Ocos002458.1
Basic Information
- Insect
- Ophion costatus
- Gene Symbol
- Zfy1
- Assembly
- GCA_951751655.1
- Location
- OX632356.1:9817938-9831819[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 1.5 1.7e+02 3.5 0.0 1 23 80 105 80 105 0.92 2 20 0.043 4.9 8.3 3.7 1 23 112 135 112 135 0.91 3 20 0.0026 0.3 12.2 0.3 2 23 151 172 150 173 0.95 4 20 8.3 9.5e+02 1.2 5.6 1 23 179 201 179 201 0.97 5 20 0.0027 0.31 12.1 0.6 2 23 207 228 206 228 0.97 6 20 5.3 6e+02 1.8 1.2 6 23 482 499 479 500 0.91 7 20 0.00089 0.1 13.6 1.7 2 21 511 530 510 531 0.95 8 20 2.3 2.6e+02 2.9 1.0 1 23 596 618 596 618 0.82 9 20 0.079 9 7.5 2.2 2 23 796 817 795 817 0.97 10 20 0.2 23 6.2 0.2 1 23 833 855 833 855 0.93 11 20 0.01 1.2 10.3 0.6 1 23 863 885 863 885 0.98 12 20 0.061 7 7.9 0.7 2 23 994 1015 993 1015 0.96 13 20 0.19 22 6.3 0.1 3 23 1027 1047 1026 1047 0.95 14 20 0.0083 0.95 10.6 0.6 1 23 1124 1146 1124 1146 0.97 15 20 0.036 4.2 8.6 0.3 1 23 1234 1256 1234 1256 0.97 16 20 3.3e-05 0.0038 18.1 0.8 1 23 1262 1284 1262 1284 0.97 17 20 0.0045 0.52 11.4 2.5 1 23 1348 1370 1348 1370 0.97 18 20 0.0012 0.14 13.2 1.5 1 23 1376 1398 1376 1398 0.99 19 20 0.077 8.8 7.5 2.2 2 23 1497 1518 1496 1518 0.97 20 20 6.7 7.7e+02 1.4 0.2 3 23 1527 1547 1526 1547 0.82
Sequence Information
- Coding Sequence
- ATGTCTGAACGCTTGCCACGCCTGAGGGGCTTGCGAGCCCGTGCTCAGCACCGTTCGCCACTGGATCGCAACAGCTACGCTTTGGAGTTGAGCAAGCAAGAGGAGGGCGCTGACGGCAGCGGCGAAGATCACGAAGGCGACACGTCGGAGACTCTGAGCGAGGATGAACTCCGCATCGCCATCAAGGACGAACGAGAGGACGCCGCGTCGGACGAAAAGTCAGAGGCGGACAAGAGTTACGAATGCAAGACGTGCGAGGCACCTGTGGGATTTCCCACGCTCGTCGAGTACCTCCGACATCTCAGGGATGAACACAAGGAAAAGGGCCGCACCTACGACTGCCCGCACTGCGACTTTGTCTGCCAGCATCCCAAGAGCCTTCGGGAGCATAACAATGCAGAACACAAGGACGTCGAAGTGGCAGCCACGAGTGAAGTACCCGCACAAATTCGATGCACCATGTGCCCTCACACAGCGGCCGACGCGGCTGAATTGGAGATACATCAGCGCGTCCATCATCTCAAAAGGCGCTTCTTTCGATGCACTAAGTGTACTTACATGACCCACGTGAGAGCGCGTTACACCAAGCATGTCAAGTATCACTCCATGCCGATGATCAAGTGTGGCGATTGTGACTTTCGCACACCGTACAAGTGGAATTTGGACAGACATACGCGGAATCACGGCGGTGGTGGAGCTTTTCAGTGCCGAGCGTGCAGCTTTACTGCCGACATACGTCAGAGCCTCACCGTTCACGAGGCTAATCATCACGAGCCACCGGTCGGTCAAGCTCATCGAAAACTCAACGCACCTTTCGAAAGAAAATCGCGCAACGGTCCGAAGCGCTATAATCAGGTTGGTGCTAGTGATTTTCGTGACACAGAACAATCGGAGAGCCTCCCGGCTGCGAATGAAAGTTCGGGTAAATCGCCGTGCTCCGATACGGAAGGAAACTCACTGGAAGAGAGAAGAAATGCGATTGCCGGTGCTGATTGTATAGCGTTGAAATGTGAGGAGAAGGGTTGCCAATTCATCACAGCGTGGGACTCGGAAATGCAACGACACTTGGCCGAGTCGCACGCGCCCTCGTTGTCACCGATCAAACGCCGTAAACCTGTGCCAATGCTGATCCCGCTGAGTCCCGACAGCGACTCCGGAACCAACAAGAGCGTATCAAATGGACCGTGCACGACGCCTCTCAAAGTGCCAAGGGTACGAGTGAGACCGGAACTCGCACGTATTGCACGAGATACCGAGATAGCAAAACTGTATAGTAATAGAGAGTCCGGTGGCGCGAAAAAGGAGGCAGCACCGGCCGATTCGTTTGAGAAAAGGAATGCCTCGTTCTTCGACAAGCTGAAGGAGAGGTTGATGACGACAAGCGCCAGCATCACGGGTGTATCGCAAGTGGCCGTAAGTAGCCAGAACGATTTAAAGTGTTGGTGTACCTACAAAGCTAGTAGCCAGGAGGAATTGGCCAGTCATAGTCAGACCCATCACACAGCACTGAGTGTATCGGTCGGTATATCGCGCTGCCCTAAGTGTAGAAGGCGTTGTAAGAGTTCCGACGAGCTTCAAATGCACATGAATATTTGTCAAGCAACGAGCAATGATTTAACGACGATCGATAGTTGCCTGGAAAGTCCAGCAAGTTGTACGAATTATGAGGCCCGATCGTACAGTGGTGATTTTGAGTTTCCGTTTCAAGTGGACTGGGACGGAAGTTTCGGAGGACTGAATTCTTCTGGATCGTCGGTCGAGGGCCACACGGTCGGACGTCGGGTATTCAAGTGTCCCCATTGTCCATTCTGGGCGTCAACGGCGAGTCGATTTCACGTACACATTGTGGGTCATTTGAATCGTAAACCGTTCGAATGTTCGCTTTGCGCGTACAGATCGAACTGGCGCTGGGACATTACAAAGCACATCAAGCTCAAAGCGGCTAGAGATCCGGCGCACTTGACCGCCAGGGTGCTTATGACTGACGAAACTGGCCGACGTAATTATTCCAAATACAACAAATACCTTGCTCAGGGTACCGAGGAAGCGGGTTTGGACGAATGTCCAGTCGGAGAAGCCCAGATTGACGAGCCACCGAAGAAAATTCTGATAAGGAGTGACAGGAAGGATCTTTCTGGGCCACCGGAGCTTACACCCGCACCGGCCGTCGTCGACAGCGTCGAAACGAATTCCATGAGCATCCTAACTGCACTGAATCTTAGGCCACCACCGCCATTAAAGTCCGCTGGTAGAAGTCAGGGCCAATCGTTGCTCAAGACGAATCCGTCGACTACCACCGCAGTAGCCGTGTTATACGGCAATTCTGTCCCCCACGCGTCGATCGCAAACGCCAATTCGCAAGAAGAAACTAAGCGTACCCTCTGGAAGTGCAAACGGTGCAATTTCCGTTCATCCAACAAGGAGACTGTACTTACGCATGTTAAAACTCATTACGAGACGAGCGAGCAAGCACGCGCGGACAGTGAAAAGAACGAGTTTACTTGTCCAGATTGTCCATACATCAGCAAAGATGCAACGGTCATGGCGATACATCGAATTCATCACCGTGAATATCTTGGGGCGATCTTCAAGTGTTACCTATGCCCGTATTACGTCAGCACAAAAAAGGAATTACTCGAACACGCTAGACTCCACGGGGAAGATCTTGCGGTCGTTCATCAAAGAAGCATCGATTCCATTCCAGCTGGGTCGAAGCGGAAGTTGTCCCAAATACAGCTGAAGGACGGTGGTAAGATTTATGAAGCTACCTCGAAACCCGAAGTGGCGATCGAGCAAATCGTTCACTCGACGCCATCGGCAAGCCCACCCGGAAACGCGAGTTTCGTAACGCCGAGCAACAATAGTACCAATGGAAACGAGAGTGCAAGCGCACCGCCGCTTTTGCTCGACACACGTGCATTGCCGGACACACCGTTGGTCTGGGTCTCTCGGCCGGACGGCACGTTCGCGAAGATGCTAAAGTGTCGTCATTGTCCGTACGTGTCTTCGAGGCGTGTCGAGGTGCGGGATCACGAGATAATGCACGCGGTTTCACCGACCCCCGGGCCACTGGTGGCGTGTCCGGATTGTAGCTTCACGTGCGCGCGTCCCGACGTGATGGAAGCGCACGCCGATATGCACATGGGATCTCTCGGTACGGTGCACTGTCTCGTCGACGACGGCCGCACGGACGCGCAACAGCTCGAGGATCTCGCCACGCACCTCGGTCTCACGCGGAGTCCGGCTCTCGGGCCGGAGCCGGATCTCCGCGATTCTCGGCTTGTGCACTGTTGCTCCAAGTGCCCGGCGCGTTTTCTCTGCGAGAAAGAATTGCGAATACATCTTCGTTATCATTCGACCGAGCTCGCTTACTCGTGCGAGTGGTGCTCTTATGCGGCGCGACAACCGGCCCACCTCTTGGCGCATCACAAAGCGCATTCCTCCGCGTATCAGGAGCACACGCGCTATTTGTTGTCGATGTACGGTCACTCGCAGCGATACGCACCGCCCAGCACGGCCTGTGTCGAGTCGAACGATACGAGGCGCGACAACAATTCCGACGAGGTGACAAGCGAGAGCGGACGGGGCAAAGTCGCCTGGATCGTTGTTGAAATCACGGGGAATCAGGCGCCCTCCGGTTCGCAGAGTTATTCGACGAACAGCACCGAGAACACGGAAAACCGTAGCGGCAATCAAGTGTTCACGTGCGCCAAGTGTCCGGCTCGTTATTTCAAGCTAGACGCCCTCGAGTATCACATGACCTTGCACGGCTCGAACAATCGTTTCAAGTGCACCGAGTGCGACTACTCGTCGAAGACCGCACAGAATTTGATGAAGCATCAGGTCGTGCATCGCCGCCACGGTGAATTGAACGAACCAACGACCAATCGTTTTCAACAGGAGCAGGAGCAGAAAAAACAGACGCATCAACAGCACCAGGGGCAGCAGCAGACGGATCCGCAATTCGGTGTTTCCATAAGAGGAAATCCGAACTTCGTTTATCCGGCGAGCATGAGAAACGGTCGCGTCAAGGAGAAACGCTACAAGTGTCACAAGTGTCCCTCGGCTTTCGAGAAACGCGAACAATATCGCATTCACCTGTCGCTGCACGGGGCGAAGCAACGCTACCGATGCGACAAGTGCGACTATTCCGTAAAATATTACGCGAACTACGCTCAGCACGTAAAGAAGCACCAGGCGAATGCCGAGGCGCAGGCTCGAAGAAGGCAAGCCGAACCCGAGTCGATAAGCATCGACAGCGACAGCGTAAACGACTCCGACAGTCCGGAGACCCGTCGAGCTTcgaaaaatcgtcggaaatcgACCATCTCGTCAGCGCCAGCTGCGATACATGACAACCCTGAAAAACCCACCTCCAGCGTCTCGGCGGCAATTTTGCAACCCTCCAATCAGGACAAACAATCGGTGCTTCTCATGAAACGAAAAGGATTGTCCATCTCGTCGCTCGAGGATAAAGGAAAAATTTTGCGCTGCCAGGATTGTCCGTTCTCAAGTTGCGACAAAGATGCGATGGACTCTCACAAACGTCGTCACGGCATCGAGAGACTAACTCCGCCGTGTCCACACTGCaattacgtaccgcgaaaggaCGAGAACATCGGTGAACACATCAGGCTCCACTTCACGAGGCTCTACAAACCCGAATCTTATCTCATCGTTGAACTCCTCGCCCTCACCATGAGACCCGTATCAGCCGACAAAAAAGACTCGAAAGTCTGTGACGGCGAGATTCTATTCCGCGAGTGTagagacggaacatttttgcCAACGGCGGAAACTCGCGCACCGCCACCATCCTCTGCGTCCACGAGCGTCAACGGCTATCAGGAAAAAGTTATCGTCGATCCAAACACAGGTGAGACCCAACATCGCTGTTCTACATAG
