Basic Information

Gene Symbol
Arid4b
Assembly
GCA_963210295.1
Location
OY723385.1:78300656-78309804[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.2e-28 1.7e-24 86.8 0.1 1 89 319 406 319 406 0.95

Sequence Information

Coding Sequence
ATGCTGGTAAGTCAGAACGCGAAGAAATGTGTATCTTGGATTGGAGACGATCCGCCGTATCTGTCCGTCGGTACGGAGGTCAGCGCCAAGTACAAGGGTGCGTTTTGCGAAGCCAAGATCAGAAAGGTCGTGCGCTCCGTCAAGTGCAGAGTAACGTACAAACAAGGACTGGGAACTGCGACTGTAGCGGACGATCAGATCAAAGGAACTCTGCGAGTGGGGGCGTCGGTGGAGGCTAAACACGCGGAGAGAAAAGAGTCGGTCGAAGCGACCATCACCAAGATACAGGATTGCAGTCAATACACGGTTGTGTTTGACGACGGAGACATAACGACGCTGAGGCGAACGGCTCTTTGCCTCAAGAGCGGAAGACACTTTGCGGAGAGCGAGACGCTGGATCAGTTGCCGCTGACTCATCCGGAACACTTTGGAAATCCGGTTATCGGAGGCAGACGCGGCAGACGTTCGAGGCAAGCGCAGGACGACAGCAGCGAGGACGAGGGTAGTCCACCTCGCGGGAATCGCGACTCTGGCTCGGGGATCGGTGGAAAGGAGGGCGTCGAGACCGAGCCTGAGATCGGTCGTGTCGTTTGTGTCGAATTGGGCGACAAGAAGAAGAAGGATTACTGGTTTCCGGGACTGGTGGTCGCACCCACGGCGCAGGACACCGTAAGAATACGCGTGCGAGATGATTACCTCGTTCGTTCCTTCAAGGATGCCCGATACTATACCGTACCGAAAAAGGAGGCGATCGAATTTACAAAAGAATTGGGAAACAAAGTGGAGAACAGTGGACTGAAAGTGGCAGTGGAGAAGGCTCTCTTGTTCTTGGAAAAGAACGAGCTGCCGCCTCATTGGGACAGAGATTCGCTCTTTGGAAATGCCGTATCGAGCGGTAACAGCGACTCGGACGCGGATCTTGACTCCGACAGTTCGGACGACGAGCCACGCGAGGAGAAGGATCACTTCGTCGCTCAGCTGTACAAATTTATGGACGACCGTGGCACTCCTATAAACAATTGTCCGATGATCGGTAACGAAGACATCGATCTTTACAGACTATTTCGGGCGGTTTACAAGCTCGGCGGTTACAATCGCGTAACCAATCAAAATCTATGGAAATCTATAACGCGAAGATTGAGTTTTACTATGCAATCGACACCTTCCACGCACAATCTCGTCAAGCAGGCGTacaaaaagtttttacactcgtttgaagatttttatcgaaaattggGTTGCACGATGGTGAACCATCCGCGCGGTACCACGAGGAAGCAAAGACCCGGGCGTAGTCTGATACGCGACAAGGATCGAAATACACCAGTACCTACGACAACGACGGGGATGGGGACGGGGACGGGGATGGCGACGACGACGGTCGCGGCGGCGGCGGCaccagcaacaacaacaacaacatcgacggcggcagcagcagcaacggCGACGacaacgatgacgacgacgacgacgacgacgacgacgacgacgacgacgacgacgacgacaacgacgacgacgacgatgatggtgacgacggcgacgacggcgacgacgaTGGCGATGACGTCGATGACGACGCCGACGAATCAGCAAGTGACAATAACTCCTGGTCTAAAATCGAGCAGTGAATCCGTAAAGCACGAGAATGAGGAGGAAGCAGCTACTGCCGCTGCTGCCGTCGCCCCCCAAGCAACCTCGTCCGTGACCCCTCCGGCGCCtttgcagcagcagcaacaatcTACGCAACAGCGGGAAGCTCCGACGCCACCGGCGATTTGTTCCGCGGCTGTTATTCCTcatcagaaaaagggattcgttgaagaggaaaaaaaggagaaacGGGTCGAACAATCGATCGCTTCGTCTCTAACAACGAAGGATACCGTTAGAGAAGATGAACAACCGAGAACGAGCAAGAAGAAAGAAATAATCGAAGGGACGCTAAGTAGTCAGGAGAGCGAGGCGATTTTGGAGGCCGAAGGCGGTGAATCTTCGAGCAGCGAAAAATCCTTGAAACCAGCCCGATTTACACCAGTGCTTGCTGTCGGTGGTGGTGGCGCGGTCACTGTCGCGGCTAGTGGCCCTCCCGTAGCCGTTTCCGCCGCCGCCACTGCCCCCGCCGCTGTTGCCGTTACTCCCGCTCGTTCGAAATCGAAAACGAAAGAGGAGACGAGTAGCGTCAAGAGAAAGATTCACGAGAAGCGAAACAACAAGGCTCAGCAGCAGGATAGCAGTGGTGCATCGTCGAGCGGTACGAACGCACCGAATTCAGGGCTCGGACCGGCACCTGCGACCACTGGAACAGTGATAACGTCCAAAAGACCGGAAATTCTGACAAAACGAGAGGATAAATCGAAGGAGGAGGAAGCAACCAAAACTCGCTCAAGATCCAAGGACGACGCGAGCAAGCAACAGTCGAAAGCCAGTGTCgaagcggcggcggcggcggcggcggcggccgcGTCGGTAGCGTCGGGCCGGGAGACCCGAACACCGTCCCGCGAGTCGGAAAAAGGACGGAGCAACGCCCCGACGAAGCAGCGACGCATGACCGACGAGGAATTCAAGAAGCAGCAACGCGGCCGAAAAAGGCGCGAAAACGAGACGGAAAAGACTCGCCCCGACAAGGAGGACGTTGGCGGGGGAGGAGCCGAGAGCAACGCGAGCGCACCGACATACAAAGGACCCGTGGAACTCGGCGACCGACTCAAGGTTTATTACGGACCGACCCACGAATCTAAGGTAACTTACGAAGCCAAGGTTATCGATATCGAGAAAGACGGCAGTTCCGAGGCTATTTATCTGGTGCACTACACCGGCTGGAACACAAGATACGACGAGTGGATAAAACCTACGAGAATAGCGCAAAATTTCACCCAATCACAGACTCGTGTGAAACGAGCGAAAGCAACGCCGCGTCCTCAAACgccaagtggaagtggcagcagcggcggcggcagcagcggcggcggcggcggcggcgggggTAACAACGGCAACAGAGTGTCCAAGCAGGCTTCAAACGCGCCCCAACCAGCgccgccaccaccaccacctcCGCCACCACCGGCCTCGCAAAGCCGTCGCCGGGCTCAACAGAGCACGGTCGGTGGTACGACGAATTCTTCGAGTAGCGTAGCGGCGAGCGCCTCTTGCAGTGGTTCGTCGGGTGCTTCCTCGAATGGATCATCGTCCTCGTCAACGTCGATCCTTGGCAACAAACAACAGGAAATAACCGGCAATTCTCAACCGGCGAGATCGACGACACCGCTCTCCACGGCCAGTTCAAGCTCGAGAACCAAGAGTCCGGCAACTCCGGCGAGTTCCGGTCGTCCAGTGCGGAACACCAGAAACGTCGAGCACGGTGCCGAGCTACGAAGGCAAACCCGTAGAATGTCGAGTCGCATGGATACGGTACATTATTGCACGGAGAGTGACGACAGCGAAACGTACGAGGTAGCCGAGGGACCTCGCAGAAGACGTATTTATCGGCGCCGAGTCGACGAGAGAACAACCAGAAACGACGACAACCAAAGCGAGCTCGAGGAGGAGGAgcaggaggaggaggaagaagaagaagacgaggaggaagaggaggaggaggaggaggaggaagaggaggacgaggacgaggaagaggaggaagaggaagaggaggaggaggtggCGGTGGACGACGACGATGAGAAGGACGCGCCTGAGGAGCCGAGGAGAACTCGTAGATTGCGGAGATCCGTGGCAAAAGCTAATAAAGCCCTGAAAACGACCTCAAACGACACTCGAGATGTCGACGATGAAGAAGCGGACGAGGATGACGAAGAGGCggaggaagaggaggaagaGCAAGGAGGGGAGGGAGAAGAAGGAGacgaagaggaagaagaagaagaagtggtggaggaggaagaggaggaggaggaggaggcgaCGGCGGCAGCGGCAGCGGATGCGGTGGAGGCGGCGAAAGAGGAGAAAGACGCCGACGAGGAAAATAAATATGCATCGATTCCAACTAAAATAAGCTCGGACGCTGCCGCCTCGAGCTTACCGAGCGCGACAGCTTCTTCGCCATCCGAAAGGAATACCGCGTCTGTTGCGACGTACGAGCGTTCTTCCGCCCACGACCGTCACGACGATCAACCCAAGGGTCGTGATTTCGATCTCAATCAGATAAGATCGGAACTCAAGGGTTTCGACAAAGCCGTTAAATTGGAACTCGTGAAATTCGAGGCGGACGAAGAGGCCAGCAGCGGAGAACCAAACGTCAAATCCGAATTTCCTCAGGATCCGAAAGAAGATAAGAAAATTGATACGTCCGAGATGACCGATCATCCGCCCGATACGAAACCGATTTTAGACAGCGAAGACGTTTACGAGTTCAAGGAGCCTGAACCTTTCGAGTTTGAAGTTCGCAACAAGCGCGACTCTTCCGGTGACAAGGAAAAACCGAAGAAAAGAGTCTTCGAGGAGGCGGAACCCAAGAGTccgaagaagaaacaaaaaacatcgACGAGTCCTTCGTTCAAACAACAACAGGAAACAAGTAAGAGCGAGAACGACGCGTGCGTCGAACAGAAGAGGAAGGCACGACGaaacgcgacgaaaaaaattgacgaaaatccCGAGGTTGCTGCTTTCGCGACGATCAACAAAGCGTCTTTCGGAACGAAAGATATTTTGGATAAAGCGAGTCAAGCAGTCGCCTCGACGAATCAACCGAAACCTTTGCCGAGTCTACCACCGCCGTTACCAGCAGCTCCCCCACCTCCACCTCCTCCGCCGCTACCACCGGGCTCCGAGGAGCGCAAGAAAACGAATCTCGTCGTTCCAGCGTTGTTGAGCGATCCGCCGAAGGGAAACGAGGACGAAACGGACACGGATCCCGACGACCATCCTCGTCGTCGCGGTCGTCTCGTGATCTCGGAAGTACCGGAGACTGAGCCAGTGAACCTCTTTGCGTATCAGCAAGAAACTTATCCCCCCCCTGCGACCTCGGACAAACCGGATAGTCCCGCCGAGCATACCGTCGCACCGACGGCGATCGTTTCAACGAGCCTCATTACCGTTACAAGCGTAAGCCCAACCGTCTCATCTTCGTTGATTCCGATGGCCGAACGGAAAATACTGGATATCGCGAAAACCACTGGCAGCGGGGTATCAGCGAGTTTGTCGTCGAGCCTCGCTCCCGTACCTATAAGCGCGAGATTACCGGCGACCTCGACGATCGAGGAAAAGTTATCGGCTGCCGCGATGGCTTTTCGACAGGTCAGATCGAAGGAATCGAAacgtggcggcggcggcggcggcggcggcggtggcggcggtgGCGGTGACGATGACGCAACAGAGACGATGAGGAAAAGTGTAAAAGACGCGgtcggtggtggtggtggtggtggtggtggtgctgctgctgctgctgcttctgCTGCTGCTCACAAGAAATCAGAGACGGTGACGACAACTACCGCGGCGCTCGAGGGGACAGCTGCGGCCAAGAGAAAGGCAAACGAGGAATTGGCAAAATTCAAGTACGAGACAGAGATACCGACGAGAAAGCGAGAGATGGAGGAAACTACGAGACAACAAGAGGATGAACGTTGCCGGGAAGCGATGCGGGCGGCGATCAAACGAAAAGAGGAGGAGCTCGAACAATTGAAGATACGAAAGGAGGCGGAATTGAAGAAAATTGCCGAAGCTAAAGCATTATCGGTGGAGAATCGAAAGATAGCGGATGGGGAACAGACGCAGATCGAGTTTGGACGCGATGGCAACGGCGGCGGTACAAACGAGACGATTGCCACCGGTAATCGTGAGGAGGAGCAACAACGTAGAGAGACCATCGTGGATCGTCAGAGGGACAAGAGAAAGAAGGTGATAAGTCAAGAGTTTGTTGATTCAACGGACAGCAGTGATTCCGAACAAAAATTGGTTATCGACAGCGTTGCCGAGGGACGCGAGGACAATAAGAACGAGTCGCCGAATTTCGAGGCAAAACTCAACGCCGAGCTCCAACTTTTCCAACAGCGGGACGACGCGCAACGCGATGTTGTCGAGCCCGTAAATTTGCCACGTTCCGGCAACCTTCAGAATCCTTGTGTTCGGGCGATTCAACAGCAGAGTCAGTCGTGTTGTCAATCGATAACGAGCAAgctggcggcggcggcgacggCGTCCTCGTCGTTgtcatcatcgtcgtcgtcgtcttcgtcgtcgtcgtcgtcgtcgtcaaaGACCGAGGAGGAAGGTGAAAATATGAGTTCGTTACTCTGCGAGGAAGAGATACCGGGCTCTCCTGCGCCAGGACCCGACATTGCAGATCAGGATGTTAACGGAGAGACTCGGCCGACATCCAAGGATGAGcatggcgagaaaaaaatggttctcCTGGAAATGCCTTTCGCTAGCGCGCCCACCTCGGGGGCTCAGAGCGGTACAACCAGCGCCGTGAATGCCGGGCCTAGCCTTGGAACAGCCGTATCAAATTCCTGTAACGCTTCCGGTTCTGTAACACTTCACgatcagcagcagcagcagcagcaacaacaacaacaacaacaacaacaacaacagcagcagcagcagcagcaacccCCTGCGGGCGTTGGATCTCGGCATTTGCAACCTAATCCGATACAGCAGCAACCTCAACAACAACTGGCCGGTGCCGTGATAGCACCGCAGAGACGAGAAAGCAACGACGCAGCTCCGGTAATGGACAACACACCACCGACCACCCCCGACTCGACCATCTCCAATATATCCGGTTCTccaagagaggaagaaagaatCGGCGTATCGTCCCCGCTGTCGGAGGAAAACGTCAAGTCTCATCGAGATAGTTCCGAGGCGGACGAAAGCGGCACGGGGAAAGCGGCCTCCGGTTACAGTGAGGACGATACCATGCTGGCAAACGTTGAGGCCAACAACGCTGAGAGAACGTCAAAAACGTCGCTCAAGAGATCCGTCGAGGATCCCCAATcgccaaaaaaacgaaaaagaaatcgcaAACATTCCGAACAGAGTGGAGCCAACGTTGCTGTCAGTGTGGTCGTTAAGAAACCACCTGGACGACCACCCGCGAGTGGAAGACAAACGAGACAGGGTACCGCCGCGACGGCCGGAAGCGAGAGTGACGACGACACGAGCGAGTGTTCAAATCCATGCGCAATCGGTGCAAGTACGATGACGGGGGCAGTGGTCGGCGCTACCCCTACCGATACCACCAATACCGTTGCTACCGCCATCACGGAATTGAGCAATTCCTCAAGATCACCCAAACCGATCAAGTACAATTTCTTTGTTGAACTCGATCCCGAGCTCGACGGTAGTCAAAGGATAGCGGTGCTTCAGCAAAAGCTCTCAGAGTTGAAAAAAACATACAACGCGGTCAAGGTGGAACTTGCGGGTATCGAGAGACGACGAAAGAAATTGAGAAGACGAGAGCGCGAagCTCTGAAGGCAGCAAAAGCGGAAATGCAACAAGCGTGCTCTTGA
Protein Sequence
MLVSQNAKKCVSWIGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQGLGTATVADDQIKGTLRVGASVEAKHAERKESVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAQDDSSEDEGSPPRGNRDSGSGIGGKEGVETEPEIGRVVCVELGDKKKKDYWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEAIEFTKELGNKVENSGLKVAVEKALLFLEKNELPPHWDRDSLFGNAVSSGNSDSDADLDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGNEDIDLYRLFRAVYKLGGYNRVTNQNLWKSITRRLSFTMQSTPSTHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGTTRKQRPGRSLIRDKDRNTPVPTTTTGMGTGTGMATTTVAAAAAPATTTTTSTAAAAATATTTMTTTTTTTTTTTTTTTTTTTTTTMMVTTATTATTMAMTSMTTPTNQQVTITPGLKSSSESVKHENEEEAATAAAAVAPQATSSVTPPAPLQQQQQSTQQREAPTPPAICSAAVIPHQKKGFVEEEKKEKRVEQSIASSLTTKDTVREDEQPRTSKKKEIIEGTLSSQESEAILEAEGGESSSSEKSLKPARFTPVLAVGGGGAVTVAASGPPVAVSAAATAPAAVAVTPARSKSKTKEETSSVKRKIHEKRNNKAQQQDSSGASSSGTNAPNSGLGPAPATTGTVITSKRPEILTKREDKSKEEEATKTRSRSKDDASKQQSKASVEAAAAAAAAAASVASGRETRTPSRESEKGRSNAPTKQRRMTDEEFKKQQRGRKRRENETEKTRPDKEDVGGGGAESNASAPTYKGPVELGDRLKVYYGPTHESKVTYEAKVIDIEKDGSSEAIYLVHYTGWNTRYDEWIKPTRIAQNFTQSQTRVKRAKATPRPQTPSGSGSSGGGSSGGGGGGGGNNGNRVSKQASNAPQPAPPPPPPPPPPASQSRRRAQQSTVGGTTNSSSSVAASASCSGSSGASSNGSSSSSTSILGNKQQEITGNSQPARSTTPLSTASSSSRTKSPATPASSGRPVRNTRNVEHGAELRRQTRRMSSRMDTVHYCTESDDSETYEVAEGPRRRRIYRRRVDERTTRNDDNQSELEEEEQEEEEEEEDEEEEEEEEEEEEEDEDEEEEEEEEEEEVAVDDDDEKDAPEEPRRTRRLRRSVAKANKALKTTSNDTRDVDDEEADEDDEEAEEEEEEQGGEGEEGDEEEEEEEVVEEEEEEEEEATAAAAADAVEAAKEEKDADEENKYASIPTKISSDAAASSLPSATASSPSERNTASVATYERSSAHDRHDDQPKGRDFDLNQIRSELKGFDKAVKLELVKFEADEEASSGEPNVKSEFPQDPKEDKKIDTSEMTDHPPDTKPILDSEDVYEFKEPEPFEFEVRNKRDSSGDKEKPKKRVFEEAEPKSPKKKQKTSTSPSFKQQQETSKSENDACVEQKRKARRNATKKIDENPEVAAFATINKASFGTKDILDKASQAVASTNQPKPLPSLPPPLPAAPPPPPPPPLPPGSEERKKTNLVVPALLSDPPKGNEDETDTDPDDHPRRRGRLVISEVPETEPVNLFAYQQETYPPPATSDKPDSPAEHTVAPTAIVSTSLITVTSVSPTVSSSLIPMAERKILDIAKTTGSGVSASLSSSLAPVPISARLPATSTIEEKLSAAAMAFRQVRSKESKRGGGGGGGGGGGGGGDDDATETMRKSVKDAVGGGGGGGGGAAAAAASAAAHKKSETVTTTTAALEGTAAAKRKANEELAKFKYETEIPTRKREMEETTRQQEDERCREAMRAAIKRKEEELEQLKIRKEAELKKIAEAKALSVENRKIADGEQTQIEFGRDGNGGGTNETIATGNREEEQQRRETIVDRQRDKRKKVISQEFVDSTDSSDSEQKLVIDSVAEGREDNKNESPNFEAKLNAELQLFQQRDDAQRDVVEPVNLPRSGNLQNPCVRAIQQQSQSCCQSITSKLAAAATASSSLSSSSSSSSSSSSSSSKTEEEGENMSSLLCEEEIPGSPAPGPDIADQDVNGETRPTSKDEHGEKKMVLLEMPFASAPTSGAQSGTTSAVNAGPSLGTAVSNSCNASGSVTLHDQQQQQQQQQQQQQQQQQQQQQQQPPAGVGSRHLQPNPIQQQPQQQLAGAVIAPQRRESNDAAPVMDNTPPTTPDSTISNISGSPREEERIGVSSPLSEENVKSHRDSSEADESGTGKAASGYSEDDTMLANVEANNAERTSKTSLKRSVEDPQSPKKRKRNRKHSEQSGANVAVSVVVKKPPGRPPASGRQTRQGTAATAGSESDDDTSECSNPCAIGASTMTGAVVGATPTDTTNTVATAITELSNSSRSPKPIKYNFFVELDPELDGSQRIAVLQQKLSELKKTYNAVKVELAGIERRRKKLRRREREALKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01101846;
90% Identity
iTF_01102562;
80% Identity
-