Basic Information

Gene Symbol
kn
Assembly
GCA_963210295.1
Location
OY723396.1:6813034-6831320[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.7e-116 5.2e-112 375.9 0.2 205 456 1 250 1 262 0.89
2 2 0.3 3.3e+03 -3.1 10.5 441 512 270 342 259 378 0.62

Sequence Information

Coding Sequence
ATGAGGCGTTTCCAGGTGATAATATCGACGCAAGTTTGCGTGGAAGGACCCCACCTGGCGATCTCAGAAAATATGTTTGTTCATAACAACAGTAAACACGGTAGAAGAGCAAAGCGACTGGACCCCAGTGACCACGGCGAATATAACAGTCTTTACCCAGCACTGCCCCTTCAAACGCCCTGTATAAAAGCAATATCGCCGAGCGAGGGTTGGACGTCCGGTGGCTCGACCGTAATTATCATCGGCGAACACTTCTTCGACGGGCTACAAGTAGTTTTTGGAACGATGCTTGTCTGGAGCGAGCTGATAACCGATCACGCTATCAGAGTCCAAACACCACCTCGACAAATACCGGGAGTTGTCGAGGTAACATTGTCGTACAAGAGCAAACAATTTTGCAAAGGTTCACCAGGAAGATTCGTTTACGTCTCCTTGAACGAACCAACGATCGACTACGGCTTCCAGAGGTTACAAAAACTCGTTCCCCGGCATCCGGGCGATCCGGAGAAACTACCAAAGGAAATAATACTGAAGAGGGCCGCCGATTTGGCGGAGGTTCTTTACAGCATGCCTAGAAGCGGTAACACATCTATTTCGGGTACCCCAGGAAGTCCTGGCTCGGGTCATCCCTCGGCGCCACCAACGTCGAGTTCGACGACGGCGTTTAATTCCTACACCGGTCAACTCGCTGTTACCGTGCAGGAGAACGGCAGCGCGGCCAAGTGGACCGACGACGGTAGTTCCGTGACAACGGGTGGAGGAGGAGGCGGAGGTAGCGGCGGCGGAGGTGGTAATGGGGGTAACGGTAGCGTCGGTGGCAACAATGACGTCTATAGGCAGAGCAGTAGCGCGAGTCCACGTGGCGTCGTAACCGGTGGCGGTTATTGTGGAAGTTCTGCAAGTACACCGCACAGTCACAGCACGAGCGGAAGTTATTCCACGGCGAATCCGTACACCGGAAGTCCGACCCTCTACACATCACGGTTAGGAGACGTCATCGGCACACCGTTCAACATGAACCCTTTTATGCTGCCGGCATGCAGCCAGGGCTATACGGACGTTTCGAGCCCACTACTCTCGTCAACCGTGTATAGATCCCCTCAAATCAAGGGCTTATCGACCTTCATGAACATATGCACACGACTGCCACCACTGTACACCAACTTCGTAATCATGGGCGACCTTAATCTCAATACGGACGTACCATCTTATGACAGCAGATTTTTAGCGCATTTCGAGACAGCCAATAACATCTTCCTCGTTTCCTTCAGACCAACCCATCATACGTCAGGATCGGACACTCATATTGATCATTGCATTATTGATAGAGAAGCAAAGATCAGTCAACAGGCATTTCTAGCAGGCCTGGCCGCTATCGACTGGTCTCCATTCTACAGCTCTTTGTTCATCGATTTTGAAGTGTCGTTTCTCAACACGATACTTACCGACCGCCTAGATGATCACGCCCTACTACGACGCATCGTGCCTCGGCGCAACCCTGCACCTTGGATGACGGACGAAATTAAGAGTCTAATGCGTGAAAGAGACAAACTGTGGAAGCAATTCATCTGTAGTCGAAGTGGCCAGTGCAGTAGAACCTGCAGCGATGGAAATCGAGGCGACCAACGTATCCTCGCTAAATTCAAAGGCGCAGGAACGCTGTGCAGATGA
Protein Sequence
MRRFQVIISTQVCVEGPHLAISENMFVHNNSKHGRRAKRLDPSDHGEYNSLYPALPLQTPCIKAISPSEGWTSGGSTVIIIGEHFFDGLQVVFGTMLVWSELITDHAIRVQTPPRQIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLVPRHPGDPEKLPKEIILKRAADLAEVLYSMPRSGNTSISGTPGSPGSGHPSAPPTSSSTTAFNSYTGQLAVTVQENGSAAKWTDDGSSVTTGGGGGGGSGGGGGNGGNGSVGGNNDVYRQSSSASPRGVVTGGGYCGSSASTPHSHSTSGSYSTANPYTGSPTLYTSRLGDVIGTPFNMNPFMLPACSQGYTDVSSPLLSSTVYRSPQIKGLSTFMNICTRLPPLYTNFVIMGDLNLNTDVPSYDSRFLAHFETANNIFLVSFRPTHHTSGSDTHIDHCIIDREAKISQQAFLAGLAAIDWSPFYSSLFIDFEVSFLNTILTDRLDDHALLRRIVPRRNPAPWMTDEIKSLMRERDKLWKQFICSRSGQCSRTCSDGNRGDQRILAKFKGAGTLCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-