Basic Information

Insect: Ophion costatus
Gene Symbol: -
Assembly: GCA_951751655.1
Location: OX632357.1:36464684-36467103[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.014 1.6 9.9 2.4 2 23 313 334 312 334 0.94

2 8 0.00024 0.027 15.4 2.0 1 23 463 486 463 486 0.95

3 8 3.7e-06 0.00043 21.1 1.6 1 23 518 540 518 540 0.99

4 8 0.00072 0.082 13.9 6.2 1 23 554 576 554 576 0.96

5 8 0.00015 0.017 16.1 5.6 1 23 582 604 582 604 0.98

6 8 0.00085 0.097 13.7 3.1 1 23 610 632 610 632 0.98

7 8 0.0037 0.43 11.7 8.4 1 23 638 660 638 660 0.91

8 8 0.0002 0.023 15.7 0.3 1 21 666 686 666 687 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.014	1.6	9.9	2.4	2	23	313	334	312	334	0.94
2	8	0.00024	0.027	15.4	2.0	1	23	463	486	463	486	0.95
3	8	3.7e-06	0.00043	21.1	1.6	1	23	518	540	518	540	0.99
4	8	0.00072	0.082	13.9	6.2	1	23	554	576	554	576	0.96
5	8	0.00015	0.017	16.1	5.6	1	23	582	604	582	604	0.98
6	8	0.00085	0.097	13.7	3.1	1	23	610	632	610	632	0.98
7	8	0.0037	0.43	11.7	8.4	1	23	638	660	638	660	0.91
8	8	0.0002	0.023	15.7	0.3	1	21	666	686	666	687	0.93

