Basic Information

Gene Symbol
ct
Assembly
GCA_951751655.1
Location
OX632365.1:16591840-16625007[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.5e-27 1.3e-23 83.3 0.0 3 72 542 612 540 617 0.95
2 3 2.7e-32 1.4e-28 99.2 0.0 2 77 954 1030 953 1032 0.96
3 3 1e-30 5.4e-27 94.1 0.0 3 76 1208 1282 1206 1285 0.96

Sequence Information

Coding Sequence
ATGCATTCTCGCGACTACGACGACAAGGCGAGTACGAGCGATCCTGAGCGGAGGGTGATGAAAAAGGGTTGCAGGAAAGATAATGCCATCAGCCGATTGGTGGACGAGGTCTCGAGGTTACAGCAGAGCCTGCAGCGCCTTCAGGAAACGAGCTCGCAAGCGACGTCGCGCCTCGAGGAGGAGCTCGAGGCACGGCGACAGCACATCACCCGCTTGGAGAGCAAACTCGAGCGTCAGCGGGACTACGAGGATATCAAGCGTGAGATGAGCATTTTGAGATCGGTCGATCTGTCGCAAATACCGACCGGCGAGCCCGGCAAGAGCCTCGAACATCTCCTAATGGAAAGGTCGAAGGCGTTGCAACAAGCCGAGACACTCAAACCACCCAGCACTCCGGATGCACTCGGTGGACTAGCCTCACCCCTTCAGCGCGCCGCGACCGCTTCACCCCACGCACTCGTTGCTGGTGTTGGTGGTACCGCCGGTGTCGTGACTGGTGGGAGTGCTGCGCCGCCACCCGCGTCCCTCGTCTCCTCTTCCCAACAAGCAATCCCGACGCGCTCGACCCCGACACCCTCGTCGGCTGCTTCGACCGCCACGAGTCTCCTATTCCCGCCACCTCTCCAGAACGTCGAGACCTTTGGCTCTTTCCTCGGCGAGGAGATCGTCGCCAACTGGAGGCGGTCCCTGGAGAGATCGATCATGAGCCAGCAgcagcatcagcagcagcagcagcaacagcagcagcagcaacagcatcaGCATCAAGcccaacagcagcaacaacaattGCAACCACAGCAACAGTCGCACCTACAGCAACAAGCACTAACGTTGCAATCGCATAACCAAGCACTCTCCCAACTCCAGCAGACACAGCCCGTTGTTGCTGCCGCTGCTACTGCTGTTGCGGTCCAACAGGCCCTGCAGCATCAACAAACGTTGCACTCCCTGCATCCACCAACGGCTAGCCTAAATCACCTTCCATCGCCAACAGATAATCCATCCTCGTCGGCCTCGCTAACGAACGCACCTGCCAACTCGATGACCCCCCAATTGGGCGGTAGCAGCCTTACGAGTGGCGGCGGTGCCAGCGGCGTTTGCCTCGACGCTACGGAAAAGGCCCCAACGCCGATATCCGGTCACGAGACACCCGCGCCGCCCACGCCGTCCTCGACGGTGGCGCTGACGTCGCCCTCGATACCGACGCCCGTAAACCCACTGCAACCGCCAACGCCGCATTCGGCCTCGATCGCGACGAACGCCATCCTCGACACGTTACACACGGCCAACAGCGCCGTCACGAACGGCTCGAGCATAGCAATGCCGCCGGGTGTAATGCCGACGAACCTTCCCCCAAAGAGCCCGCTGGAGGAATCCTgccacaacaacaacaacaacagccatCACCTGGCCAACAACAACATCGGCGGACTCGGCGTTCTCGACGCGCTCAAGAGCCCCTTCCGATTCGACGATCGGACGCATCCCTTCAGATTCGGCGACGAGTACGGGGCTGCCGGAATGGCCGGAAGACTCGGCGAGTCCCTCATACCGAAGGGCGACCCCATGGAAGCCAGACTCCAGGAGATGTTGCGCTACAACATGGACAAGTACGCCGCCCAAAATCTCGACACGCTTCACATAGCGAGGCGCGTCAGGGAATTACTCTCGATACACAATATCGGACAGAGGCTCTTTGCGAAGTACGTGCTCGGTCTTAGCCAGGGCACGGTCAGCGAGCTACTCAGCAAGCCAAAGCCCTGGGACAAGCTCACGGAGAAGGGACGCGACAGCTACAGAAAGATGCACGGATGGGCTTGCGACGAAAACGCCGTGATGCTACTCAAATCGCTCATACCGAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGTATGCCAGCATTTGGACGTGCTCCACAGGACGGTGGCACGACGGACATGAGCGACGAGAGGCTCGCCCATATACTCTCGGAATCGGGACATCTGCAGATGAGCAGAAGCGAGCACGAGACGTCAAACGACGCCGACAGCAAGAGTCCCAGCAGACTCGGCTGCCCGAGCCCCTTCGGCAAGGACCGGATGGACAGCCAGAACAGAAGACTGAAGAAATACGAGAACGACGACATTCCCCAGGAAAAAGTTCTGCGAATATATCAAGAAGAGTTGGCCAAAATGATGGGCAGGAGAGTCGACGATATACGGGGCCCCCGTGACTTTCCACCGAGCGCGATGTTTCCCCACTTTTTCAGCGGTGGCCAGGGTCTCCAAAGTATCGAGCGCACGCAGGAGGACATAAGAATGGCACTGGACGCTTATCACCGTGAATTGCAAAAGTTGAACGTGGCGCCCGGTCAGAATGCCGCGTTGGCGGCAGCGTTGCCAGGTCTGCCGAACATACCGGGCCTCCTGGCCCTCCAGCAGCACGCACTCCAGCAGCACCACATGGCGACGGCGGCGAACGGTGGTGTCGTCCAGGATCTCAGTTTGGGCAAAATCGATCCGCGCAGCGGCAAGATTATGAACGGCGTTACGGACGACGACAAGGACAAGATGGAGGAGGCTATGAGACACGCGGGCAGCGCATTCTCGTTGGTCAGACCGAAGCAAGAGCCGAGCGGGCCCCAATCGACACCCGGTGGATCGAGCGCGAGTTCGCCGCTCGGTAACTCGATATTGCCACCCGCGATGACGCCGAACGAAGAATTTCCGGGCGCCGCGGCGGCTAGTCCGCTCCAGAGAATGGCCTCGATAACTAACAGCCTGATAAGCCAACCCTCGACGCCCACGCATCACTCGACGAGCCAGCGACCCCTAAAAGCCGTCTTGCCACCGATAACCCAGCAACAATTCGACATGTACAACAACCTCAATACCGAGGATATCGTCAAGAGGGTGAAGGAACAGCTCTCGCAGTACTCGATCTCCCAGCGTCTGTTCGGCGAGTCCGTGCTCGGTCTCTCCCAGGGCTCCGTCTCGGATCTCCTCGCGAGACCGAAACCCTGGCACATGCTCACCCAAAAGGGCCGCGAACCCTTCATAAGGATGAAGATGTTCCTCGAGGATGACAACGCCGTGCACAAATTAGTCGCCAGCCAGTACAAAATAGCACCGGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCATGCGGAACACCGATGAAGCCAATGCCACCTACGAAGTTGGTGCAGGAGCAGCTGCAGAACGCCGCGAAGGCGCAAGCGGCGGCACAAGCGGCGGCTCAGGCAGCGGCGGTTGCGCAGCATCAGCAGGAGAGTCAGTTGCAGTTGGGTCCGCCACAGCCGAGTCCGCAGCACCCCTCGCACGGCCAGCAGCCGAGCCCGTTGATGCTGACGCCACCGGGGCCTCATCATCCCCTCGGCCAACTGAGCATACAGGATTTGCAGAAGAAGCAACAGCAGGCACAGCAGGCTCAGCAGCAACAACAGGCACAGCAGCAGCACCAGCAGCAGcaccagcagcagcaacagcaccaGATGGGCCTACACTCGCCGCATCATCAGATGGCCCCGTCGCCGTTGCGAAACCTCCATCAGCACATCTCACCGAGCGTCTACGAGATGGCCGCGCTCACGCAGGACTTGGACACCCAAACGATCACGACGAAGATCAAGGAGGCACTTTTGGCGAACAACATAGGCCAGAAGATATTCGGCGAGGCGGTGCTCGGCTTGTCCCAAGGCTCGGTTAGCGAATTGCTCAGCAAGCCGAAACCCTGGCACATGCTGAGCATCAAGGGAAGAGAGCCCTTCATAAGGATGCAAATGTGGTTGGTCGATCCGCACAACGTCGATCGGCTGCAAGCCTTGAAGAACGAGAGACGGGAGGCGAACAAGAGACGACGAAGCAGCGCTCCGGGCCACGACAACAGCTCGGACACCTCGAGCAACGACACGGCCGAGTTCTATCACGCCTCGTCGCCCGGCCCCGGACCACCGTCCGCCAAGAAGCAACGCGTTCTCTTCTCCGAGGAGCAAAAGGAAGCCCTGAGGTTAGCTTTCGCGCTCGATCCTTATCCCAATGTGGCGACGATCGAATTTCTCGCCGGCGAGCTGGCCCTCTCGTCGCGAACCATCACCAATTGGTTCCACAATCATCGCATGAGGCTGAAGCAGCAAACGCCACACGGGCAACCGGAGCAACAGTCGCCCCGCGAGCCCGGCCAACCCTTCGATCCTGTACAATTCAGGCTACTGCTCAATCAACGTTTGCTCGAGATACACAAGGAACGTTTGGGTATCGGCAACGTACCGATTCCCTACGGGCCCTACTTCAATCCCAACATCGCGAGCCTCGTGAGCAACGCCCTCAAGGAGCAATGCTCCGGCCTCGATCTATCGATGGGCACCCTCAAGAGGGAGCCCAATCAGGAATTCGAGGACGACGACGGGGACGACGGGATGAGCAACCTCGGTAGCGAGGACTCTGAGGGCTCCGGGGGCAGTATGAAACGCGGCGGTGACACGACGGATCTCGGCCAACAACCGTCCCAACCAACGACCGCCCGATCGAACAGGAGAAAACCCGCGGCTCCTCAGTGGGTCAATCCCGAATGGCAGGAACCACCGAGAACCGGCGACGAGGTTATTATCAACGGCGTTTGCGTTATGCAAACCGACGACTACGGGGTCAAGCGGGAAAACGAGGAGACCGTACGTGTCGAGCCGACACCCGTGCAGGATCGCTACGACGAGGACGCCACGAGCGACGCTTCCTCCGTCGTTTCAACCAATAACCCGCAGGAACGCGAGAGCCCGTTGCCCAGCCTCAAGTCCCCCCCTCGGAACACACCGTCCACCTCGCCGAGACCTCCGTCGTCCTCGCAACAGCAGCAAACCCAACAACTCACCACCGACGAGGATATACCCACCAAGGACATCGTTAAAAACGAACCCGAGGAAACGTGGGACTATTGA
Protein Sequence
MHSRDYDDKASTSDPERRVMKKGCRKDNAISRLVDEVSRLQQSLQRLQETSSQATSRLEEELEARRQHITRLESKLERQRDYEDIKREMSILRSVDLSQIPTGEPGKSLEHLLMERSKALQQAETLKPPSTPDALGGLASPLQRAATASPHALVAGVGGTAGVVTGGSAAPPPASLVSSSQQAIPTRSTPTPSSAASTATSLLFPPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQQHQQQQQQQQQQQQHQHQAQQQQQQLQPQQQSHLQQQALTLQSHNQALSQLQQTQPVVAAAATAVAVQQALQHQQTLHSLHPPTASLNHLPSPTDNPSSSASLTNAPANSMTPQLGGSSLTSGGGASGVCLDATEKAPTPISGHETPAPPTPSSTVALTSPSIPTPVNPLQPPTPHSASIATNAILDTLHTANSAVTNGSSIAMPPGVMPTNLPPKSPLEESCHNNNNNSHHLANNNIGGLGVLDALKSPFRFDDRTHPFRFGDEYGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYAAQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKEYVSGKEQGMPAFGRAPQDGGTTDMSDERLAHILSESGHLQMSRSEHETSNDADSKSPSRLGCPSPFGKDRMDSQNRRLKKYENDDIPQEKVLRIYQEELAKMMGRRVDDIRGPRDFPPSAMFPHFFSGGQGLQSIERTQEDIRMALDAYHRELQKLNVAPGQNAALAAALPGLPNIPGLLALQQHALQQHHMATAANGGVVQDLSLGKIDPRSGKIMNGVTDDDKDKMEEAMRHAGSAFSLVRPKQEPSGPQSTPGGSSASSPLGNSILPPAMTPNEEFPGAAAASPLQRMASITNSLISQPSTPTHHSTSQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAVAQHQQESQLQLGPPQPSPQHPSHGQQPSPLMLTPPGPHHPLGQLSIQDLQKKQQQAQQAQQQQQAQQQHQQQHQQQQQHQMGLHSPHHQMAPSPLRNLHQHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQMWLVDPHNVDRLQALKNERREANKRRRSSAPGHDNSSDTSSNDTAEFYHASSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEQQSPREPGQPFDPVQFRLLLNQRLLEIHKERLGIGNVPIPYGPYFNPNIASLVSNALKEQCSGLDLSMGTLKREPNQEFEDDDGDDGMSNLGSEDSEGSGGSMKRGGDTTDLGQQPSQPTTARSNRRKPAAPQWVNPEWQEPPRTGDEVIINGVCVMQTDDYGVKRENEETVRVEPTPVQDRYDEDATSDASSVVSTNNPQERESPLPSLKSPPRNTPSTSPRPPSSSQQQQTQQLTTDEDIPTKDIVKNEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01100478;
90% Identity
iTF_01103433;
80% Identity
iTF_01100478;