Basic Information

Insect: Ophion luteus
Gene Symbol: -
Assembly: GCA_944452655.1
Location: CALYBV010002337.1:20055-22491[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 8.7 1.1e+03 1.0 0.0 5 23 291 309 290 309 0.93

2 9 0.017 2.1 9.6 2.7 2 23 319 340 318 340 0.94

3 9 0.00012 0.014 16.4 1.9 1 23 469 492 469 492 0.95

4 9 2.5e-05 0.0031 18.5 3.2 1 23 524 546 524 546 0.98

5 9 0.00071 0.086 13.9 6.2 1 23 560 582 560 582 0.96

6 9 0.00014 0.018 16.1 5.6 1 23 588 610 588 610 0.98

7 9 0.00083 0.1 13.7 3.1 1 23 616 638 616 638 0.98

8 9 0.0037 0.45 11.7 8.4 1 23 644 666 644 666 0.91

9 9 0.00019 0.024 15.7 0.3 1 21 672 692 672 693 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	8.7	1.1e+03	1.0	0.0	5	23	291	309	290	309	0.93
2	9	0.017	2.1	9.6	2.7	2	23	319	340	318	340	0.94
3	9	0.00012	0.014	16.4	1.9	1	23	469	492	469	492	0.95
4	9	2.5e-05	0.0031	18.5	3.2	1	23	524	546	524	546	0.98
5	9	0.00071	0.086	13.9	6.2	1	23	560	582	560	582	0.96
6	9	0.00014	0.018	16.1	5.6	1	23	588	610	588	610	0.98
7	9	0.00083	0.1	13.7	3.1	1	23	616	638	616	638	0.98
8	9	0.0037	0.45	11.7	8.4	1	23	644	666	644	666	0.91
9	9	0.00019	0.024	15.7	0.3	1	21	672	692	672	693	0.93

