Basic Information

Insect: Ophion costatus
Gene Symbol: -
Assembly: GCA_951751655.1
Location: OX632356.1:49079327-49083036[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0042 0.48 11.5 2.9 1 23 308 330 308 330 0.98

2 17 0.0037 0.43 11.7 0.8 1 23 379 401 379 401 0.98

3 17 0.077 8.9 7.5 0.4 1 20 449 468 449 470 0.93

4 17 0.79 90 4.4 0.9 1 23 482 505 482 505 0.76

5 17 6.8e-07 7.8e-05 23.4 0.3 2 23 624 646 623 646 0.97

6 17 0.0029 0.34 12.0 0.2 1 23 653 676 653 676 0.97

7 17 0.02 2.3 9.4 0.0 3 23 686 707 685 707 0.95

8 17 0.00059 0.067 14.2 2.1 3 23 717 737 715 737 0.92

9 17 0.021 2.5 9.3 0.0 2 20 802 820 801 820 0.95

10 17 0.21 24 6.2 0.0 2 23 840 861 839 861 0.95

11 17 5.5e-05 0.0063 17.4 1.3 2 23 882 903 881 903 0.97

12 17 0.0015 0.17 12.9 0.2 1 23 925 948 925 948 0.94

13 17 0.23 27 6.0 0.1 3 23 977 998 975 998 0.94

14 17 0.029 3.4 8.9 0.4 2 23 1021 1043 1020 1043 0.93

15 17 4.9 5.6e+02 1.9 0.4 2 23 1066 1089 1065 1089 0.93

16 17 4.8 5.5e+02 1.9 0.0 1 23 1094 1117 1094 1117 0.87

17 17 0.011 1.2 10.2 0.1 2 23 1148 1170 1148 1170 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0042	0.48	11.5	2.9	1	23	308	330	308	330	0.98
2	17	0.0037	0.43	11.7	0.8	1	23	379	401	379	401	0.98
3	17	0.077	8.9	7.5	0.4	1	20	449	468	449	470	0.93
4	17	0.79	90	4.4	0.9	1	23	482	505	482	505	0.76
5	17	6.8e-07	7.8e-05	23.4	0.3	2	23	624	646	623	646	0.97
6	17	0.0029	0.34	12.0	0.2	1	23	653	676	653	676	0.97
7	17	0.02	2.3	9.4	0.0	3	23	686	707	685	707	0.95
8	17	0.00059	0.067	14.2	2.1	3	23	717	737	715	737	0.92
9	17	0.021	2.5	9.3	0.0	2	20	802	820	801	820	0.95
10	17	0.21	24	6.2	0.0	2	23	840	861	839	861	0.95
11	17	5.5e-05	0.0063	17.4	1.3	2	23	882	903	881	903	0.97
12	17	0.0015	0.17	12.9	0.2	1	23	925	948	925	948	0.94
13	17	0.23	27	6.0	0.1	3	23	977	998	975	998	0.94
14	17	0.029	3.4	8.9	0.4	2	23	1021	1043	1020	1043	0.93
15	17	4.9	5.6e+02	1.9	0.4	2	23	1066	1089	1065	1089	0.93
16	17	4.8	5.5e+02	1.9	0.0	1	23	1094	1117	1094	1117	0.87
17	17	0.011	1.2	10.2	0.1	2	23	1148	1170	1148	1170	0.96

