Oobs034964.1
Basic Information
- Insect
- Ophion obscuratus
- Gene Symbol
- KBTBD4
- Assembly
- GCA_964007375.1
- Location
- OZ023323.1:35608631-35619500[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.6e-05 0.12 13.2 0.0 2 38 198 234 197 240 0.84 2 4 8.9e-11 1.3e-07 32.4 0.0 5 39 251 284 248 291 0.85 3 4 0.0053 7.6 7.4 0.0 6 35 304 332 299 337 0.83 4 4 1.3e-09 1.9e-06 28.6 0.1 4 38 362 396 359 402 0.91
Sequence Information
- Coding Sequence
- ATGTCAGACACAATAATAGAGAGCACGAGCGAGCGTGAACACGAGGAGAGTTATTTCAAATGGACGAACCATCAGAATCACTTGACGGACGTCGTTCGACAGCTTTTCGAGGAGGAATGCATGGTCGACGTGACTCTCGTCGCGGACGGGGAACGCATACAAGCCCATCGTATTGTTCTGTGCTCTTGCAGCACTTTGTTTCAAGAGATCTTTAGCCAGGCTAACGGCGAACACGCTACAATTATATTGACCGACATATCAGCGCAGGATGTCAGATCCATTGTGGAATTCAGCTACCACGGCGAAGTGAGAATTCCCGTTGAGAATATCAGCAACTTACTGAAGGCTGCCCATTCTCTGAGAATTTGCGGCCTTATGGAGATCGACGGACTGGACGAGAACGACGCGATAATAAGCGCGAAAGAATCGAAGGACGAGAACAGCAGCGAGTCCTTCGAGGAACTCGACGAATGCGCGAAAGACGCGCCGGAAATTCCCGAGGACTCGTCGAGTGACGGTCAGCGAAAGACGAAAGAGTCAGCCGGGAAGAGCAAGAGGCGCAGGAAGGATCCATTGAAACGCGACTACGACGACGAAATGCTCGCTTCGGCGATAAACGATCTGAAATCGGGGCAAACTCTCGTGGAGGCTTCGATAAAGAACAACGTGCCGCGCTCGACCCTCTACATGAGAGCCAAAGCACTCGGCATTCAGTTGAACGCGTCGAGAAACGAGTATCCCGCTGAGTGCATGAAAGCCGCTATAGACGCGGTTGTAGAGGGCTCGAGTTTGCAACACGCCGCGGACAGATTTTTCATACCGAAAACCGTGCTCTGGCGACGCATACAAAAGGAGGGCTATCAAATCTTGCGCGCCGAGGTGAGGCGCTCCTACGGTAGGGAAAAGCGCGAAGCCGCGGTCAAAGCGCTCCAACGGGGCGAAAATTTGACCAAAGTCGCTAAAACATTTCAGATACCAAAGACGACGTTGTTTCGCGAGAAAGCGCGGCTGGTCGACGAGGGAAAATTGCCGGAATCCTTTTGGAAGAAACGCAAGACCGAGAACGAGGAATGGAAGAAGTCGCGTCTCGAGGAGGCGGTGGCGGTTTGCAAAGCGGGCAAAATGTCACAAGCCGCGGCGGCCATGAAGTACCGAATACCGAAAACGACCATATGGCGAAAGCTGCAACAGGACGGGAAGACTACCGGACGCGAGACTAACGCGCGAACGGTCGAACACTCGTTTGACGACGAGGACAGCTCCATTAAGAACGAGCAAGAAAATACCGAATTTTCTTTTTGCGAGGTATCCTCGGAAATTCCAATAACGTACATAGACCAGAACCTCGGGGCTGATTCCGTCATAATATTGACAACGGAAGACGTCGATGGCCTGAATCTGGACGAGAGTAGGCAGATAATCGTCAACCAGGATTCCGGACAGGAGTACGTGCGATGCGCTCTCGACATATCCGACAACACGGGAAGTTCGGAGTATCAGCCGGCGGAGAGCTAG
- Protein Sequence
- MSDTIIESTSEREHEESYFKWTNHQNHLTDVVRQLFEEECMVDVTLVADGERIQAHRIVLCSCSTLFQEIFSQANGEHATIILTDISAQDVRSIVEFSYHGEVRIPVENISNLLKAAHSLRICGLMEIDGLDENDAIISAKESKDENSSESFEELDECAKDAPEIPEDSSSDGQRKTKESAGKSKRRRKDPLKRDYDDEMLASAINDLKSGQTLVEASIKNNVPRSTLYMRAKALGIQLNASRNEYPAECMKAAIDAVVEGSSLQHAADRFFIPKTVLWRRIQKEGYQILRAEVRRSYGREKREAAVKALQRGENLTKVAKTFQIPKTTLFREKARLVDEGKLPESFWKKRKTENEEWKKSRLEEAVAVCKAGKMSQAAAAMKYRIPKTTIWRKLQQDGKTTGRETNARTVEHSFDDEDSSIKNEQENTEFSFCEVSSEIPITYIDQNLGADSVIILTTEDVDGLNLDESRQIIVNQDSGQEYVRCALDISDNTGSSEYQPAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01102940;
- 90% Identity
- iTF_01102940;
- 80% Identity
- iTF_01102940;