGCCGGCCAGCGAGGAGGATCACGAGGCTAAGAGCACGGAGGACAACTTCGAGGAGGAAGACATGGAAATCGAGGAAGAGATAGCCAGCCCGCGTACGCCATTTGGCAAACAAGACGATCCGCTGGAGTCGAGCAGGTCGCGGACACCCGCGATTAGCGGCGTATCCGGTTTGCCCGAGGACACGGAAGTCAAGGAAGTCGCCAGCGAAAGCGCCGCGAGAACGTTCTGTCCAATGGACATAGCGAGCTCGAGCGGCGAAGAGGACGACGAGGAAgacgaggacgaggacgaggacgaggaAGACGAGGATGACGAAGACGACGAGGAGGATGACGAGGTGAACGAATCCGTTGGCTCGTCCTTGACGAAAAATGGCCATGAACGGTCGATCAACATTCAGGACACCAAGGCCGAACTTCACCAACATCCAATGTCCAGTGACGAGCGTAAAAGCGACTCGGGCCAACAgatttatcatcatcatcatcatcagtcGGTCATAACGGAACACGTGAGCTCTTTCACGACGATCAATTCACAACAGCCTCTCATTATACACGAGGGATACTCGATGGCCAGCCAAAAGTCCATGCTCCACGAGAATATAATGAATCTCACGGAATTGGCCGATCCAACGACGAGCATCGAGTCAAAGAGCTCACAAGCAGCGACGAAAACGACACTCTTGAATCATGCCCAATCCACCGAACTTCTCAATATCAACGAGAACGCCCACGCTGGACCgatgaacgttttcgaattcGACGGACTTCAGATATTAGTTCCTAGTACATTCATAAGTGAATCGTCGCAGAAGGCGATAAGCGCGACGAGCCAACAGTCGATGGCGAGCAGCGAAGGGGGCGCGGGCATCGACGAGGAAGTCAAGAGCGTCAATATGCGCGCGGACGAGACCATGCCACCGAGGGGCGAATTGTCGGAGCAGGAGAGCAACGGATGCACCGAACACTCCGCGTGGCAGTTGTACATGGGCCAAGAGTCATCGCGCATGTCGACCTCGTACGACCTGATGGCTCGGGAGAGTTGGGAAGAGTCGGAGGGTTCGGACAACGAGGTCGGTGTGCCGCTGTTGGACAGCAGATCCCTAGCGACGCACTTCACCTCGAGTTTGTTCTTGGACCGAGATCGCAAGACCCCAACGAAGCGAACCTTCAAGTGTTCCCAGTGCGCGGAGGTGTTCGACTGCCCGAAGGAGCGTCGGGTGCACAGTACAGCGGTGCACAAAGAGGCAGGTCCAAGTGGCAGCAGCGATCCAACCGATCACCCGGAAACGAAGGACATCAAATTGCTGGAAGGTCGAACGAACGTTTTCGACGACATATTCGTATCCGGTATTCACATGCAACAATCTCTCTACCATCATCAGCAGCCTCAGCAGCCGCCATTGTTGCATCAACTGCAGCCTCCCCAGCAGCCGGACATCGCGAAAGTCGAGGTAGACCAGAAGAGCGACGCGTTGCCGCAGATCCTCGATTTCTCCTGCGCCATGTGCAGTCAGCGTTTCGCGAGCGAGCGATCTCTCCAGTTGCACAATCGTCGCGTGCACGGCACCGAGGTAGCTCGTCGTCTCCAAGAAATATCAAAGTGCCAGATATGCAACGAGGAATTTCCCTCGGTGATGCTCTTCAACGCTCATCTCAAGATACATCCGCTCGAGTGCGCTCAATGCGGCAAATACTTCTATCGAAAGCCAAATTTCAAGCTTCACATGAAGCGACACTTGGGCATAAAGCCCTTTCCCTGCACGGTATGCGACAAGGCCTTCCTAACGAAGCAAAAACTCGACGAGCACACGAACGGCCACACCGGCAATGCCCCCGTCAAGTGTAACCTCTGCAACGAGACCTTTCGACGCTACTCGAATCTGACCCAACACAAGAATCGCCATCATCTCAATATTAAGCGCAAACTCAAGGATTACATATGCCATTGCGGCGAGGTCTTTCACACGAAGAAGAAATTAGCCTGGCACAAAGAGACCCACGACGAGAAGCCGAAAGCTTGCACCTACTGCAACGAGAGATTCATACACATGGCGAGCCTCACGCGACACATGAGGCGGGCCCACAATCGTCGCTTCGTGCCCGATGCTCAACGCGAGAGCGAAAACGTCGAGTGCCCGATATGCAAGTGCATATATCTACGCTCATCCCTGTCCGTACACATGAGGGTACACAACGGCGAGAGACCGTACGAGTGTCAGGTGTGCTCCAAAGCTTTCAGTACCAAGTGGAATCTACAGTTGCACAAGTGGACACACGCCGCTCGTAGCACCAAACCGTTCAAGTGCAATCAGTGCAGTGCCGCATTTTATCGACACAGCGATTACACCGCTCACATGAATTCACATCGTAACGTAAGGCCGTACACGTGCAATTATTGCGGCGCCCAATTCATAAGAAAGTACAATTGCCTGAGACACGTGAAGGAACACGAGGAGAACAAGGCGTACACGTGTGACATTTGCAACAAAACCTTTCATCGCTCATATTACCTCAAGGATCATCTGCGCGTGCACTCGGGCGCCAGACCGTACACGTGTCACATATGTGGCAAATCCAGTAGCACCAAATCCAATCACAACAAACACGTTAGAATTCATCATGCGCGGGAGCCTGTCAATACCGAGAATTAA
Protein Sequence
MEIGNVGGSAGGAVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASSSPAPTQPPSQPNVAAQNGMQQQLNANPSLPAQSPYPVFECPPINTMMPPQFASFSYQQFVNNGTMMIPQYAMAPQANQMMQMLYNPYGMYQQQQIPTVQMISPIAAIPATRMRPVVSVPNDANSRASMEHLGGQEAKQVGTDLISEADDAERILPDIETMPRTQTPASAPTADEAPSGACDEQREDSAAMGHGETQSRETTSQPAASETSERRDYDRVAPPDVSCETNAEEKESSAMVDETLRREDARGTNETRGESKLGKFVAEETRAFDQVYEDEIGEKSSGENDAENGHEEEETGKIERREITTPSTKDEMDESEVVETRQCHEENAAEAKETSQPEVEQLERLLITIMESNFDTTTMRLKSDENSTRTTMKNETETEATSNEREITESWSDEKREDEQCKNYDDGQNEVYTKNDEMGQIEQCLDELENNFDMPYRYRCSLSAPSSPLVAKKLRRTCSLNCDYRSNENLIFCNVDFEAMPASEEDHEAKSTEDNFEEEDMEIEEEIASPRTPFGKQDDPLESSRSRTPAISGVSGLPEDTEVKEVASESAARTFCPMDIASSSGEEDDEEDEDEDEDEEDEDDEDDEEDDEVNESVGSSLTKNGHERSINIQDTKAELHQHPMSSDERKSDSGQQIYHHHHHQSVITEHVSSFTTINSQQPLIIHEGYSMASQKSMLHENIMNLTELADPTTSIESKSSQAATKTTLLNHAQSTELLNINENAHAGPMNVFEFDGLQILVPSTFISESSQKAISATSQQSMASSEGGAGIDEEVKSVNMRADETMPPRGELSEQESNGCTEHSAWQLYMGQESSRMSTSYDLMARESWEESEGSDNEVGVPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCSQCAEVFDCPKERRVHSTAVHKEAGPSGSSDPTDHPETKDIKLLEGRTNVFDDIFVSGIHMQQSLYHHQQPQQPPLLHQLQPPQQPDIAKVEVDQKSDALPQILDFSCAMCSQRFASERSLQLHNRRVHGTEVARRLQEISKCQICNEEFPSVMLFNAHLKIHPLECAQCGKYFYRKPNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKRKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLSVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDICNKTFHRSYYLKDHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01102260;
90% Identity
iTF_01102260;
80% Identity
-