Sequence Information

Coding Sequence: ATGAATATTTCGAGCGGAATTGATGTTCCATTGAAAAACAATGACACTGTGTGCAGAGTTTGCTTGTCGTCCGACGAAGAAAACAAGTGTATTTTCACTTCACACATGACTTTTGGAAATCGCAATTCCGCAGATTTGTGGGAGAAATTACAGTTTTACGGTGGGATCGAGGTTAAGCAGGGCGATGGTCTTCCGTCGAAGATGTGTGAGAAGTGCGTCATCAATATACGCGTTGCGCATGATTTTCGAACTCTGTGTCAAGAAAGTGACGTAAAATTGCGGCGCCTATATAGAAAGGTGGTAAGCGATGGTCACTGCGATTCAGCGAAAGGGCTCAGAGGCGACAAATCGACGGCAGGCGAGTCTGTACACAGCTACGATGTTTGGGACACCCCGAGAGGAAGTGTAACATCGCAGATCACCGTGTTCGATCGTGCTGTCAAAATGAGAGATAACGAATGTCTGCGAGGCACCGAAACGGCTCTGACGACTCGTGCAAAAAAATCGACAACCTCCTCGGACGATAAGAGATCAAGGGTCGAAGTGCGAAAATGCGAAATGGCGACGAGCGATGAGCTGAACAAAGAGGAGCACGCGAAAGAGGCATCCAAAAGATTGATAGTCTTCAGGAGAATAACCTCGATGGAAAATTTGAAAAATTGCAAAGAGCTGCAGAGGCGGTACCTGAAAAAAACTAAAGCCTCGAGGAAGAACGAACGAGATTGTGAAGTCGCGCGGAACTCCGTCGGGCGGAGAGCTCTCGAAAGAGAACTCGCAATCTCACGCTATGGATATAGCCAATCCTACGAGGGCGATAAATCCTCGAAAGAGTGTCGATTCAGTCACGCTCCTGACAGATTTTCTCGCGACCACTGCGAAGAGGAACTCGACCGACCCGCTGAATTTTCTGAGCACGTTGAAAGTCACGAATCGAAGGAACCGCTCGAGCCTTCGAGTTGCAAAATTTGCAATAAGAATTTTCGCAAGCTCCTCACCATGGTGAGACACTTGCACGCTCACAAGAGAGAAAATCCCGTCGCCGTGTACGCGATTTTGCGTGACATCAGGGAAAAAAGAAGGAGGAACAATTCAATATTTGAAAATGAAAATAACGTGACTCGCGAAGCTGCGCAGAGGAAAAGGCTGTCGAACGTTCGTATCGAAAGTTCATTCCGACTGGATAAATCGAGTGTAGATGTATCAGAATCACGAAAAGATGTAAATTTCGTAACGGAAGCGTGGAACGTCGATTCGAATGGTACTAACGAGACGGAATTCTCGGATTCGTCTCGAGCGTACGACGTCCCCGACGAATCGGCATTTCCGAGTGACGATAGATCGGCGATTAAATTAATCAATATTTGGATTCGCGAAGAGTTGAATTCAGAAAACGAGGGCAAACGTTTTTTCTGCAACATATGCAAGAGATCGTACGTTACCAAAGGATCACTGTTGAAGCATAAATCCAAGATACACGATGATTCTCCTGGACGCGACACTTGCTCTCAGTACTCTATCGGTCGGGACAAAATTCGCGCAAGCAGACGTAAGCTCGAAGAAACGAAAGGCCATCGTTGCAAAGATTGCGAAAAGTCGTTCGAGAACGAGACGAAACTGGCGAAACACAGGAAAATTCACATCCGCGACAACGAACTCGAGGACAAAAATTTCAAACGTTTTTTGTGCCACATATGCAGCAAAACGTTTCGACACAATACGGGCTTGATGTTTCACATGAGAACGCACACGGGTTACAAGCCTCACGTGTGCAAATATTGCGGTCGCGGATTTACGTCCAACTCGAATTGCACGAATCACGAGCGTACGCATACCGGCGATAGGCCGTACGTTTGTCACTTTTGTAGCGCAGCGTTCGCAAAATCTTGCACCCTCAAGGCGCACATAACGACTCACACCGGTGAAGCAAATTACCACTGCAAAACTTGTGGCAAATCGTTTCGTAGGCTCAAGTACCTAAAGGAGCACTGCTTCACGCATACCGGTGAAAAGCCGTACGCGTGCAAGATTTGCGGCACGGCCTACAGTCATTCGGGTAGTTTGTTCGTTCACGAAAAGAAGTGCAAAGCCCAATATGACAATTGTCAAGTGACGACTATGGGAGATTATGCCGATGGAAGAACGCTCGTTCATCCGTCCAATCTCGCTATTGATCCTGCGATTTTGTCCATCCCGAATACAGATAATATTCCGTTGAATGTCGCAGAGAATGGAAGATTCGTCAACGACGCGCGGATACTGGATCGGGCAAATGACAACGTTCATTCGAGCCTGCCAAACGGACCCTCGACCGTGCGGAACTTCATCGCTCTGGGCCAAATCTTCCAAGCGTAG
Protein Sequence: MNISSGIDVPLKNNDTVCRVCLSSDEENKCIFTSHMTFGNRNSADLWEKLQFYGGIEVKQGDGLPSKMCEKCVINIRVAHDFRTLCQESDVKLRRLYRKVVSDGHCDSAKGLRGDKSTAGESVHSYDVWDTPRGSVTSQITVFDRAVKMRDNECLRGTETALTTRAKKSTTSSDDKRSRVEVRKCEMATSDELNKEEHAKEASKRLIVFRRITSMENLKNCKELQRRYLKKTKASRKNERDCEVARNSVGRRALERELAISRYGYSQSYEGDKSSKECRFSHAPDRFSRDHCEEELDRPAEFSEHVESHESKEPLEPSSCKICNKNFRKLLTMVRHLHAHKRENPVAVYAILRDIREKRRRNNSIFENENNVTREAAQRKRLSNVRIESSFRLDKSSVDVSESRKDVNFVTEAWNVDSNGTNETEFSDSSRAYDVPDESAFPSDDRSAIKLINIWIREELNSENEGKRFFCNICKRSYVTKGSLLKHKSKIHDDSPGRDTCSQYSIGRDKIRASRRKLEETKGHRCKDCEKSFENETKLAKHRKIHIRDNELEDKNFKRFLCHICSKTFRHNTGLMFHMRTHTGYKPHVCKYCGRGFTSNSNCTNHERTHTGDRPYVCHFCSAAFAKSCTLKAHITTHTGEANYHCKTCGKSFRRLKYLKEHCFTHTGEKPYACKICGTAYSHSGSLFVHEKKCKAQYDNCQVTTMGDYADGRTLVHPSNLAIDPAILSIPNTDNIPLNVAENGRFVNDARILDRANDNVHSSLPNGPSTVRNFIALGQIFQA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01101618;
90% Identity: iTF_01103086;
80% Identity: -