Ocos024400.1
Basic Information
- Insect
- Ophion costatus
- Gene Symbol
- nfxl1
- Assembly
- GCA_951751655.1
- Location
- OX632368.1:19312545-19317572[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 1.2 1.5e+04 -3.3 1.1 15 19 136 140 135 140 0.81 2 21 0.73 9.6e+03 -2.7 0.9 4 10 171 177 171 177 0.91 3 21 6.8e-08 0.0009 19.8 16.9 1 19 185 202 185 202 0.99 4 21 0.61 8e+03 -2.5 11.5 3 19 240 258 238 258 0.80 5 21 0.16 2.1e+03 -0.6 0.3 5 10 283 288 283 290 0.93 6 21 0.1 1.4e+03 -0.0 9.6 3 19 296 315 294 315 0.79 7 21 1.6e-05 0.21 12.2 10.0 1 18 353 370 353 371 0.97 8 21 0.00064 8.4 7.1 7.5 1 12 405 416 405 416 0.94 9 21 1.5 2e+04 -3.7 1.5 6 10 426 430 426 430 0.97 10 21 2.2e-07 0.0029 18.1 15.3 1 19 436 454 436 454 0.94 11 21 1 1.4e+04 -3.2 0.6 6 10 483 487 482 487 0.89 12 21 0.00014 1.9 9.1 6.1 9 19 502 512 500 512 0.90 13 21 0.0017 22 5.7 6.1 1 11 522 531 522 532 0.96 14 21 0.93 1.2e+04 -3.0 5.8 14 18 573 577 573 578 0.89 15 21 1.1 1.5e+04 -3.3 0.3 9 12 595 598 594 598 0.80 16 21 0.27 3.5e+03 -1.3 0.4 6 10 604 608 603 609 0.88 17 21 8.2e-05 1.1 9.9 7.3 1 12 614 625 614 625 0.93 18 21 2 2.6e+04 -4.1 3.2 14 18 650 654 650 658 0.69 19 21 0.0034 45 4.7 19.1 1 18 666 682 666 683 0.93 20 21 3.8e-06 0.051 14.2 11.6 1 16 734 748 734 753 0.94 21 21 2 2.6e+04 -4.1 1.2 6 10 794 798 793 798 0.86
Sequence Information
- Coding Sequence
- ATGCAAAAGTTCAAGAAGGCTCAGGCCCGGAATCAGGCCTCGATAGAGAAACACCTGGCGGAATGGCGGGACGAGGCTTGCAGTACAGAGTCCTCGAGCGAGGACGAGGAGAACGCGATGAAGAGGAGAGACGGCTACGACGAGGCATTGCGAAGCGCGCTATCGAAACTCTTGTCGGACTATCGCGACGAGGGGGGTAACGTCGAAAAATCATTGTCCTATCTGACGGATGTATTCCAGTCCGGCGGAGCGACGTGCCTCATTTGTATATCCTCGGTCAAAAAAACCGATCCGATTTGGAGCTGCGGCGTGTGCTTCACGTTTGTGCATCTTGGATGCATTCTCCACTGGATAAGGGACAGTCTGAGCTACAAACGAGAGAACGGCGTCTCGACGTTATGGGCATGTCCAAAGTGTCGAACCGAGTATGCCGAAGAGGAGACACCGGAGCGTTACGTGTGCTTCTGCGCCCAAACAACGGATCCGCCGTATCAAGCGTGGCTCGTGCCGCACTCGTGCGGCGAGCGATGCGACAAGCCCCTGAGACCTGCCTGCGGTCATCGTTGCGTTTTACTTTGTCATCCGGGGCCCTGTCCGCCCTGTCCCAAGACAGTGACGATCGGCTGTTTCTGCGGGCGAACTTCGCCGCGTACGCGTCGCTGCAACGCCAAAGGGTGGAGCTGCGGCGAAACTTGTCGGCGAAAGTTGCCGACGTGCGAGCATCTCTGCGCTGAGGAGTGTCACCCGGCGGCGAGCGGTTGCCCGCCGTGCTCGACGATCGTCGCGGCGGCGTGTCGTTGCGGCGAGCGCGTGGAGAAACGGTTGTGCGGCTCGGCGGCCGATTGGCGCTGCGAGAAACCTTGCGGGCTGGTATTTTCTTGCGAGGTGCACGCGTGCGAGGCTCGTTGTCATCGGGTAACCGGCGAGGATTGCGGCGAGTGCCCAAGGGCGAGCGCTCGGGCCTGTCCTTGCGGGAAAAAACGTTACGAAGGCGTCTCGCCGTGCACGGCGAAGCAGATACCGACCTGCGGCGATACCTGCGGCAAACTTCTCGAGTGCGGCTCGCACTACTGCAGCATGCGCTGTCATCAGGATCGTTGCGGGCCGTGCCTTGAGGTCGTTACCAAGAGCTGCCGCTGTCGCGCTTACACCAAGGAGATCGCTTGCGTAAAGGAGTTTCATTGCAACAAAAAGTGCTCGCAAATGCGCACCTGTGGCAATCACGCGTGCAATCGCAAGTGCTGCGACTGCCTGTTGCGCGGTACTTTGAACGTTTGCGAGAAGCTCTGCGACAACACGCTCAACTGTCAGAAGCACAAATGCTCGGCTCCGTGTCATCGAGGACCCTGCTATCCGTGTCCGCGGAGCAACGTTGTCCGGTGTCGTTGCGGCGGTAGCGCGCTTACCGTACCCTGCGGTCGGCTCAAACGCCCAAAAGCCCCGAGTTGCAACAAATTGTGCAAAATACCACCGGTCTGTCATCATCCGAAACGAGAATCGCACAAGTGTCACTACGGCGCGTGTCCGCCGTGTCGGAAAATTTGCGCTCTCGTTAGGAAAACGTGCGGTCACTCGTGCACCGTCCTCTGTCACAACGAAGTATGGACCAAGACGCGAGTCGCATTGTCGAGCGTGACAAATGGCGGTGCCTGCTACTCCGTCGGAATATCGGAGAAAAGCCGAGTAGCTGCAGGCCCGGGCCAACTGAAAACTCTGCCCTGTCCACCGTGCGAGATCTCGGTGAAGATTACTTGCTTCGGTGCTCACGAGACTATCTCACTTCCGTGTCACAAGGCGATACCGTACTCGTGCGAAAGACCGTGCGGCCGAGTCCTCGAATGCACCAATCACACTTGCGAGAAGCCCTGCCACCGGCCGCAGTTCGGCGACGATTACTCCTCCATCGCCGAAGACAACCTCGATGAgaaacgaacgagcgcattATACGATTGTCCCGAGTGCGAAAGAGCTTGCACTCTACCGAGACCCGAAGGATGCTCGCATTCCTGCGGTAGACGCTGTCATCCCGGAGCCTGTTGTCCGTGCAACCAACTCGTCAAAGTCTCCTGTCACTGTGGCATCAATACGTTGTACAGGCGATGCGCTCAACTTTTGACCGTCGATCTCGTCGCTTCCTCAGAGGGCGACAAACGCAACGAGTTGCTCAAGTGCGGCAACCGTTGTCCCAAAAACTATCCCTGCGGGCATCGTTGCGCCAACGAGTGTCACCCCGGTGAGTGCCCGAACAGTCGGATTTGCGCCAAGAGGGTCAAGGTGTGGTGCGCCTGCAAGAGGATCAAGAAGGAGCTTACCTGCGCGGATTTGACGACGAGCGATGAGACGAAGAGGAGGGGGCGGCGGTGGCGGGGGCGGCTCGAGTGCGACGAGACCTGCCGTGGCATCGCCCGGGAACGCGAGAGGCTCCGCGAGACCGAGGAGACGAAAAAACGCGAGGCCGAGGATGCCATCAATCGCACGGAGATCGAGCGTTTCGAGAGAAAGTTCAAGCCGCGACGGAAGCACAGAGAAAGAACGCGTTCGATGGAGAATGGTGGCGGGAGGAGGCGAGGGGGGGCCGTGTTGAATAGTACGATAACGAGGGTAGCGATCGTGTTTTCCGTATTCTCGATCGTAATCGCCTGGGCCTACTTTTGCAGCAATAATCGAGAGACCGGCCGATGa
- Protein Sequence
- MQKFKKAQARNQASIEKHLAEWRDEACSTESSSEDEENAMKRRDGYDEALRSALSKLLSDYRDEGGNVEKSLSYLTDVFQSGGATCLICISSVKKTDPIWSCGVCFTFVHLGCILHWIRDSLSYKRENGVSTLWACPKCRTEYAEEETPERYVCFCAQTTDPPYQAWLVPHSCGERCDKPLRPACGHRCVLLCHPGPCPPCPKTVTIGCFCGRTSPRTRRCNAKGWSCGETCRRKLPTCEHLCAEECHPAASGCPPCSTIVAAACRCGERVEKRLCGSAADWRCEKPCGLVFSCEVHACEARCHRVTGEDCGECPRASARACPCGKKRYEGVSPCTAKQIPTCGDTCGKLLECGSHYCSMRCHQDRCGPCLEVVTKSCRCRAYTKEIACVKEFHCNKKCSQMRTCGNHACNRKCCDCLLRGTLNVCEKLCDNTLNCQKHKCSAPCHRGPCYPCPRSNVVRCRCGGSALTVPCGRLKRPKAPSCNKLCKIPPVCHHPKRESHKCHYGACPPCRKICALVRKTCGHSCTVLCHNEVWTKTRVALSSVTNGGACYSVGISEKSRVAAGPGQLKTLPCPPCEISVKITCFGAHETISLPCHKAIPYSCERPCGRVLECTNHTCEKPCHRPQFGDDYSSIAEDNLDEKRTSALYDCPECERACTLPRPEGCSHSCGRRCHPGACCPCNQLVKVSCHCGINTLYRRCAQLLTVDLVASSEGDKRNELLKCGNRCPKNYPCGHRCANECHPGECPNSRICAKRVKVWCACKRIKKELTCADLTTSDETKRRGRRWRGRLECDETCRGIARERERLRETEETKKREAEDAINRTEIERFERKFKPRRKHRERTRSMENGGGRRRGGAVLNSTITRVAIVFSVFSIVIAWAYFCSNNRETGR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01102464;
- 90% Identity
- -
- 80% Identity
- -