Basic Information

Insect: Ophion ellenae
Gene Symbol: -
Assembly: GCA_963210295.1
Location: OY723389.1:28160406-28170453[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00021 0.027 15.7 2.0 2 23 498 520 497 520 0.94

2 7 3.4e-06 0.00045 21.4 0.8 1 23 531 553 531 553 0.98

3 7 1.2e-05 0.0016 19.6 0.4 3 23 561 581 559 581 0.96

4 7 0.091 12 7.4 0.2 3 23 590 610 588 610 0.92

5 7 0.0019 0.25 12.7 3.2 1 23 618 640 618 640 0.97

6 7 2.1e-07 2.7e-05 25.2 0.3 1 23 646 668 646 668 0.97

7 7 6e-05 0.0078 17.5 0.2 3 23 681 702 679 702 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00021	0.027	15.7	2.0	2	23	498	520	497	520	0.94
2	7	3.4e-06	0.00045	21.4	0.8	1	23	531	553	531	553	0.98
3	7	1.2e-05	0.0016	19.6	0.4	3	23	561	581	559	581	0.96
4	7	0.091	12	7.4	0.2	3	23	590	610	588	610	0.92
5	7	0.0019	0.25	12.7	3.2	1	23	618	640	618	640	0.97
6	7	2.1e-07	2.7e-05	25.2	0.3	1	23	646	668	646	668	0.97
7	7	6e-05	0.0078	17.5	0.2	3	23	681	702	679	702	0.95

