Olut011821.1
Basic Information
- Insect
- Ophion luteus
- Gene Symbol
- -
- Assembly
- GCA_944452655.1
- Location
- CALYBV010001158.1:308104-309790[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-15 6.3e-12 45.6 0.0 2 37 10 44 9 47 0.95 2 2 8.3 1.3e+04 -3.5 0.0 30 38 169 177 169 179 0.84
Sequence Information
- Coding Sequence
- ATGAGGCACTGTCGTTACGGTGAGAATCCCGATCAGATGGCGCGAGCTATCGACGCGGTCAAGAACGGGATGTCCCTGCGCAAGGCGGCCGCAAAGTTCTCCGTGTCGAAATCGAGTCTTCATCGTTACGTGCATCTTGGTCAGTGGGTCTTCCGGTGTCCGGGCTGTGGCACTTCGCATCGTCACAAGAAGAACCTCCTGCGACACCTGGCGGTCGAGTGTGGCAAAGATCCGGGATTCAGATGTGGCTACTGCGAGCACAAATCCAAGAGAAAGGGAAACGTTGTGGCTCACGTTAAGAGAAGACACCCGGGACTCGAGATCAAATGGATGCGAGTCACCGTGGCTCGAGGACAGCTCGAGGTTGCCAGCAGGCCAAGACTCGATGTTCGAACTATCGAATCATTGATCGTTGATGACCAAATGGATGCGCGAATGATGGGTTTTCTCAACTCCCAGAGGATGACTTATACTTGCAAGAATTGCGGCAAGATTTACAACTACTATTCGAGTCTGGCTCGACACTTGAAGCACGAGTGCGGCGTTGAGCCGAAATTCCATTGTCCACTCTGTCCTTACAGAACGAAGCATAAGTCGAGTCTGAATACCCATCTCAACGGTAGACACATGAAGATCCTCAACGAGTTTTACGTGACGCCCAATGCCAATGGAGCAGCTCCGTTGGACTCGAATGATCTCAAGTTTTTGAATCATTGA
- Protein Sequence
- MRHCRYGENPDQMARAIDAVKNGMSLRKAAAKFSVSKSSLHRYVHLGQWVFRCPGCGTSHRHKKNLLRHLAVECGKDPGFRCGYCEHKSKRKGNVVAHVKRRHPGLEIKWMRVTVARGQLEVASRPRLDVRTIESLIVDDQMDARMMGFLNSQRMTYTCKNCGKIYNYYSSLARHLKHECGVEPKFHCPLCPYRTKHKSSLNTHLNGRHMKILNEFYVTPNANGAAPLDSNDLKFLNH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01102372;
- 90% Identity
- iTF_01102372;
- 80% Identity
- iTF_01102372;