Basic Information

Insect: Ophion ellenae
Gene Symbol: su(Hw)
Assembly: GCA_963210295.1
Location: OY723390.1:910442-916367[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.003 0.38 12.1 0.1 1 21 18 38 18 39 0.95

2 13 1.3e-05 0.0016 19.6 1.7 1 23 113 136 113 136 0.96

3 13 8.3e-05 0.011 17.0 4.2 2 23 143 165 142 165 0.95

4 13 0.00052 0.068 14.5 2.6 1 20 171 190 171 192 0.95

5 13 4.1e-09 5.3e-07 30.6 2.4 1 23 203 225 203 225 0.99

6 13 1.5e-05 0.0019 19.4 0.8 2 23 235 256 234 256 0.97

7 13 0.0067 0.87 11.0 0.3 2 23 263 284 262 284 0.97

8 13 7.7e-06 0.00099 20.3 4.7 1 23 290 312 290 312 0.99

9 13 1e-05 0.0014 19.8 3.9 1 23 318 340 318 340 0.95

10 13 6.3e-06 0.00082 20.5 0.7 1 23 346 369 346 369 0.95

11 13 1e-07 1.3e-05 26.2 1.4 1 23 375 397 375 397 0.98

12 13 1.9e-07 2.5e-05 25.3 2.4 1 23 403 425 403 425 0.98

13 13 2.7e-06 0.00035 21.7 1.4 2 23 432 454 431 454 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.003	0.38	12.1	0.1	1	21	18	38	18	39	0.95
2	13	1.3e-05	0.0016	19.6	1.7	1	23	113	136	113	136	0.96
3	13	8.3e-05	0.011	17.0	4.2	2	23	143	165	142	165	0.95
4	13	0.00052	0.068	14.5	2.6	1	20	171	190	171	192	0.95
5	13	4.1e-09	5.3e-07	30.6	2.4	1	23	203	225	203	225	0.99
6	13	1.5e-05	0.0019	19.4	0.8	2	23	235	256	234	256	0.97
7	13	0.0067	0.87	11.0	0.3	2	23	263	284	262	284	0.97
8	13	7.7e-06	0.00099	20.3	4.7	1	23	290	312	290	312	0.99
9	13	1e-05	0.0014	19.8	3.9	1	23	318	340	318	340	0.95
10	13	6.3e-06	0.00082	20.5	0.7	1	23	346	369	346	369	0.95
11	13	1e-07	1.3e-05	26.2	1.4	1	23	375	397	375	397	0.98
12	13	1.9e-07	2.5e-05	25.3	2.4	1	23	403	425	403	425	0.98
13	13	2.7e-06	0.00035	21.7	1.4	2	23	432	454	431	454	0.95