Sequence Information

Coding Sequence: ATGAATATTTCGAGCGGCATTGATGTTCAATTGAAAAACAATGACACTGTGTGCAGAGTTTGCTTGTCGTCCGACGAAAAAAACAAGTGTATTTTTACTTCACACATGACTGTTGGAAATCGCAATTCCGCAGATTTGTGGGAGAAGTTACAGTTTTACGGTGGGATCGAGgttaagcAGTACGATGGTCTTCCCTCGAAGATGTGCGAGAAGTGCGTTATCAATATACGCGTTGCGCACGATTTTCGAACACTGTGTCAAGAAAGTGACGTAAAATTGCGGCGTCTATATCGAAAGATGGTAAGCGACGGTTGTGAAAATTCAGAAAAAGGTCTCGGCGGCGACGCATCGACGGCAAGGGAATCTATGCACAGCTACGGTCCTTATGACACCCCGAGAGTAAATGTAACGTCGATGAGCGTCGCGTTTGATGGCGTTGTCAAAATGAGAGACGACGAATGTTTGCAAGGCAACGAAACGGCTCTGACGACtcgtgcaaaaaaatcgtcaacccTTTCGGACGATAAGAGTTTGAGCAATGCGCCGAACAAAGAGGAGCATGCCAAAGACGCCTCCAAACGATTGATAGTCTTCAGGAGAATCACCTCgatggaaaatttgaaaaattgcaaaGAGCTGCAGAGGCGGTACCTGAAAAAAACTAAAACCTCGAGGAAGAACGGACAAGATTGCGAAGTCGCACGGACGAAGACGAAGCGGACGGCCGCCGGGCGGAGAACTCACGAAAGAGAATTCGCGATCTCACGCTACGAATGTAGCGAATCCTACGAGGGTGATAAATCTTCGAGAGAGAGTCGATTTAGTCATGCTCCTGACAGATTTTCTCACGACCGATGCGAACAGGAAGTCAATCGAACCGCTGAATTTTCAGAGCACGGTGAAAGTCACGAATCGAAGGATACGTTCGAACCTTCGAGTTGCAACATTTGCAATAAGAATTTTCGCAAGCTCCTCACTATGGTGAGGCACTTGCACGCCCACAAGAGAGAAAATCCCGGAGCCGTGTACGCGATCTTGCGTCATATTAGGGAAAAAAGAAGGAGGAACAATTCAATACTGGAAAATGAAGATAACGTGACTCGCGAAGCTGCACAGAGGAAAAGGCTTTCGAACGTTCGCGTAGAAAGTTTACCCCGATTGGATAAATCTAGCGTACATTTGTCAGAATCACGAAACGATGTAAATTGTGTAACGGAAGCGTGGAACGTCGATTCGAATTGTATTAACGCGACGGAATGCTCGGATTCGTCTCGAGCTTACGACGTCCCCGATGAATCGGCATTTCCGAGTGACGATAGATCGGCTATTAAATTAATCAATATTTGGATTCGCGAAGAGTTGAATTCCGAAAACGAGGGCAAACGTTTTATCTGCAACACATGCAAGAGATCGTACGTTACCAAAGGTTCACTGTTGAAGCATAAATCCAAGATGCACGATGATTCTCCCAGGCGCGATACTTGTTCACAGTATTCTATCGGTCGGAACGAAATTCGCGAAAGCAGACGTAAGCTCGTAGAAACGAAAGGCTATCGTTGCAAAGATTGCGAAAAGTCGTTTGAGAACGAGACGAAACTGGCGAAACACAGGAAAATTCATATTCGCGACAAAGAACTCGAggacaaaaatttcaaacgttttttgTGCCACATATGCAGCAAAACGTTTCGACACAATACGGGCTTGATGTTTCACATGAGAACGCACACGGGTTACAAGCCTCACGTGTGCAAATATTGCGGTCGCGGTTTTACCTCCAACTCGAATTGTACGAATCACGAGCGCACGCATACCGGCGATAGGCCGTACGTTTGTCACTTTTGTAGCGCAGCGTTCGCAAAATCTTGCACCCTAAAGGCGCACATTACGACCCACACCGGTGAAGCGAATTATCACTGCAAAACTTGTGGCAAATCGTTTCGTAGGCTCAAGTACCTAAAGGAGCACTGCTTCACGCATACCGGTGAAAAACCGTACGCGTGCAAGATTTGCGGCACGGCCTACAGTCATTCCGGTAGTTTGTTCGTTCACGAAAAGAAGTGCAAAGCCCAATATGACAATTGTGAAGTGACGACGATGGGAGGTTATACCGACGAAAGGACGCTCGTCCATTCGCCCAATCTGGCTATTGATCCTGCGATTTTGTCCATCCCAAATCCCGATAATGTTCCGTTAATTGTCACAGAGAATGAAAGATTCGTCAACGACGCGCGGAGACTGGATAGGGGAAACGACAACGTTCATTCGAGCCTTCCAAATGGACCGTCAAGTGGGCGGAACTTCATCGCGCTGGGCCAAATCTTCCAAGCGTAG
Protein Sequence: MNISSGIDVQLKNNDTVCRVCLSSDEKNKCIFTSHMTVGNRNSADLWEKLQFYGGIEVKQYDGLPSKMCEKCVINIRVAHDFRTLCQESDVKLRRLYRKMVSDGCENSEKGLGGDASTARESMHSYGPYDTPRVNVTSMSVAFDGVVKMRDDECLQGNETALTTRAKKSSTLSDDKSLSNAPNKEEHAKDASKRLIVFRRITSMENLKNCKELQRRYLKKTKTSRKNGQDCEVARTKTKRTAAGRRTHEREFAISRYECSESYEGDKSSRESRFSHAPDRFSHDRCEQEVNRTAEFSEHGESHESKDTFEPSSCNICNKNFRKLLTMVRHLHAHKRENPGAVYAILRHIREKRRRNNSILENEDNVTREAAQRKRLSNVRVESLPRLDKSSVHLSESRNDVNCVTEAWNVDSNCINATECSDSSRAYDVPDESAFPSDDRSAIKLINIWIREELNSENEGKRFICNTCKRSYVTKGSLLKHKSKMHDDSPRRDTCSQYSIGRNEIRESRRKLVETKGYRCKDCEKSFENETKLAKHRKIHIRDKELEDKNFKRFLCHICSKTFRHNTGLMFHMRTHTGYKPHVCKYCGRGFTSNSNCTNHERTHTGDRPYVCHFCSAAFAKSCTLKAHITTHTGEANYHCKTCGKSFRRLKYLKEHCFTHTGEKPYACKICGTAYSHSGSLFVHEKKCKAQYDNCEVTTMGGYTDERTLVHSPNLAIDPAILSIPNPDNVPLIVTENERFVNDARRLDRGNDNVHSSLPNGPSSGRNFIALGQIFQA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01101618;
90% Identity: -
80% Identity: -