Sequence Information

Coding Sequence: ATGGAGAATTTGGGGACGGAAGTAGCCCAGGTGGCGTCGGCTGTAACCAAACACGGAATGTCCGTAAAGGAGGAGATAGTTTACGCGTCGGACGTGCTGGAGGAGGAGGGTGACGAAGTTGAGGAAATAGTGGAGATAATCGAGGAGATAGAGGAGATCGAGGAGACGTTCGAAGAGGAAGTCGAGGAGGCGGATAACGAGGACGGTACGGGGGACGAATGCCAGAGCGCGCCCGATCTGGGCGAACATCGAGAAACGAGCACAGACTTCTACGCGTCGGGTAGTCAAGGCGAGGAGGACAGTCAGGCTGTCGCGACGCACGACCATTTTAATTACGAAGAAGTCCGATTGTCCACGTATCATCAGGAGTATCCGAGCAACGAGACCAACGGACGAGCCACTTCGGTAACTTACGACGTCGACGAGGACTGGGAGGACGAGGATAACGAGCATCAAGTCGCGGAGCTGCGCAGCGTCAACAACGGCACGTCCGGAAGGAACGACAGCCTCTTCGTTTCGGCGGTGCAGAAAGTACACTCGATAAACGGCAAGAGGCCAGCCAGCTCGAGGGATGTTCAATACTCTTCTTCGGGTGAAACGAACGCCGAGCCCGTTTACAAAGTTGCAAAGACCCGAGGGTCCACGGACTACATAGATGCTCGGAACATCAGGAATTCCTTGGAAACTGATGAGAACGAAGGCGACGAGGAGGGCGTGGCGGAGGCtgaggaagaggaggaggaggaggaggagcaaCAACACGAGATCgtgaaaaattccgaaaatgacTTGATATACACTGTACTTGGGTCGAAGAAATCGACCAACGCTAAAACGAACAGGGATAACGCGTCCAATCACAATCAGGAATCCTCTCGTCATCTAAAAATGGAGCGCCCCGACGACGACCCGATTCCTATCGAGGGAACGATATATTACGAGGGTGATAACATGGAAACTGTTTACGTGGCGCAGTCAGCTGAAGAGGACGATGTTCAGTATCACGACTACGCGGAACAAGCAATAGAGCACGACGAGCAAGAATGGGACGGGACGAATGAGGGCACCAACGAGAATCAGGAGGAAGGGGCAGAGGCCGGGGCGGAGGAAGAGGCTGTGCAGGACCAAATATTCCTGCACGAGGACGAGGACGGCCAGTTGTATTTCAAGGACGAAAGTGGCACGCTTCGACCGGTTTATCTCACTGCCGACGGGAATTATGCGATTGCTGACAACACCACCGACGAGCAGGAGATGCCGGAAAGCACAAATAATCACGAAGAAAGTACGGCACCGACGACATCGGCCGACGATGGCAAAGCCTTCGACGACGATAATTTCATCGTTCCGGAGATGGATAGTGCTGCCTCGAGTTCGAACCCGAATCATCCCGAAAACGAGGACAATACCGTGACAATTTCGCTCATCATATCCGAGGACGAAAATGGCCAGAAGAGAACACAGGTCATAATACCGACCACGGACAGTCTCAAGTGCGAGCTGTGCGCCAAAAGCTTCAAGACGTCGTTCCAATTGCTGAGGCACAACCGACTAAAGCACGCAAGAGAGGAGGACATAACGACCCGAAATTTCCCCTGCGATCTTTGTCCGAAAAGATACACCGATCAAAATACATTGGCGCGTCATCGCAAAACTCACATCGGCGATCGTCCATTCGGGTGCCTCGAGTGCGGCAAGAGTTTTCCCACGTCCACGGCGTTGCGTCGCCATCTTACCCAGCACAATCCACAGTCGCGTCCGTTGCCTTGCATCTACTGCGGTCGCCGATTTTTGGAAAAGGCCGCCCTGACGAAACACGAGCAATCCCATCTGGCGGGCGATCAACGAACCCACACATGCGACATATGTCACAAGTCCTTCCTGCAAGCGGCCGATCTGAATCTCCACAAGAAGAATCACGATCCGGACAAGAAATTCGACTGCGAGGTGTGTGGTCGGGAATTTAATCGGTTGAACAATTTGCAGCGTCACATGATGGTGCATAAGCAAAAACAAGATGGAAACCAAGAGATACTGGCGTGTGACGTGTGCGGCATAACGTACAAATTCATGAGCTCGTTGACGCGGCACATGGTGACGTCGCACATGAATCCGGAAAAATTGCGCCAACAGGCGGACGAGCAGCGCAAAAAGCGCGAAAACAATTACCGCCGTTACCTGGAGAATCGAAAAATGTACGAGACCCAGCACACGGGGACGGAATACAGTGCTAGTGTCGGTAGTGGTGGCGGTGGCGGTAGACGTTCGAGTGGTTACCGATCGAATAACGAAAACGACGAAGATACAGCCTGA
Protein Sequence: MENLGTEVAQVASAVTKHGMSVKEEIVYASDVLEEEGDEVEEIVEIIEEIEEIEETFEEEVEEADNEDGTGDECQSAPDLGEHRETSTDFYASGSQGEEDSQAVATHDHFNYEEVRLSTYHQEYPSNETNGRATSVTYDVDEDWEDEDNEHQVAELRSVNNGTSGRNDSLFVSAVQKVHSINGKRPASSRDVQYSSSGETNAEPVYKVAKTRGSTDYIDARNIRNSLETDENEGDEEGVAEAEEEEEEEEEQQHEIVKNSENDLIYTVLGSKKSTNAKTNRDNASNHNQESSRHLKMERPDDDPIPIEGTIYYEGDNMETVYVAQSAEEDDVQYHDYAEQAIEHDEQEWDGTNEGTNENQEEGAEAGAEEEAVQDQIFLHEDEDGQLYFKDESGTLRPVYLTADGNYAIADNTTDEQEMPESTNNHEESTAPTTSADDGKAFDDDNFIVPEMDSAASSSNPNHPENEDNTVTISLIISEDENGQKRTQVIIPTTDSLKCELCAKSFKTSFQLLRHNRLKHAREEDITTRNFPCDLCPKRYTDQNTLARHRKTHIGDRPFGCLECGKSFPTSTALRRHLTQHNPQSRPLPCIYCGRRFLEKAALTKHEQSHLAGDQRTHTCDICHKSFLQAADLNLHKKNHDPDKKFDCEVCGREFNRLNNLQRHMMVHKQKQDGNQEILACDVCGITYKFMSSLTRHMVTSHMNPEKLRQQADEQRKKRENNYRRYLENRKMYETQHTGTEYSASVGSGGGGGRRSSGYRSNNENDEDTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01100841;
90% Identity: iTF_01100841;
80% Identity: -