Ocos021374.1
Basic Information
- Insect
- Ophion costatus
- Gene Symbol
- kn
- Assembly
- GCA_951751655.1
- Location
- OX632366.1:1481758-1537912[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5e-40 4.4e-36 124.9 0.0 39 118 208 287 199 292 0.95 2 3 1.2e-05 0.11 11.3 0.0 114 136 333 355 323 361 0.84 3 3 4.2e-34 3.7e-30 105.3 1.8 134 182 467 515 461 519 0.95
Sequence Information
- Coding Sequence
- ATGCTCATAGCAGGCTTGCTACGTCTGTGCATAGACCAGCAAAAGCTCGAGCACCCCTCGGATCGAGGCACCCCACCCAGGGAAAGGGGCCCTCGCGCCCTTTCCGAACAGCCCATGAATCGAGCCACTCGAGTGGAAAGCAGACGGAAGCTGCGCGTGTTTTCGTTCGAGGCGATCAATATCGAGGTCGATAGATGCTCGACCTTGAGAACGGAGACTGGTAGCCGTGAAACAATAGTGGGAGACTACTCGCGGGAATCGGTTTGCTGGTGGCAGCAGCGGCCCGAAGGACGAAGCCTGTTGCCCCAGGAGGGCCCTTACGGCCTCACCACGCGTTCCGACGAGTGGAGCGGTCTCCTGCCCAGCTCCACTATAGTGGGTGCTGGGGGGTCACCATGGCTGGGACTTGGCGCCGGCGGTGGAACCGGTGCCACCGGTGGTGGCGGCAGTCCCGTCGAACTCGAGGGACACTGGGGACGAAAGTTGTATAGCGCGGGCGTTGCACCACCACCGCCCCCGCCTCACCATCATCCCCGGGCGCCGCTTGTTTTTGCGCCCCAGGACATGCGACAGATCCTCAAGGAGGAACCGGTCCCACGTGCCTGGCCGCAACCGGCGCTTGCTGACAATGCATCAGTTGGAATCGGCAAGGCACACTTTGAGAAACAACCGCCGGGCAATTTGAGGAAGAGCAATTTCTTTCACTTCGTGATCGCCCTTTACGACAGGGTCGGTCAACCGATCGAGATCGAGAGAACAGCCTTCATCGGTTTCGTGGAGAAGGATCAAGAATCCGAGGGTCAAAAAACCAACAACGGAATTCAGTACAGGCTCCAGCTGCTCTACGCCAATGGGATGAAACGAGGATGGGCCGAGGAGGGTTGGAAGCTCGTTTTTCTCCCGCGGGAATTTTCGGCCACGTTGAAGGCGTCGAGGCAAGTTGTACCGATACTCACTTACCTGGCTCTCATCGTGGTCTTCTTGCGTTCGTATCGCaacctatgCCTGAGGCAAGAACAGGACATTTTCGTGAGGCTCATTGACTCCTCCACCAAACAGAACTTGTCAGAAAGCCAGTGGCTCGGCAGCCACATATCCAAGTACTTCAGGGGGTCGAAGGATAATATCGCCAAAAGTGTTTGTCTGCGCTCCTTGTGGGACTCTGAGAAAACGAAGGAAGGCCCCCGTGGGGCCAGTGCTGACTGGTCGCACCCTCAGGACGCTCTCCTCTCGTCTCCCTCCCGAGTGGCCCCGACCTCCGCGATTACCGTCGTCGACGCCGGTGACGACGACAACAAGCCCGTAACGCGCGCTTCCGGTGACCCTCGACGGCGACCCTCGGAGTTCTCGGCATCTCCTCCGAGACCCACAACGGGCATAACAATCGACCGATATCCATCGGCGATAATGTACGAGGGTCAGGACAAGAATCCGGAAATGTGCCGAGTCCTCTTGACCCACGAAGTCATGTGCAGTCGATGCTGTGACAAGAAGAGCTGCGGTAATCGGAACGAAACCCCGAGCGATCCCGTCATCATCGATCGCGAGGCTATAATCGAGGATTCCCACTTGCCTACGATTACACTAAAGTCCAAGAGTATACGTGGATAG
- Protein Sequence
- MLIAGLLRLCIDQQKLEHPSDRGTPPRERGPRALSEQPMNRATRVESRRKLRVFSFEAINIEVDRCSTLRTETGSRETIVGDYSRESVCWWQQRPEGRSLLPQEGPYGLTTRSDEWSGLLPSSTIVGAGGSPWLGLGAGGGTGATGGGGSPVELEGHWGRKLYSAGVAPPPPPPHHHPRAPLVFAPQDMRQILKEEPVPRAWPQPALADNASVGIGKAHFEKQPPGNLRKSNFFHFVIALYDRVGQPIEIERTAFIGFVEKDQESEGQKTNNGIQYRLQLLYANGMKRGWAEEGWKLVFLPREFSATLKASRQVVPILTYLALIVVFLRSYRNLCLRQEQDIFVRLIDSSTKQNLSESQWLGSHISKYFRGSKDNIAKSVCLRSLWDSEKTKEGPRGASADWSHPQDALLSSPSRVAPTSAITVVDAGDDDNKPVTRASGDPRRRPSEFSASPPRPTTGITIDRYPSAIMYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDREAIIEDSHLPTITLKSKSIRG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -