Basic Information

Insect: Ophion luteus
Gene Symbol: SCRT1
Assembly: GCA_944452655.1
Location: CALYBV010000597.1:5285-10428[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 2.3e-06 0.00028 21.7 2.9 1 23 547 569 547 569 0.98

2 5 0.031 3.8 8.7 0.2 2 23 579 600 578 600 0.94

3 5 1.5e-06 0.00018 22.3 0.4 1 23 604 626 604 626 0.97

4 5 5e-08 6.1e-06 27.0 0.6 3 23 634 654 632 654 0.98

5 5 4.6e-06 0.00056 20.8 1.1 1 21 660 680 660 681 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	2.3e-06	0.00028	21.7	2.9	1	23	547	569	547	569	0.98
2	5	0.031	3.8	8.7	0.2	2	23	579	600	578	600	0.94
3	5	1.5e-06	0.00018	22.3	0.4	1	23	604	626	604	626	0.97
4	5	5e-08	6.1e-06	27.0	0.6	3	23	634	654	632	654	0.98
5	5	4.6e-06	0.00056	20.8	1.1	1	21	660	680	660	681	0.95

Sequence Information

Coding Sequence: ATGCCACGATGTTACATGGTGAAGAAAGCTCTATGCAACAAGTATATGAATGCTGCTAGAGGCTTTGAAAGCTGGGGACGTTCCGGAAGAGACAGCTCGCCTTCGCCAACAGCGATGCAATTGCTGGTGTCGCCTATTGAAGCGTGTACCGCACTTCCTGATGCCCAAGAATGTCTGTCATCACAATTGACCGATTTTACGGCCTCGGAAACGTTAACAATCCCGGATAAATCGACGCCAGAGATATCGGAAGTCAATATTTCTCCGTGCACGGCCTCCTGTTCACGTAGAACCGACCTGGCAGAATGTTCCACAATTACGGGAGTTACGACCTGTCCGGCATCGCCGCCGTTACCTGATAGAGAAACGTCAAATCGTCATCATCACTATGAGCATCGAGAATCTTCAGATTCCATGACCAGTTCGTCGCGGACCACCTACATGATCGAGGTCACCGGCAACGGAAGTGGTAAACCGAAAGGTTTATCATTCGATTCATCGGCCAACACGACGATGGCGATAGCAGCATCAACAACAGCAGCAGCAGGGACAACAATAACAACAACGGTATCAACGACGACAACAACAACAACTACTACTACTACAACAGCGTCAACAACAGCAAGACGAACAATGACCAGGCGATATCGCAGTAGAACCAGCTGTTTATCTCCAGAAGTTGTCCAATCGTCCAAGCAGGTGTCTATAGAAACGATACAGCATACAGATCCCCAAAGACTACAAGGACCGCTTCAAAGTGATCACTCGACAAACAGCGTTGACTCTGCGATAGTGAATACCTCGTCCGTAATCTCGACGGATTCATCCGATCAATTGTGTTACACAAGGCTAAATGACACCAAGAATCAAAATTGCTCATCAAATTGTCTCGACGTGGTCGTTCCTGTTGAAACAGCTTGTCAATTCACGAGGTGTAGTGCCATCCAAGAGCCTCCTATATTTCGTGACAGATCAGCTGCGGAAACCGAGGCAGCCCACGATCTTCTAGAACTTTCCCGCTCACTGCCTCCGCTTCCACCACCCAGCATTGCTATTGGTCCGCAGAATGTGATCGAAACACCACCAACCAACAACGTTCAGGAAATCAGTATTTATCAACCCGCTCAGCAACCGCCGATATATCAATTGAACACCATAGATCTCAGCAGTGGGACGGCAACCGTGTATCAGCAACAACCTTCGGGAATAATGTATGATCCTGTATCCTCCGCCACCTTCGTACAACAAACCTCGACCGGAATGTTCATCCCGTTATCACCAGTCCAAGAAATACTCTTCACCTACGCCAACGCGCCAAATGGAATCCCGTCGATACTAGCTACTCAACCTCCACCGATCGAAGCACCACCACTTACACCACCGGCCTCAGAGTGCAGCAGCGATATCGAGAACAGTAATCCAAATTCTCAGCCCCCAAGTCTGAGGGACAAGGAGGTTCAAACTATTACGGACCAGCCCGAGATCAAGGCCGGATCATACACGTACGATACGCTCTTAGTTGCCGATGGGAGGTCCAAAAACAAGAAACAGCCTACGGTCTGCCAAACTACGACCCAAAACGAGAACCTGGAGATCAATGACAACTCTGAACCACCGGACGTACCGAAATCAGGAAGATACGTGTGTTGTGAATGCGGCAAACAATATGCAACTTCGTCAAACCTTTCACGACACAAGCAGACGCATCGGAGTATCGACTCGCAATCTGCAAAGAAGTGCATTCactgtgggaaggcctatgtcagcatgccagctcttgcgatgcatgtgctaactcacaaactgacgcacagttgcggcgtttgcgggaaaatgttttccaggccttggctgttgcagggtcacttgagaagtcacaccggcgaaaaaccatatggctgtgctcactgtggcaaagctttcgctgatcgatcaaatttacgtgcccacatgcaaacccattcgtcagacaagaactacgagtgtcccaagtgtcacaagtcgttcgccctcaaatcatatctcaacaaacaTCTTGAATCGGCCTGTCAGAGGGACAACGGTGAGGAAAGCAGCAACGATGTGGATACACCTGGTTCATACGGAGTCGTTCTATCTTCAAATAATTGCAACTCTGAGCCATGTGTCAAGCAAACGCGGCTAAACGCGATGAGAATAACCATAACCTCAACGATCAGCAACAAAGAATCGCTGTCGAAGGACGTCGGATCGTGGATTTACAACATCTTGCCGACAGTTTAA
Protein Sequence: MPRCYMVKKALCNKYMNAARGFESWGRSGRDSSPSPTAMQLLVSPIEACTALPDAQECLSSQLTDFTASETLTIPDKSTPEISEVNISPCTASCSRRTDLAECSTITGVTTCPASPPLPDRETSNRHHHYEHRESSDSMTSSSRTTYMIEVTGNGSGKPKGLSFDSSANTTMAIAASTTAAAGTTITTTVSTTTTTTTTTTTTASTTARRTMTRRYRSRTSCLSPEVVQSSKQVSIETIQHTDPQRLQGPLQSDHSTNSVDSAIVNTSSVISTDSSDQLCYTRLNDTKNQNCSSNCLDVVVPVETACQFTRCSAIQEPPIFRDRSAAETEAAHDLLELSRSLPPLPPPSIAIGPQNVIETPPTNNVQEISIYQPAQQPPIYQLNTIDLSSGTATVYQQQPSGIMYDPVSSATFVQQTSTGMFIPLSPVQEILFTYANAPNGIPSILATQPPPIEAPPLTPPASECSSDIENSNPNSQPPSLRDKEVQTITDQPEIKAGSYTYDTLLVADGRSKNKKQPTVCQTTTQNENLEINDNSEPPDVPKSGRYVCCECGKQYATSSNLSRHKQTHRSIDSQSAKKCIHCGKAYVSMPALAMHVLTHKLTHSCGVCGKMFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSSDKNYECPKCHKSFALKSYLNKHLESACQRDNGEESSNDVDTPGSYGVVLSSNNCNSEPCVKQTRLNAMRITITSTISNKESLSKDVGSWIYNILPTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01103079;
90% Identity: iTF_01101604;
80% Identity: -