Sequence Information

Coding Sequence: ATGAACGAGGTAATCGAGCCGCGTAATGTGGGAAACGTGTGCCGACTCTGTCTCTCAGCGCAGGAACCGAAGTCGTCGGTGTTCGCCGACGAGGCGATCGCCGGTGTACCGTTGGCCACGAAAATACAGACTTGCCTGTCAATCGAGATATTGGTCAGCGACCGAGTGTCCACCTCCGTGTGTTCCAATTGCTCGAAAAGGGTCGACGAGTGGTACACCTACAAGGAATACTGCCTGCGTTCTCAGGAAAAGTTGAAGCAATGTTTGGCAGAGCCGTCTACGGAAGGGGTCGCCAACATCAAGGCGGAGCCGCCCGACTACGAGGAGGCGGCGAGTCCGCCGGAGACGGCAGATGCGAGtgacgacgaagacgaggagGCGAGGGACGATATAGGCGAGCGGCGGATAAAGCGTGAGGCGGCGGATGACGAGAAAGCGGCGTGCATGGCATCAGGGGACGGCGCGCAGCTGCTGTTGAATCCAATGGCGGTGGGCGGTCACAGGGAGGAGGATGACGATGACGGGCAGGAGGTAGACGCTACGGAGAAATGTACGGGATCGCCGAGGCGCGGCGGCAGGAGGAAGCGGGCGAGGCGCGGCCAGCAGACTCACTTCCGAGGTTCGCGTCGCTACAAACAGAGATGTTTTCACTGCCAGATATATCTCCACTCCAAGTGGAGTTACGCCAAGCACACTGAGCGTTTTCACAGCGGCGATTTAGGATTGAGCGTGGACGCGGCTGTGGCCGAGCCGCTGGTCGTGCTGACGACGGAGAGCAACGACAAGAAGCGAAAAGCTACGGAGATGACGAGGGCGGACGACATCGAGGACGTGGAGGACGTGGAGGAGGAGCTCATAAGCCTGGAGAAGGATGCCCCGCTTACGCCGGTGCAGCGCAACATAATAAGCcaattgaagacattttcgtgTTACACGTGCGGTTTGTGCTTCGCCGATCGTCGCAGCACCTTGAATCACATACGTCAGCACATGCCCGATCTCCGGCCGTACACCTGTATCGCTTGTCTAACCGAGTTTGCCGATCGTTCCGTGTACAAGTTGCACTGCGGCGCCTCATTCGAGTGCGCGATGAAGATAGCCCTCGTTGTGCCGGAGCACGGTACGGAAAAATACTTCACGTGTAACATGTGCCTGAGATCGTTGCCCAACAGGAAGGATCTACTGAGCCATCTGTCGAGGCACTCCGACAGGCAGTACGAACAACTTACGGCCGCgccaccaccaccgccacccCTACTTCCGGTCGCCGTCGCGAAGAGACGCAAGTTATCGCGCGATCGCGTTATTCCCGCGCCTTACAAAAACGGTGACCCCGCTCACAATCACACGTGCCTCGATTGCGGAATGATTTATCGTTACAAGCAGAACAAACTGAAGCACGTTGCATTGTGCAAAACGTTGCCAGCCGAGAAGCGCATGTGTTACAGATGCGTCGACTGCGGACTCACTTTTCTCGCTTTTAACAAATTTCACTCGCACATCAATCTGGCCCACGGAAAGCGGCAAATAGCGTGTCATCGGTGCGGCTGCAAATTCGCGGTCGATCATTTCTTGTCGCATTATCGGCAACATTACGCAACGGAGAATTCGGAGGAAAGCGAGGAGGTACGAGGGTCCCTCGGGATGGATCTTTGGAGCAACGAGACAATGGGAGCGATCACGACATTGACGACGAACAGACGATGGAACGAGGCTTCGACGGGTGGCCTCTCTTACACGGCCAAGTCTCGTACGAGGCTTGTGGACGACGAAACAAAGATGGCCGGCCGCGAGGAGGGCGAGAGGCGAATCGCACGGGAAAACGGACGTTACTCGGTCAAAATGGATCCCGGCGGTAGCAGCGACGTCGAGTGTCGCGAGTGCGGCAAGGTGTTCGCCAATTATACGAATTTGCGACGTCACGCGCGTACCGTGCACGAGGACGGGGTCGGGCGTTACAGTTGTTTCACTTGCGCCAAGACGTTCGTGCGGGAGGAAGAATGGAGGGAGCACGTCGAGACGGAGCATCGTCGGGAGGCCGAACGAGCGGAAATTTGTCCTCTCTGTCCGTCGGCTTTTGAGAGCCGACAAGAGCTACTGTTGCATCGCAGGGCTGTTCACGGCTCTAACGGTGAGGATCGCCTCGCCTGCTACATATGCGGCAAGTGTTTCGCCAGCGAGACTTCCCTCAAGATTCACCGGGGTCATCATTTCCGGGTGAATTCGAGGCTGAGCATCGGTGGCAAGAAGATGGCGGCGGAGCGAGCGAACGCGGATCGCTCGAGAAGCAGCCAGGAGGGCATGCACGTCGGGCCGATGGTCTCGCCGCGGGCGAGGAAAACCTTCCCGAACGGAGGCGGAAGTGGCGGTCCGGCGAACGCCGAACGATCCCGCGAATCGCTTCAGTGTCAGGTCTGCGACGTAAGATTCGACAACGTCTCGGATCTCGGTCGTCACTTGTGGGACGTCCATTGCTCGCGGGCCAAGCCCGAAAAGCCTTTCACCACGGACGAATTGCGCTGCGAGCTCTGCACCAACGTATTGCCCGACGAGGAGAGCCTCCGCAGTCATCTCGAGTGGCACGAGCAAAATCCAATTTTGAGCAACGTTAGACGGGAGAAACGCGAGCCCGAGGTACCGGTCAGATGCGACCAGTGCGGCAAGTATTACAGCTCGATCGGTAACCTGAGGAAGCACAAGAAACGTCACATCGCTAGTGGTTGGTCGCTCGAGGGTTGCCGCGTGAGAAAGAGGGGCCCCCAAGCGGGCGGTTTCACGTGCGAGGTGTGTCGCAAGGTATTCGCCAGCAGGTCGATCCTCGCGAAGCACCGAGTCTCGGCTCATCCGTCTCGCGAGCAAACGCGATTAGATTCGTCGCCGCCACCGTTACTTCCGTTCGCCGCACGTGACTCGAAGAAGTCACTCGCGTGTCATCTCTGCGGCAAAATTCAGGCGGACGTGAGGGCTCTCGCGAAGCACGCTCGTGTCGTGCACAAAATAAGCAACGCCAACTCGATTATGGTCGATCGACCGGCCTCGCCACCGCCAGCGCCACGAGTCTCGTGCACCATGTGTCCCAAGTTATTCGGCAACTTGGCCAACATGAGGCAACACTTTACCAAGGTTCACGGCCGATCGATAATCGACAATCGTAACGCCCAAGAGCATCAGCAGCAGTATCAGCCGCAGGAGCTACGATGTGAGGTCGAGGGCTGCAAGCGTCTCTTCGAGACGCGCCTCGCCAAGCTCAATCACGAAAAGACCCACGTCAATGTTGTCTACACCTGCGCTCTGTGTCCCCGTCACACCCTCAATCCCGGCGCCATGGCCGAGCACATTCTCGCTGCTCATCGGGCCAATCGCATCTCCGGTTACGACAAAATGACACTCTGCAAGAAGATGGACCTCGACAAGTACGTCGTTATTGGAGCCAACGGCAGACAGTGTCCCGTATGCGCTATCACTTATCCCAATTACAAGGCTCTCAAGATACACTATCTCAAGATTCACGAGGACGAGGCCTCGTCGGTTTAG
Protein Sequence: MNEVIEPRNVGNVCRLCLSAQEPKSSVFADEAIAGVPLATKIQTCLSIEILVSDRVSTSVCSNCSKRVDEWYTYKEYCLRSQEKLKQCLAEPSTEGVANIKAEPPDYEEAASPPETADASDDEDEEARDDIGERRIKREAADDEKAACMASGDGAQLLLNPMAVGGHREEDDDDGQEVDATEKCTGSPRRGGRRKRARRGQQTHFRGSRRYKQRCFHCQIYLHSKWSYAKHTERFHSGDLGLSVDAAVAEPLVVLTTESNDKKRKATEMTRADDIEDVEDVEEELISLEKDAPLTPVQRNIISQLKTFSCYTCGLCFADRRSTLNHIRQHMPDLRPYTCIACLTEFADRSVYKLHCGASFECAMKIALVVPEHGTEKYFTCNMCLRSLPNRKDLLSHLSRHSDRQYEQLTAAPPPPPPLLPVAVAKRRKLSRDRVIPAPYKNGDPAHNHTCLDCGMIYRYKQNKLKHVALCKTLPAEKRMCYRCVDCGLTFLAFNKFHSHINLAHGKRQIACHRCGCKFAVDHFLSHYRQHYATENSEESEEVRGSLGMDLWSNETMGAITTLTTNRRWNEASTGGLSYTAKSRTRLVDDETKMAGREEGERRIARENGRYSVKMDPGGSSDVECRECGKVFANYTNLRRHARTVHEDGVGRYSCFTCAKTFVREEEWREHVETEHRREAERAEICPLCPSAFESRQELLLHRRAVHGSNGEDRLACYICGKCFASETSLKIHRGHHFRVNSRLSIGGKKMAAERANADRSRSSQEGMHVGPMVSPRARKTFPNGGGSGGPANAERSRESLQCQVCDVRFDNVSDLGRHLWDVHCSRAKPEKPFTTDELRCELCTNVLPDEESLRSHLEWHEQNPILSNVRREKREPEVPVRCDQCGKYYSSIGNLRKHKKRHIASGWSLEGCRVRKRGPQAGGFTCEVCRKVFASRSILAKHRVSAHPSREQTRLDSSPPPLLPFAARDSKKSLACHLCGKIQADVRALAKHARVVHKISNANSIMVDRPASPPPAPRVSCTMCPKLFGNLANMRQHFTKVHGRSIIDNRNAQEHQQQYQPQELRCEVEGCKRLFETRLAKLNHEKTHVNVVYTCALCPRHTLNPGAMAEHILAAHRANRISGYDKMTLCKKMDLDKYVVIGANGRQCPVCAITYPNYKALKIHYLKIHEDEASSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01102289;
90% Identity: iTF_01101576;
80% Identity: -