Oobs001088.1
Basic Information
- Insect
- Ophion obscuratus
- Gene Symbol
- lov
- Assembly
- GCA_964007375.1
- Location
- OZ023312.1:20826553-20831482[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6e-16 8.6e-13 48.9 0.0 1 44 528 571 528 572 0.95
Sequence Information
- Coding Sequence
- ATGTCGAGCACCGCGGACAGCCCGGACGCGGCGATGGCCCTGCAATCACACTATTCCCTTCGATGGAACAATCATCAGACGCACATATTGCAGGCGTTCGAGGCCTTGCTCCAGGCCGAAATACTCGTCGACGTCACCCTCGTCTGCACCGAGACAAGCCTCAGAGCTCACAAAGTCGTTCTAAGTGCCTGCAGTCCCTTCTTCGAGAGGATATTCGCGGAGCATCCGTGCAAACATCCGGTAATAGTGCTGAAGGACTTTCCCGGGCGGGAGGTGACGGCTCTGATCGATTTCATGTATCGTGGTGAAGTTCGGGTGGGACGGGAAGAGTTGCCGGGTCTGATGAGGGCAGCGGAGAGTCTACAGATCCGCGGTCTCGTATCATCGGAGCCGCGACCGGCGAGTCCACCGGAAACGCCAACGACGGAGCTGCTCGGGGAGCCATCGACGCCCGAGGGTGCAAGACAGGGTAGCCCGCTGGACGAGGATCATTTGGAAACGACCGCGACGCGTATCGATACACGAGACGGTATTGTCCAGCGTGAAAATCGTCTACCGCACATGGGCCATTTGAATTTTTCAGTACGAGATCTCCGGGATTTGTGCGGTTCACCTTTATTGCCAAGAAGAAAGCAGGCGAGGCCTCGAAGAAGATCGGGCGAATTGGTGGCCCAGGACCTCAGTCGACCTCATCCACCGCCGAGTCTGAGTCCACCGAGCGGTTTGAATTTGGCCGGAGCAAGGCAAGAGCTTCACGCCTCACCGACCTCGTCATTGGCGACGACGCTTGGCCCGCCCAACATAAACAACAACAGCATACATCAGCATCAGCCATTGGGCGAGGACATGGCGGAGAATCTGTCATTGAAGAGACCACAGAGCCCGGAATCTCTCTCGGACAACAATCGTAATCAGCGCATAAAGATCGAGCGGGAACAACCGACGAGTCCACGATGTTCGCCTCTAGCTGCCAATCCGGGCATTGACATAATTGACCTCCAGGAGCTTCCGATCGGCGGTCATCCGGGGATGCCTGCGATGTCGACGACACCGCCGCATCATCCCAGTGAGTACCTGACGAGCCTCGGCCAGTTGGCCGCTCAGTGGCTCCCAAATCCGAACCACCTGAGCCAGTCGCATCTAACGAGCGAGGGCAGTCCGCACAGTCGGAATCAGCACAATCATTATCAGCATCAACAGCAGGCCCGTGACTCACAACAGTGCAGGGAACAACACGAGCAGCAGCACATGCAGGAAGAGATCGCGTTACCATCGATAAGATCGGTGGCGGTTTTTCCAATGGACGGTATGTCACCGGTAGGCAGCGCGATGTTTCCCCACGGCGGTGGACTCGAGCGTGGCTCTTTGCTGGCCGATCTACACGACAGCTTCAAGCCCGAGGCCCTGCACAGTCTATTCGGCAGGGCGAGCCTCGGCCATCATCCAACCAAGAAATCCAAGAAGCATCGAAGCGAGAGCGCCAGCGCCCGAAGATGGTCCGAGCAAGGACGCGGTGGCATGCCGATCGGTAGGCCCAAAGGCCAGCACAGCGCGCCACGCGGTGGACCACCCAGGTCGTGGACGAACGCCGAGCTCACGATAGCCCTGCAACACGTCTGGAACAAACAGATGACGACGTCCCAAGCCAGCCGAATGTTCGGCATACCCTACAACAGCCTGCTGATGTACGTCCGCGGCAAATACGGCAAGAGCCTCAAGCTTGAGCAATTGAGGAGGGATTGCACGGGCGCTACCGGCGAAGTTATGAACTCCCTGAACAACAACGTCAAAGCGATTCAGGGCCCGCCCCAGCTGAGCCATCCACTTGCCGGCTTGCCACATCCAGCCGACGACGGTAGCTTCGCCCATCATCCCCTGCTCGGTGGTAATCTTCCCCAGGGATTCTTCACCGATTACAGCGCTGCGTTTCCCGTGCCTGTCAGCATGGTCCACCTGCTACCGCCCAGCGAGCAAAAGGCACTCGAGTCCGCCGCTGCCAGTCTCGCCGCCAATTGTCCACCGGTACTCGTCGAATGCCCATCCGGCAGTCCACCCGGGAGCGAAATCGCCCACAGAAGTCGCACACCCTCGCCACTCGACAACCATCACGagacttcgtcgtcgtcgtcggtcACACCACAGGCACCACAATCCGCGCCTGCTCTCTTGCAGCAGAACGGCTCCGATTGA
- Protein Sequence
- MSSTADSPDAAMALQSHYSLRWNNHQTHILQAFEALLQAEILVDVTLVCTETSLRAHKVVLSACSPFFERIFAEHPCKHPVIVLKDFPGREVTALIDFMYRGEVRVGREELPGLMRAAESLQIRGLVSSEPRPASPPETPTTELLGEPSTPEGARQGSPLDEDHLETTATRIDTRDGIVQRENRLPHMGHLNFSVRDLRDLCGSPLLPRRKQARPRRRSGELVAQDLSRPHPPPSLSPPSGLNLAGARQELHASPTSSLATTLGPPNINNNSIHQHQPLGEDMAENLSLKRPQSPESLSDNNRNQRIKIEREQPTSPRCSPLAANPGIDIIDLQELPIGGHPGMPAMSTTPPHHPSEYLTSLGQLAAQWLPNPNHLSQSHLTSEGSPHSRNQHNHYQHQQQARDSQQCREQHEQQHMQEEIALPSIRSVAVFPMDGMSPVGSAMFPHGGGLERGSLLADLHDSFKPEALHSLFGRASLGHHPTKKSKKHRSESASARRWSEQGRGGMPIGRPKGQHSAPRGGPPRSWTNAELTIALQHVWNKQMTTSQASRMFGIPYNSLLMYVRGKYGKSLKLEQLRRDCTGATGEVMNSLNNNVKAIQGPPQLSHPLAGLPHPADDGSFAHHPLLGGNLPQGFFTDYSAAFPVPVSMVHLLPPSEQKALESAAASLAANCPPVLVECPSGSPPGSEIAHRSRTPSPLDNHHETSSSSSVTPQAPQSAPALLQQNGSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00262575;
- 90% Identity
- iTF_01103690;
- 80% Identity
- iTF_01102944;