Olut004731.1
Basic Information
- Insect
- Ophion luteus
- Gene Symbol
- -
- Assembly
- GCA_944452655.1
- Location
- CALYBV010000413.1:408619-410447[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-08 3.8e-05 23.9 0.1 2 31 9 38 8 38 0.95 2 2 3.2 5.2e+03 -2.2 0.0 30 41 65 76 65 80 0.59
Sequence Information
- Coding Sequence
- ATGGCTCCAGCACTGAAATACGCAGAAGACCAACTGAGAGACGCTTTGAAATCGGCAAGAGAAGGTGGCATGTCAATACGCCATGCGAGTATCAAGtacaaaATAGCGACCTCCTTGCCTACGGCGGTTTGGAAATCGAATCAATGGATCCTCAACAAAGACAGGTGGTCGAGATTTCGAATTCTACCGATCCGTTCGACCTTGGAAGCATTGATTATGCGCGGCATCTTCACATCCATGAAAGTGGCGTTAAAGAAACGGCAGCTTCCGTTCAAGGTTGCCAGCATTTTTATGACGTTGGTAAAGAAGGTGGCTACCTCCATAACCCAACCGAAGAACCCATCGTACCTACCTCAGGTGACACTGGAGAGGTTACCAATGCAGAGGCTCAGGAAGCATCAGTTCAGCGACAGAAAACTAACGCGGTGGATACGTCTATATCCTCAGTATTTAAGAGAACTTTATGCTGGCCACCAGCACTCCAGGATGCGAATTCGAACGTAA
- Protein Sequence
- MAPALKYAEDQLRDALKSAREGGMSIRHASIKYKIATSLPTAVWKSNQWILNKDRWSRFRILPIRSTLEALIMRGIFTSMKVALKKRQLPFKVASIFMTLVKKVATSITQPKNPSYLPQVTLERLPMQRLRKHQFSDRKLTRWIRLYPQYLRELYAGHQHSRMRIRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -