Basic Information

Gene Symbol
Hivep1
Assembly
GCA_963210295.1
Location
OY723392.1:46726269-46746616[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 8.1e-05 0.011 17.0 0.6 1 23 124 146 124 146 0.98
2 9 0.025 3.2 9.2 2.1 1 21 152 172 152 176 0.86
3 9 0.38 49 5.5 0.8 1 21 388 408 388 409 0.95
4 9 1.8e-06 0.00024 22.2 1.6 1 23 1127 1149 1127 1149 0.99
5 9 8.1e-06 0.0011 20.2 5.2 1 23 1155 1179 1155 1179 0.92
6 9 2.5e-06 0.00032 21.8 0.1 2 23 1922 1943 1921 1943 0.97
7 9 0.00098 0.13 13.6 1.8 1 23 1949 1973 1949 1973 0.92
8 9 0.0017 0.22 12.9 3.3 1 23 1994 2018 1994 2018 0.93
9 9 0.057 7.4 8.1 0.1 1 23 2198 2221 2198 2221 0.95

Sequence Information

Coding Sequence
ATGACAGACCCACAGTTGacgagcaacaacaacaacaataacaacaacaacaacacgacgacgagcaacaacaacaacaacaacgatgGCGAGCCAAAGTATCTGCACAAAAAGTTCAAGAAGATGGCTACGACGGAGGCGTCCACACCGATGGAAACCAATCAGAGAGAAACTAGCGGTACGGTCAACGAGAAAAACACCTCCGTCGTTGCCACCGGTACGCCACCTCCTTCCGAAATATCATCCCGCAAGCGCGATCACGTcacaacgacaacgacgacggcGGCGCCGTCGATCGGCAGCGAGTCTTCCAGAACGGACGTTTCGCCCGAATCCGAAGCTGCCGCGGCCGAGGCCCGCAAAACCGGATACGTTTGTCCCTATTGCAAACTCTCGTGTGCCAAACCTAGCGTCCTTCAGAAACACATCAGGGCTCATACGAACGAGAGGCCGTATCCCTGCGTACCGTGCGGCTTCGCCTTCAAGACCAAATCCAATCTCTACAAGCACTGCAGATCGAGGGCTCACGCCCTTAAGATGGAGGGCGGCGATGCCGGCAAGGTATCGGAGGATTCGGACATAAGTCTATCGGACAGCGCGAGCAACGGGACGGGTACGCCACCCCCGCCTGCGACGACCCAGCCAGCCTCGAGTAGCGTGAAAACGGTCAAGACCGGCAAGATCTACAAGCCCAAGTTCCACACGGGTCTTCAATGCGCCACCAACAACAACGAGGCGGACGTTTCGTCACCGACATCCTTGATATCCCCAGCAAGCGTAACCCTCGTGACGGCGAGCAGCGCGAAGCCAAACGCCGAACAACTGCAGGAGCACATAGACAAGATAATAACCGACAATCAAGCGATAGTGGACGCGATAGATCCGCGTCTCCACAAGCTCGTTCATCGCCAGCAGAGCTTGGTCGAGACGAGAAACAACAGCGAGCAGCCGTTGAATCTCTCCTCGATCGAGCCCGAGGCTCACGAGCAAGTCGAGTCCTCCCCCTTGTCGTCCCTATCCATTCGGAAGCGTTGCTACAGCGACAGTTTCGCCCATGAGACCCGCCACGAGCTCGCGAAAAATCCCGAGGGCTCGATCATCAAGGATCTCCTCTTGAAAACACGCGTCAGTGGTCTCCAAGCCGACGAGACGATCGACAATTTCGTTTGTCCGTGTTGCAAAGTTGCCTGCATGAGTCCCGACAATCTCGAGGCTCATCGCCGTTACTATTGCAAAAACGTCAGCCCGTTGCGCAACGACTTTCAGCTCGACCTTGAGAAACGCGAGGACTACGAGACGACAATTGCGACGAGAAATTGCGATTATTACGGCGCGACACAACCGCTTCCGTCGCCAGGTCCGTTGCTCGGTAACACGAGGCTCGTCGACGCGTACGCCCCACCATCCACGAAGAAGCAACGCTCCGAGTCCGTGCCCACGAGTCTGCGATCCCTCGAGGAGCTCTCGAAATATCCGCGGCCGAATTCCCTGCAGATGTTCGGCGGCGAGGTTCGCATACTCGACAATTCCGGTGAAACAAAGACCATGAGGATCGAGCCACGCCAGAGCGGTTCACCGCCCAGCGAGCACATCGTGCCGACGAACAACAGCGGCAAATGCGCGACGAGCGAGACTTCGTCGATAGTCGTGCGTTCGGGACTGCACTCTGGTGGCACGATGGTGCACAAGCCAAGCGGCGCTAGCGTCACGCCCGTGACCAATCCGAGCCCCGGCTCATCCGTCATATCGATCGCGAACACGTCGAAAATCCTGGCGCCCATTATTCCGAACATATCAACCCCGAGCCTCGCACCGAACATGTCCCGATACAGTTATCTCGAGCCCCATCTCAATCCGTTGACCAGCATCACTGCCTACAATCCCCTGACGCTTCCCCAAGCGGGTATCGCGAGTATACTTCACGGTGGCAAGGTCATACCGTACGTGCCCGGTATGCCCGGACCCCACACTCTCAATGGCAGCCTCGACATATCAACGTCGTTATCGTCGACAACGTCAGCCGCCCCGAGCCTCGAGAACGCGACTTACAAAATAATCCCGGGTTTGCCGGGCCTTCACGTTGTCACGCAACCCCTCGATCTGGCCAGTCCCGCGAGAGTACAAACGCCCCCTGGCATACCCGGGCCAAACTCCAACGCGGAACATCCACTCGGACAACCCCTCGATCTCGCCAGTCCCGCCAAGGAGAACAAAAACCTCGGGAACTCGCCACTTGACAGTCCCAAGCATACAGCCAGACTCGACACGCCCGACAAGTACAGAACAAGCCCGAGAAACTGCTCGATCGAGGCCACCAAGAATGAACTCGATCGCCAGACGCGCAATGTCGTTGTTCCTAGCAAGTTCAAGCGTGACCAGGATGTCGTCAGGAAGGAATTCCCGTATGAGAAGAACAAGCCTGACAACGCTCACGCTTATCCAAGTGGCAGAGAAGTGGACAATGCGCCTAATTGCCACGCGAAAAGAAAAAGACCAGCCAGTTGGAGCATCGCCGAGCTCGAGAGTCCACGCAGCTACACGGAAAGTTCGCTGACTCGTAACACGGACAACTCGACGTCGCCCATCGGCTTCGCCGAGCCCCGAGACAACGAGAGAACGCGAAACGTCCTCGATGAAGCCAAGTCGTCACTGCTCGTCGACAATTACACGAATGGCGCCAAACTTCGGATACCCGAAACAGGCCCTCGGATCATCATCGCACCAACCAGCTGCGACAACTTCAAGAGCGACTTGCCCAGCGGAATTGCAACGGAAAGCGGCCCGGTGAGAGCCGAGACGAGGAGAATCATCAGCGACGACGAGGCTACGAACGACGAGGAAACTTCCACCAAGTTTCTCAGGCCAACGTCTCTGCCTCTCAAGCCTGGGACTTTTACACCGAAACGACATCACGGCATAACACCAACGGCCAATACTCTGCCGCTCATCAGTCCGGAGACACCCAGGCCGAAGAAATCCTACGGTCAGCTGTATCTGAACGGACACGCGTACACGTATCTCGGACTGAAATGCTCCACGAGGGTGTTCTATTGCACGGTGAACAGGCCACAACCGATGTACGTGACGCAACAGCACGGCCTCTCGATGTACTCCAATTGGAAGATCTGCAAGGAAACACCGCCCGATCTTGACATGGCGCACTACGACTCGAGGCATCGACCGCCGGATTACACGGTTGCGTGGAAAAAACCCGACGACATACTGACACACTCGTCACAGAGGCCGAACACACCGACCAGCCCCGACAGCGGCTTGGAGAGCGACACACAGGAGAAAACCCGCAGAGTGAAAATATTCGATGGCGGCTTCGAGAGCAACGAGGATTACACATACGTCAGGGGAAGAGGACGTGGTCGTTACGTGTGCGAAGAATGCGGCATCCGGTGCAAGAAGCCGTCGATGCTGAAGAAACATATCAGAACTCACACGGACGTCAGGCCGTACACGTGCAAACATTGCACCTTCAGCTTCAAGACGAAGGGCAATCTGACGAAGCACATGAAGTCGAAGGCGCACTACAAGAAGTGCGTGGAGTTGGGTGTTGTGCCGGTGCCAACGTCGGTATGCGACGAGAACATTGACAAGGAGGCGATAGCGCGTCTGGTTGCCGGTGGTGGAAACGCCGAGGACACTTCggacgacgacgaggaggatAGCGAGGGTGACGAGAGCGACGAGTCCGGTAGCGAGGAACAAGAAGCTGCTCAGAGTCTATTGAGCTTGTCGCAAAGAAGTTCAAACAGATTGCCAGGCTTATTGCCAACCGGTAGACCGACTACTTATCCGTACGCGCTCACTTTGCCAACCGCTACGTGCGCCACGCAAAGCCTCGTGTCGACTTTGTGCGCGACGAGTGTCAGCGTAGTCGCCTCCACGACAAGCTCCAGCACGATGATACCCAGCGAGACGTCGAATCGTTATTATTTCCCGTCGACGCGCGACACGCCCGCGCTCGTTGCGGACGAACGTAGAGACAGCGTGATACGTACGTCAAGAAGATCGGAAGACGACTCGGACGTTGAGATCGAGGAAACGATGGAAACGACGAGGCATCATCAGAGCGTCCAACAGCCGATGGACCTGACGACCAGGCAGACCTCgtcctcctcgtcctcgtcaacgtcgtcgtcgttgtcgtcaccCGGTGCCCACAGGCCAAGAGCAACGGACATCCTCACACCGGTCGCCGAGCCCGTTCTCATGCAGACCATCGTACAAAGCATGGAACGACTACCGCTCCAAGGCACCAGCAGCAGCAAGGAATGGAAACCCGAGGCGGATGGCCATATGCTCCAGGCCTATCTCACCGAGAGACACGTGATGGACAGCAAGATGAAGCAGCAATATCGCGTTGGCACCCTCACCCCAATCACCACCGTCACCACCACCACCTCGACCTCGAGCAACGCCAACAACAAATCCGACAAACACCCCGATCGCGAGATCTACACGAGACAAATGGAATTCATGAACTCGCGGAACACCGAGTCGAGCAGCACACCAACCGTCACCTACACCAATCCCAGCAGACTCCACCAGAGCTATCTCGAGATGAGAATCAAGTCGAAGCAGCATCAAACGAGCGCCGAGGAGCCCAAACTCGAGATGAGAGAGACGATCTGCCAGAACGACAAGAGCGCTGCCCAAGAGCGACGTAACTACGAGACGAAAATCCTCCAGGCCGACAATGACAACTGTCGCTCGTCCTATCCCGTCGAGAACGAGGCGATGAGGCTCTTCAATTGCACGACTAACAGAACCAACGAGCATCGCAACGTCGCCAAGAATTGCGCCGATCGGACGAGCTTCAATCACGAAACTGGACGCGACGTTTGCTCGGATCGCCCGCCAACGAGCTTCGTCGAGGCGAATCCACGTATCTCGGCTCAGTGCAACGCCAGAAACGAGGCCCACGAGCCACGCTCGATATTCAACGCGGTCAAGACGATGAGCGAAGTCGAGAGAAGCGCCACGAGCAATCAGGATTATCGCGTCGCGAGTCATCAGGAGGCGAGAATAGCATCGAGTCCGCGTTTACACGAGAACGGCACGAGCAACTCACGACCGCCGAGCCGCGAAACGAGAACGCCCTGCCAGGAGTATCGGGGAGCGAATCAAACGGGACAAATGTCCTTTCACGAGGCTCGCTCGTCTAGTCAAGAGTTCAAATTGCCCTCGCAAGAGCTGAGGCCACCAAGTCGTGAATTCAAATCACCGTGCCAGGCGGAGGTACGCTCGTCGTCCGGCCAGGATCCTCTCGTTACTCCAGCCTCGCCGAGCACCAATAACGTCTCCGTCGTTGTTGTGCTCGATCATCAACGTCGTCCGAGCGTCAACGACGTCAGATCGCCGTCCGGACGTGACAACGTGCGCGTAATCAACGAACAACGGGCACAGGAAGTCTCCAGGCAGAGCTTCGAGGCAGCTGCCGCAGCGGCAACGATGTCCATTCATCACGATGCCAATAACAAGATCCACGAGATCCAGGCCAGACTGGCCAGATCGCCCGTCGACACGAGGGCCGATATCGTCGCCGCTGACGCGAAACGCCACGAGATCGAGAGAACGAAACAGAGCATCAACGAGAGCGTCAAACATACGGTGgcgagaaaaatggtcgtgggAGGACCGGGATTCAGATCGCCGTCGCCACCCGGGACGCTCAAACCTCAGGCCGAATTTCTGCAACCCTCCAGTGGACCGGCGCCTAATTACGTCAGCGTCACCGAGGACGGTCGAAGTGTCTGTGGCATTTGCAACAAGGTGTTCAGCAAGCCAAGCCAGCTCAGATTGCACATCAATATTCACTACTTCGAGAGGCCCTTCCGTTGCGAGAGCTGCGCCGTGTCCTTTCGAACGAAGGGACACTTGACGAAACACGAGAGATCCGTCTCACATCACAACAAGGTCAGCATGACGTCGACCTTCGGGGCCGCGACTACGAGCAACCCCAGGCCCTTCAAGTGCACCGATTGCAAAATCGCCTTTCGAATACACGGCCATCTCGCGAAACATCTGCGCAGCAAGATGCACATCATGAAGCTCGAGTGCCTGGGAAAACTTCCGTTCGGGACTTACGCCGAGATGGAACGGTCCGGCGTTAATCTCAATGATATCGACACCACCGACTGTGATAATAGTTTAACTAGTCTGCAGATATTGGCTCAAAAGCTTTACGAGAAGGATCCGAGCAAGATGGGACAGTGGGACGCGGAGATGATGATACCTCATCAGGGTGCGAGCGGCGGTGAAACGTCCTCGGACGAGGGCGAACCCATACCGCCCCCACATCATCATCAGTATCATCCGGGACtgccgcagcagcagcagcagcagcagcagcagcaaatGAATCACGAGATTGAACATTCGCGGGCGTATCATCACACCGCGCAACAGCAGCCCGCACTCTTGTTGGCCGACGAGGCGAGCAAAGTGGCGACCAACGCGTCGCGTTTCGTTGCTCAGCAGCGCGTCGACTATGCGAGCAGAGCAAGCGCGCCCTTGTGCTGCGACAATCACGAGAATTCACGCGGTCCTCACGAATTGGATCATCAGCATCAATTGCCCTACAAGTGCCAAATTTGCGCGATATCCGTGAGAACCGTCAACGAGCTTCAGGTACATCGTTTCGTCGAGCACAACAACTTGGACTCCACGGGCAATCCAATCATCACCGTAGCTTCGCAACTGAACGATCATCCTCGCGACAGGGACATGAATCAGAAGCTTCTACTCGTGCAGCAACGCTCGAACGACGAGACCGGAAGTCTCGCCAGGGACGATCCTGGTAATCGCAAAATCGATGACTCATAG
Protein Sequence
MTDPQLTSNNNNNNNNNNTTTSNNNNNNDGEPKYLHKKFKKMATTEASTPMETNQRETSGTVNEKNTSVVATGTPPPSEISSRKRDHVTTTTTTAAPSIGSESSRTDVSPESEAAAAEARKTGYVCPYCKLSCAKPSVLQKHIRAHTNERPYPCVPCGFAFKTKSNLYKHCRSRAHALKMEGGDAGKVSEDSDISLSDSASNGTGTPPPPATTQPASSSVKTVKTGKIYKPKFHTGLQCATNNNEADVSSPTSLISPASVTLVTASSAKPNAEQLQEHIDKIITDNQAIVDAIDPRLHKLVHRQQSLVETRNNSEQPLNLSSIEPEAHEQVESSPLSSLSIRKRCYSDSFAHETRHELAKNPEGSIIKDLLLKTRVSGLQADETIDNFVCPCCKVACMSPDNLEAHRRYYCKNVSPLRNDFQLDLEKREDYETTIATRNCDYYGATQPLPSPGPLLGNTRLVDAYAPPSTKKQRSESVPTSLRSLEELSKYPRPNSLQMFGGEVRILDNSGETKTMRIEPRQSGSPPSEHIVPTNNSGKCATSETSSIVVRSGLHSGGTMVHKPSGASVTPVTNPSPGSSVISIANTSKILAPIIPNISTPSLAPNMSRYSYLEPHLNPLTSITAYNPLTLPQAGIASILHGGKVIPYVPGMPGPHTLNGSLDISTSLSSTTSAAPSLENATYKIIPGLPGLHVVTQPLDLASPARVQTPPGIPGPNSNAEHPLGQPLDLASPAKENKNLGNSPLDSPKHTARLDTPDKYRTSPRNCSIEATKNELDRQTRNVVVPSKFKRDQDVVRKEFPYEKNKPDNAHAYPSGREVDNAPNCHAKRKRPASWSIAELESPRSYTESSLTRNTDNSTSPIGFAEPRDNERTRNVLDEAKSSLLVDNYTNGAKLRIPETGPRIIIAPTSCDNFKSDLPSGIATESGPVRAETRRIISDDEATNDEETSTKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPKKSYGQLYLNGHAYTYLGLKCSTRVFYCTVNRPQPMYVTQQHGLSMYSNWKICKETPPDLDMAHYDSRHRPPDYTVAWKKPDDILTHSSQRPNTPTSPDSGLESDTQEKTRRVKIFDGGFESNEDYTYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCTFSFKTKGNLTKHMKSKAHYKKCVELGVVPVPTSVCDENIDKEAIARLVAGGGNAEDTSDDDEEDSEGDESDESGSEEQEAAQSLLSLSQRSSNRLPGLLPTGRPTTYPYALTLPTATCATQSLVSTLCATSVSVVASTTSSSTMIPSETSNRYYFPSTRDTPALVADERRDSVIRTSRRSEDDSDVEIEETMETTRHHQSVQQPMDLTTRQTSSSSSSSTSSSLSSPGAHRPRATDILTPVAEPVLMQTIVQSMERLPLQGTSSSKEWKPEADGHMLQAYLTERHVMDSKMKQQYRVGTLTPITTVTTTTSTSSNANNKSDKHPDREIYTRQMEFMNSRNTESSSTPTVTYTNPSRLHQSYLEMRIKSKQHQTSAEEPKLEMRETICQNDKSAAQERRNYETKILQADNDNCRSSYPVENEAMRLFNCTTNRTNEHRNVAKNCADRTSFNHETGRDVCSDRPPTSFVEANPRISAQCNARNEAHEPRSIFNAVKTMSEVERSATSNQDYRVASHQEARIASSPRLHENGTSNSRPPSRETRTPCQEYRGANQTGQMSFHEARSSSQEFKLPSQELRPPSREFKSPCQAEVRSSSGQDPLVTPASPSTNNVSVVVVLDHQRRPSVNDVRSPSGRDNVRVINEQRAQEVSRQSFEAAAAAATMSIHHDANNKIHEIQARLARSPVDTRADIVAADAKRHEIERTKQSINESVKHTVARKMVVGGPGFRSPSPPGTLKPQAEFLQPSSGPAPNYVSVTEDGRSVCGICNKVFSKPSQLRLHINIHYFERPFRCESCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATTSNPRPFKCTDCKIAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGVNLNDIDTTDCDNSLTSLQILAQKLYEKDPSKMGQWDAEMMIPHQGASGGETSSDEGEPIPPPHHHQYHPGLPQQQQQQQQQQMNHEIEHSRAYHHTAQQQPALLLADEASKVATNASRFVAQQRVDYASRASAPLCCDNHENSRGPHELDHQHQLPYKCQICAISVRTVNELQVHRFVEHNNLDSTGNPIITVASQLNDHPRDRDMNQKLLLVQQRSNDETGSLARDDPGNRKIDDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01100839;
90% Identity
-
80% Identity
-