Basic Information

Gene Symbol
Snapc4
Assembly
GCA_951751655.1
Location
OX632356.1:17741034-17743793[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 1.4 1.9e+03 -0.4 0.0 2 18 175 191 174 192 0.88
2 6 2.1 2.9e+03 -1.0 0.0 22 43 244 267 231 270 0.80
3 6 3.3e-10 4.6e-07 30.4 0.2 3 44 278 321 276 323 0.94
4 6 7.2e-10 9.9e-07 29.3 0.0 3 43 332 376 330 378 0.96
5 6 4.8e-10 6.7e-07 29.9 0.0 1 45 385 430 385 431 0.92
6 6 1.4e-11 1.9e-08 34.8 0.0 1 41 438 478 438 480 0.97

Sequence Information

Coding Sequence
ATGAGCGATCCGGAGAATGATCGGGAGTTTCTCGAGGAGATAAAAGCCCTTGAAGATGCATTGGCAATCGAGCAACAGCATACTGAATCTCCGAAACCCCAATGCTGCGTTCTGGAAGAGGCAAACCTGCAGCACGATCTACCTCGTCCCCCCTATATGGTGTCGTCATCCAGAGGATTTGGCCAAGTTGAGCCCTGCCCAGACaagaaggaagaaaaggaaAGGAAGAGGGGTCTGACTGAGGGCTGGTCCGCATACGAAACTAACATGCAATTGATCGAGTTGTTGCGCGAGACCAAACGCGAATTGTTGTTAATACTGGAGCATTGCCGGGAGAACAGAGCGATCCTGGAGGAAAAAATTCAGGCGCACGCACGCTCCAAGAGCATAGAGTATATGCCTGTGTGTGCAGCGGCAATGCCTTACTTCAAGGATGCGCGCGATTATCCAGCACCGATGAATAGCGACGGCAAGACAAAGCGGAGGAAAGAAGAGTTGAACTTGGAGAGTCTGCCTACGCCTGTTCCATGGACGCCCAGGGACAGGAACACCTTGTGGAGGGCAATCCGTCAGGAGGCGGCAGACTCCTTCATGCACTCGCGACGGCTCGGCGACCACGAGTCTGAGCATTGGGGTGAGGAAGAGACAAAGCAAGACGGCGGTGCAGGGCCACCCGCATTGCCAAAAAACTTTAAAGCCCTGGTAGGGGCGCGCGGAGTCCGAGAGTTTGACTGGCTGAAAATAGCGGCCCAGAATTTCGACGACAGACATTCGGCGGATGAGTGCAGAGTGATGTGGCAGGTGTTTCTTCACCCCGACGTCAACCGGTACAGATGGAGCAGGGACGAAGATGCACGACTGGAGCTACTGGTAGAAAAGTACTCTGCACAGAACTGGGATGCGATAACGAAAGAGTTGGACACGCGAAGAACGGGTTATCAGTGTCTAGTGAGGTATAAGAGCGTCGAGCGGACAAGTCGCCACGATGACGATGCTTGGTCACCCACAGAGGATCACAGACTCAGCCTCTTGGTTGAGCAATTCCGGATCGGTGACTACGTACCCTGGGGCACAGTGGCGCGATACATGCCTGGCAGGATCAAGACTCAGGTCTACTATCGGTGGGTATACAACAGCGCACCTCAATTCAAAAAAGGGAGATTTACCCGTGACGAGGATCTCCGATTGCAGGACGCGGTCCAACTTTACGGCGAAAATTTCACACGTATCTCGAATACCATCATACCCGAAAGATCGAGCGTACAACTTAGCAATCGTTACAAAACTTTGATGATGAGGAAACGTGGCGCACGAAATACCTGGAGTATAAGCGAGGACGCTCGTCTGCTGGTGCTGTACAACGAGTACGGGGCCGATTGGTCGAGCATCGCCGGCGCGATACCCAGCAAAACGAGGACTCAGGTGCGTCATCGCCACAAAGCGATAACCCGATACTGGGCCAAGGGTGTTTCCCTGTACGAGATACCACGGACTCGCGCACCCAACGGCCTTCCAGGCGTCCAGGACGCGCAACAAGACGGAGTGGAGAAGGTAAAGACGATACGGGTACACACGAACTCCGATCTGAACGCTCACGGCAAGCGTGAgacccttaagaaaaaaaaacgcgccagGGAGGCGGCCGAAATGGAGAAAATCGATCTCGAGCTCATGGAATACTTTCATCATCTGCCCATGACCAGCGGCACAACGACACCGGGTAGAAAGAGAAAGTACTACGGAAGTGAGGAACTCGAGGACAACGCACGAAAATTGCGTCTCCTCTTGAAGACCTTCGAGGCTGAGCTCGAAATACCCGAAGAACTTGATGACCCGAGACTCACCGAAAAGGACAAACAGTTGCTCGAGTCAGTGAGAAAGCGGCAGACGCCGTGCGCTAAAACGATGCCTCGTCCGCCAAACGCTGTTGAACGTTATTGTAACGAGAATCCGAGGCCCGCGGAACAAAAACATTTCGCGTGCTCCGGTCATTGCATCGACAGGCGAAAGAAATTGCCTTTCCACAAAAACATCGATTATCAGTCACCAGCTGATCTCGATCACTGCCGGATCATATTGAACACCGAGTCCTTTTGCACCCCCGGAGAAATTGTTAAACTCATCGGCGAGGATATGGATACAGAGTTTGATAAGATCTCGAGATTCGTGGCGAGTTGTACGAAAGAATTGCGAGTTGTCGAGAGAGTCTACGTAATCGGGCCCGAGATTTGCTCGAAAATTATGTCGAAAATCAAGGTCATGCCCGGAGGCACAACGGTCACCGGAATCGACGGGATGTTGCAAACGCCGAGCGGCGGCCCAAGCAGCAGAAATTTTGCACGAACGAAAAAGCGTACTTCAAAAACAAAAGACAAAGCCTGGATTTCGAGCTCGTGCGACGGTATAATTCAGTGCTTGGATCAACCCGTAAATTGTTTGGAACCCAACTATCACACCCTCCTCGCGTTCCATCACCTCTCCCATAAGCCTAGGACGAGCCCCGAGCGGTGTCACCCGCGAAAAGTGTCCTCATCGATGAGCCCAACAGCCAACAGGTCGATGGAAACATTTCGAAAGCGTCTCGTACAATTGTTCAAGTATCCCATCGGATTGTCGCATATCTTTCGCCCGGATGTCGACGTCGCGACAAATTTGCAGTGCTTCGAGGCCTCGGACTCAAACGTCATTCCTATCAATAACGTCCGAACTGACACCTTTGATGTCTCATCATCGACGCCGAGGAAAAAAATCCGGCCCTAA
Protein Sequence
MSDPENDREFLEEIKALEDALAIEQQHTESPKPQCCVLEEANLQHDLPRPPYMVSSSRGFGQVEPCPDKKEEKERKRGLTEGWSAYETNMQLIELLRETKRELLLILEHCRENRAILEEKIQAHARSKSIEYMPVCAAAMPYFKDARDYPAPMNSDGKTKRRKEELNLESLPTPVPWTPRDRNTLWRAIRQEAADSFMHSRRLGDHESEHWGEEETKQDGGAGPPALPKNFKALVGARGVREFDWLKIAAQNFDDRHSADECRVMWQVFLHPDVNRYRWSRDEDARLELLVEKYSAQNWDAITKELDTRRTGYQCLVRYKSVERTSRHDDDAWSPTEDHRLSLLVEQFRIGDYVPWGTVARYMPGRIKTQVYYRWVYNSAPQFKKGRFTRDEDLRLQDAVQLYGENFTRISNTIIPERSSVQLSNRYKTLMMRKRGARNTWSISEDARLLVLYNEYGADWSSIAGAIPSKTRTQVRHRHKAITRYWAKGVSLYEIPRTRAPNGLPGVQDAQQDGVEKVKTIRVHTNSDLNAHGKRETLKKKKRAREAAEMEKIDLELMEYFHHLPMTSGTTTPGRKRKYYGSEELEDNARKLRLLLKTFEAELEIPEELDDPRLTEKDKQLLESVRKRQTPCAKTMPRPPNAVERYCNENPRPAEQKHFACSGHCIDRRKKLPFHKNIDYQSPADLDHCRIILNTESFCTPGEIVKLIGEDMDTEFDKISRFVASCTKELRVVERVYVIGPEICSKIMSKIKVMPGGTTVTGIDGMLQTPSGGPSSRNFARTKKRTSKTKDKAWISSSCDGIIQCLDQPVNCLEPNYHTLLAFHHLSHKPRTSPERCHPRKVSSSMSPTANRSMETFRKRLVQLFKYPIGLSHIFRPDVDVATNLQCFEASDSNVIPINNVRTDTFDVSSSTPRKKIRP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01101253;
90% Identity
-
80% Identity
-