Sequence Information

Coding Sequence: ATGACCAGTACCATAGAAAATACGACCGACAGGATTTTGGTGACCACCAATTATCAGTGCGTAACCTGTCagcgaatttttcaaaatgaaagcCTACTGAGCGATCACCTGAACGTCTGCAGGGAGGAAGACGACAGCGCGGACATACTGGAGCTCAAGACCTTCCGCGATTACGACTCGGAAAGCTCCGAAGAATTCGACGATTCGGACACCGGTAATCAGAATGCGGGGGATCGCGACACAGAGACGACGGCCGCCGGTACGATACAACCGGTCGGCGAGAACGAGTGCCACTGCTGCGGCGAGGATCTCAAGATTGCTCACGCCGGTGGCGAATACAAGTGCGCAAATTGCGAGCTCTCGTTCAGAAAACGCTCCCACCTGGAGAGACACACGATCGTCGTGCACTGGGAGATCGAGTCTTGCTCGTGCACCGAGTGCGGCACGAGCTTTCGCGACAAAAAGTCCCTCGACAAGCATCGATACACGAGCCATTCCAACGCCAAGATTTACAAGTGCGAACCTTGCGACCGATATTTCACGCGTCGTTACCACCTGAATCGCCACAAATTGCAGTCCGGTTGCCATGGGACTCTGCGCAATTATTACCAATGCCAAGTGTGCAACAAGTCGTTCACGCGCAAGGACAATCTACGCGAGCACCTGAGAACCCACGCGGGTGTTCCCCAAAGGCAGCAAAAGTCTTGCGACCAGTGCGACAAGAAGTTCAGCACGCCGCAACAGCTGCTGATACACAGTCGCGTGCACAGCGGCGAGCGACCGGTCAAGTGCGATCTTTGCCCCAAGACTTTCCTATCGGCGCTCGCGGTGAAGAAACATCGGCGGGTTCACACCGGTGAAAAACCCTTTCAGTGCAAACACTGTCAGCGAAAGTTCGCCGCCCGAGAAACACTGAATCGTCATCAGAGGACGCACACGGGTGAGCGACCTCACGTATGCCAGCACTGCGGCAAATCCTTCATCCAGGCTGCCCAGCTGAAGGCGCACCTTTTTCACCACACGGGCGAGAACGGATTCACCTGCGAGACCTGCGGCAAAGCGTTCAATCGCAAAGCGCGCCTCAACCTGCACATCAAGTTCGCCCACGAGGGTGCAGTCGGCTTCCAATGCGACATCTGCAGCAAGTCCTTCACTCGCAAGGAGGACCTCACCAAACACACCCTCATTCACACAGGAGTTAAACCGCACAAGTGCGACAAGTGCCAGAAAGCTTTCGCTACGAAATCGTCCCTTCAAGCTCACCTCAATACTCACAGACGCGAGCCACCGCAGTCGTGCACCGAATGCGGACGCGCCTTCATACGCCAGGATTGCCTCATGCGACACATCAGGGCCAAGCATCGCGACGTCCTCGAGGACGTCATGGCCGAGGCTGAGAAGCGACAATTGCAGACCCAACTACTCGACATCGCGTCCCTGGCGGCCCACAAGATACAAAGCGGCGAGTCGAGCGCCCTCTCATCGTCACAGCTACTCAAAGCGATCGCCGATCTTCTCAAGATACTCATTGAGGATGAAACTCTTCAGGTATTCGGATGGCCCGAGGCGCCGATCCAGGACGTCCTGGACGCGGTGATAAGGCGCTGCGGTCATCAGCCGACAACGGTGGACGACAGCGATTTGGTCTTCGAGGAACGATTGCGCGAAAATGTCAAGCTGTTGTTTACCGTGGTCATTGAAGACGACACCGTAAAATCCCTCCTGACCACTCAAACCGTCGACGAGGTTATTCtacacgtactcaaaatatcgAAAACATGA
Protein Sequence: MTSTIENTTDRILVTTNYQCVTCQRIFQNESLLSDHLNVCREEDDSADILELKTFRDYDSESSEEFDDSDTGNQNAGDRDTETTAAGTIQPVGENECHCCGEDLKIAHAGGEYKCANCELSFRKRSHLERHTIVVHWEIESCSCTECGTSFRDKKSLDKHRYTSHSNAKIYKCEPCDRYFTRRYHLNRHKLQSGCHGTLRNYYQCQVCNKSFTRKDNLREHLRTHAGVPQRQQKSCDQCDKKFSTPQQLLIHSRVHSGERPVKCDLCPKTFLSALAVKKHRRVHTGEKPFQCKHCQRKFAARETLNRHQRTHTGERPHVCQHCGKSFIQAAQLKAHLFHHTGENGFTCETCGKAFNRKARLNLHIKFAHEGAVGFQCDICSKSFTRKEDLTKHTLIHTGVKPHKCDKCQKAFATKSSLQAHLNTHRREPPQSCTECGRAFIRQDCLMRHIRAKHRDVLEDVMAEAEKRQLQTQLLDIASLAAHKIQSGESSALSSSQLLKAIADLLKILIEDETLQVFGWPEAPIQDVLDAVIRRCGHQPTTVDDSDLVFEERLRENVKLLFTVVIEDDTVKSLLTTQTVDEVILHVLKISKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01103723;
90% Identity: iTF_00439666;
80% Identity: -