Oell000394.1
Basic Information
- Insect
- Ophion ellenae
- Gene Symbol
- ZFX
- Assembly
- GCA_963210295.1
- Location
- OY723385.1:6247591-6261693[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.4 1.8e+02 3.7 0.1 3 23 16 36 15 36 0.94 2 14 0.004 0.51 11.7 0.7 1 23 1025 1048 1025 1048 0.97 3 14 0.0036 0.47 11.8 0.1 2 23 1061 1082 1060 1082 0.97 4 14 2.8e-05 0.0037 18.5 1.4 2 23 1085 1106 1084 1106 0.97 5 14 0.014 1.8 10.0 0.3 1 23 1112 1134 1112 1134 0.95 6 14 2.8e-05 0.0036 18.5 4.5 2 23 1141 1162 1140 1163 0.95 7 14 0.12 16 7.0 3.7 5 23 1176 1194 1175 1194 0.97 8 14 2.5e-05 0.0033 18.6 1.5 3 23 1201 1222 1200 1222 0.97 9 14 0.014 1.8 10.0 0.5 2 23 1238 1258 1237 1258 0.97 10 14 7.6e-05 0.0099 17.1 0.7 1 20 1264 1283 1264 1286 0.92 11 14 9.5e-05 0.012 16.8 2.7 1 23 1294 1316 1294 1316 0.99 12 14 0.0026 0.34 12.3 3.2 1 23 1322 1344 1322 1344 0.97 13 14 2.8e-06 0.00037 21.6 3.9 1 23 1350 1372 1350 1372 0.99 14 14 0.00034 0.045 15.1 7.2 1 23 1378 1400 1378 1401 0.96
Sequence Information
- Coding Sequence
- ATGGAGATCGGCAACGTCGGAGCGTCGGCGGGCGGCGCGGTGGCCTGTCCCGTTTGTACGCTTTACCTGCGCGAGGGTATAAGCCTCCAGAGGCACTTGGACACGCATCCCAAGGAGCAGGTCATCGAGGCTCTCATAAAGGCCAGTTCTTCGCCGGCGCCGACTCCGCCGCCCAGTCAGCCTAACGTAGCGGCGCAGAATGGCATGCAGCAGCAATTGAACGCCAATCCTTCGTTACCCCCTCAATCGCCGTATCCAGTCTTCGAATGTCCGCCTATAAACACGATGATGCCGCCTCAATTCGCCTCGTTCAGTTATCAACAGTTCGTGAACAACGGCACGATGATGATACCGCAGTACGCGATGGCGCCGCAGGCCAATCAGATGATGCAGATGCTGTACAATCCTTACGGCATGTATCAGCAACAACAGATACCCACCGTGCAGATGATATCGCCCATCGCGGCCATACCCGCGACTCGCATGAGGCCCGTCGTGTCCGTGCCGAACGACGCAAATGGCCGAGGCTCCATGGAACATCTCGGCGGACAAGAGGCCAAACAGGTGGGCACCGATCTCATATCGGAGGCCGACGACGCGGAGAGAATCCTGCCGGACATCGAAACTATGCCGAGGACGCAGACACCGGCGAGCGCGCCGACCGCGCACGAGGCGCCGAGTAGCGCTTGCGACGAACAGCGGGAAGACTCGGCGGGCCTGGGACACGGAGAAACGCAGAGCCGCGACACCGCGAGCCAACCGACGGCGAGCGAAACGTCGGAGCGTCGCGACTACGAGCGGGTCGCCCCGCCTGACGTCACCTGCGAGACTAACACGGAGGAGAAAGAGAACTCGGCGATGGTCGACGAGACTCTCAGGAGGGAGGAAGACGCGAGGGGGACGAACGAGACGCGAGGCGAGAGCAAACTTGGGAAATTCGTCGCTGACGAGACACGGCCTTTCGATCAAGCATACGAAGATGAGGTCGGTGAGAAGAGCAACGGCGAGAACGACGCGGAGAATGGCCACGAAGAGGAGACGGGCAAGATCGAGCGGAGAGAAATAACGACGCCGGCGACCAAGGACGAGATGGGCGAGTCCGGTGTCGTCGAGACGCGGCAATGCCACGAGGACAACGCGGCGAAGGAGACGAGCCAACCGGAAGTCGAACAACTGGAGAGACTGCTCATAACGATAATGGAGTCGAATTTCGATACAACGACCATGAGGCTCAAGAGCGACGAGAACGCAACGAGAACGACGATGAAGAACGAAACTGACACAGAGGCGACGAGCAACGAGCGAGAAGCCACGGAATCATGGTCCGACGAGAAGAGGGAAGACGAGGAGTGTAAAAATTACGACGAAGGGCAGAATGAAGTTTACACGAAGAACGACGAGATGGGCCAAATCGAGCAGTGCCTGGACGAATTGGAGAATAATTTCGATATGCCTTATCGTTACAGATGCAGCTTGTCGGCTCCCTCGTCGCCGCTAGTCGCGAAAAAATTGCGCAGAACTTGCTCGCTCTATTGCGATTATCGTTCTAACgagaatttgattttttgcaacGTTGACTTCGAGGCGATGCCGGCCAGCGAGGAGGAGGCCAAGAGCATGGAGGACAACTTCGACGAGGAGGACATGGAAATCGAGGAAGAGATAGCGAGCCCGCGTACGCCATTCGTCAAACATAACGATCCGCTGGAGTCGAGCAGGTCGAGGACACCCGCGATTAGCGGCGTATCCGGTTTGCCCGAGCACACGGAAGTCAAGGAAGCCGCCAACGAAATAGCCGCGAGAACGTTCTGTCCAATGGACATCGCGAGCTCGAGCGGCGAAGAGGAGGACGAGGAagacgaggacgaggacgaggaaGACGAGGATGACGAAGAGGACGAGGAGGAAGACGAGGAGAACGAATCCGTTGGCTCGTCGTTGACGAAAAATGGCCATGAACGGTCACTCGACGTTCAGGACGCCAAGGCCGAACTTCAGGAACATCCGATGGCCAGTGACGAGCGTAAAATCGACTCGGGTCAACAgatttatcatcatcatcatcatcagtcGGTCATAACGGAACACGTGAGCTCTTTCACGACGATTAATTCACAACAGCCTCTCATTGTACACGAGGGCTACTCGATGGCCAGTCAAAAGTCCATGCTGCACGAGAATATAATGAATCTCACGGAATTGGCCGATCCAACGACGAGCACCGAGTCAAAGAGCTCCCAAGCGGCGACGAAAACGACACTGTTGAATCATGCCCAATCCACCGAACTTCTCAATATCAACGAGAACGCCCACGCCGGACCGATGAACGTTTTCGAATTCGACGGACTTCAGATATTAGTTCCTAGTACATTCATAAGTGAATCGTCGCAGAAGGCGATCAGCGCGACCAGCCAACAGTCGATGGCGAGCAGCGAAGGGGGCGCGGGCATCGACGAGGAAGTCAAGAGCGTCAATATGCGCGCGGACGAGACCATGCCACCGCGGGGCGAATTGTCGGAGCAAGAGAGCAACGGATGCACCGAACACTCCGCGTGGCAGCTGTACATGGGCCAGGAGTCATCGCGCATGTCGACCTCGTACGACCTGATGGCACGGGAGAGTTGGGAAGAGTCCGAGGGTTCGGACAACGAGGTCGGTGTGCCGCTGTTGGACAGCAGATCCCTAGCGACGCACTTCACCTCGAGTTTGTTCTTGGACCGAGATCGAAAGACCCCAACGAGGCGAACCTTCAAGTGTTCCCAGTGTGCGGAGGTGTTCGACTGCCCGAAGGAGCGTCGTGTGCACAGTACAACGGTGCACAAAGAGGCAGGTCCAAGTGGCAGCAACGATCCAACCGATCGCGCGGAAACGAAGGACATCAAATTATTGGACGGTCGAACGAACGTTTTCGACGACATATTCGTATCCGGTATTCACACGCAACAATCCCTTTACCATCATCAGCAGCCGCAGCAGCCGCCATTGTTGCATCAACTGCAGCCTCCCCAGCAGCTGGACATCGCGAAAGTCGAGGTAGACCAGAAGAGCGATGCGTTGCCGCAGATCCTCGAGTTCTCCTGCGCAATGTGCAGTCAGCGTTTCGCGAGCGAGAGATCTCTACAGTTGCACAATCGTCGCGTACACGGCACCGAGGTAGCCCGTCGTCTCCAAGAAATATCAAAGTGCCAGATCTGCAACGAGGAGTTCCCCTCGGTAATGCTCTTCAACGCTCATCTGAAGATCCATCCGCTCGAGTGCGCTCAGTGCGGCAAATACTTCTACCGAAAGCCAAATTTCAAGCTTCACATGAAGCGACACCTGGGCATCAAGCCCTTTCCCTGCACGGTATGCGACAAGGCCTTCCTAACGAAGCAAAAACTCGACGAGCACACGAACGGCCACACCGGCAATGCACCCGTCAAGTGTAACCTGTGCAACGAGACCTTTCGACGCTACTCGAACTTGACCCAACACAAGAATCGTCATCATCTCAACATAAAGCGCAAACTCAAGGATTACATATGCCATTGCGGCGAGGTGTTTCACACGAAGAAGAAACTAGCCTGGCACAAGGAGACGCACGACGAGAAGCCGAAAGCTTGCACCTACTGCAACGAGAGATTCATACACATGGCGAGCCTCACGCGACACATGAGGCGGGCCCACAATCGTCGCTTCGTGCCCGATGCTCAACGCGAGAGCGAAAACGTCGAGTGCCCGATATGCAAGTGTATATATCTACGCTCGTCCTTGTCCGTACACATGAGGGTGCACAACGGCGAGAGACCGTACGAGTGTCAGGTGTGCTCCAAAGCGTTCAGTACCAAGTGGAATCTGCAATTGCACAAGTGGACACACGCCGCTCGTAGCACCAAACCATTCAAGTGCAATCAGTGCAGTGCCGCATTTTATCGACACAGCGATTACACCGCTCACATGAATTCACATCGTAACGTAAGGCCGTACACGTGCAATTATTGCGGCGCCCAATTCATAAGAAAGTACAATTGTCTGAGACACGTGAAGGAACACGAGGAGAACAAGGCGTACACGTGTGACATTTGCAACAAGACCTTTCATCGCTCGTATTACCTTAAGGATCATCTGCGCGTACACTCGGGCGCCAGACCGTACACGTGTCACATATGCGGCAAATCCAGTAGCACCAAATCCAATCACAACAAACACGTTAGAATTCATCATGCCCGGGAGCCTGTTAATACGGAGAATTAA
- Protein Sequence
- MEIGNVGASAGGAVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASSSPAPTPPPSQPNVAAQNGMQQQLNANPSLPPQSPYPVFECPPINTMMPPQFASFSYQQFVNNGTMMIPQYAMAPQANQMMQMLYNPYGMYQQQQIPTVQMISPIAAIPATRMRPVVSVPNDANGRGSMEHLGGQEAKQVGTDLISEADDAERILPDIETMPRTQTPASAPTAHEAPSSACDEQREDSAGLGHGETQSRDTASQPTASETSERRDYERVAPPDVTCETNTEEKENSAMVDETLRREEDARGTNETRGESKLGKFVADETRPFDQAYEDEVGEKSNGENDAENGHEEETGKIERREITTPATKDEMGESGVVETRQCHEDNAAKETSQPEVEQLERLLITIMESNFDTTTMRLKSDENATRTTMKNETDTEATSNEREATESWSDEKREDEECKNYDEGQNEVYTKNDEMGQIEQCLDELENNFDMPYRYRCSLSAPSSPLVAKKLRRTCSLYCDYRSNENLIFCNVDFEAMPASEEEAKSMEDNFDEEDMEIEEEIASPRTPFVKHNDPLESSRSRTPAISGVSGLPEHTEVKEAANEIAARTFCPMDIASSSGEEEDEEDEDEDEEDEDDEEDEEEDEENESVGSSLTKNGHERSLDVQDAKAELQEHPMASDERKIDSGQQIYHHHHHQSVITEHVSSFTTINSQQPLIVHEGYSMASQKSMLHENIMNLTELADPTTSTESKSSQAATKTTLLNHAQSTELLNINENAHAGPMNVFEFDGLQILVPSTFISESSQKAISATSQQSMASSEGGAGIDEEVKSVNMRADETMPPRGELSEQESNGCTEHSAWQLYMGQESSRMSTSYDLMARESWEESEGSDNEVGVPLLDSRSLATHFTSSLFLDRDRKTPTRRTFKCSQCAEVFDCPKERRVHSTTVHKEAGPSGSNDPTDRAETKDIKLLDGRTNVFDDIFVSGIHTQQSLYHHQQPQQPPLLHQLQPPQQLDIAKVEVDQKSDALPQILEFSCAMCSQRFASERSLQLHNRRVHGTEVARRLQEISKCQICNEEFPSVMLFNAHLKIHPLECAQCGKYFYRKPNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKRKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLSVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDICNKTFHRSYYLKDHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01102260;
- 90% Identity
- iTF_01102260;
- 80% Identity
- -