- Protein Sequence
- MSERLPRLRGLRARAQHRSPLDRNSYALELSKQEEGADGSGEDHEGDTSETLSEDELRIAIKDEREDAASDEKSEADKSYECKTCEAPVGFPTLVEYLRHLRDEHKEKGRTYDCPHCDFVCQHPKSLREHNNAEHKDVEVAATSEVPAQIRCTMCPHTAADAAELEIHQRVHHLKRRFFRCTKCTYMTHVRARYTKHVKYHSMPMIKCGDCDFRTPYKWNLDRHTRNHGGGGAFQCRACSFTADIRQSLTVHEANHHEPPVGQAHRKLNAPFERKSRNGPKRYNQVGASDFRDTEQSESLPAANESSGKSPCSDTEGNSLEERRNAIAGADCIALKCEEKGCQFITAWDSEMQRHLAESHAPSLSPIKRRKPVPMLIPLSPDSDSGTNKSVSNGPCTTPLKVPRVRVRPELARIARDTEIAKLYSNRESGGAKKEAAPADSFEKRNASFFDKLKERLMTTSASITGVSQVAVSSQNDLKCWCTYKASSQEELASHSQTHHTALSVSVGISRCPKCRRRCKSSDELQMHMNICQATSNDLTTIDSCLESPASCTNYEARSYSGDFEFPFQVDWDGSFGGLNSSGSSVEGHTVGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKAARDPAHLTARVLMTDETGRRNYSKYNKYLAQGTEEAGLDECPVGEAQIDEPPKKILIRSDRKDLSGPPELTPAPAVVDSVETNSMSILTALNLRPPPPLKSAGRSQGQSLLKTNPSTTTAVAVLYGNSVPHASIANANSQEETKRTLWKCKRCNFRSSNKETVLTHVKTHYETSEQARADSEKNEFTCPDCPYISKDATVMAIHRIHHREYLGAIFKCYLCPYYVSTKKELLEHARLHGEDLAVVHQRSIDSIPAGSKRKLSQIQLKDGGKIYEATSKPEVAIEQIVHSTPSASPPGNASFVTPSNNSTNGNESASAPPLLLDTRALPDTPLVWVSRPDGTFAKMLKCRHCPYVSSRRVEVRDHEIMHAVSPTPGPLVACPDCSFTCARPDVMEAHADMHMGSLGTVHCLVDDGRTDAQQLEDLATHLGLTRSPALGPEPDLRDSRLVHCCSKCPARFLCEKELRIHLRYHSTELAYSCEWCSYAARQPAHLLAHHKAHSSAYQEHTRYLLSMYGHSQRYAPPSTACVESNDTRRDNNSDEVTSESGRGKVAWIVVEITGNQAPSGSQSYSTNSTENTENRSGNQVFTCAKCPARYFKLDALEYHMTLHGSNNRFKCTECDYSSKTAQNLMKHQVVHRRHGELNEPTTNRFQQEQEQKKQTHQQHQGQQQTDPQFGVSIRGNPNFVYPASMRNGRVKEKRYKCHKCPSAFEKREQYRIHLSLHGAKQRYRCDKCDYSVKYYANYAQHVKKHQANAEAQARRRQAEPESISIDSDSVNDSDSPETRRASKNRRKSTISSAPAAIHDNPEKPTSSVSAAILQPSNQDKQSVLLMKRKGLSISSLEDKGKILRCQDCPFSSCDKDAMDSHKRRHGIERLTPPCPHCNYVPRKDENIGEHIRLHFTRLYKPESYLIVELLALTMRPVSADKKDSKVCDGEILFRECRDGTFLPTAETRAPPPSSASTSVNGYQEKVIVDPNTGETQHRCST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01101643;
- 90% Identity
- iTF_01101643;
- 80% Identity
- -