Obrm012902.1
Basic Information
- Insect
- Operophtera brumata
- Gene Symbol
- pnr
- Assembly
- GCA_001266575.1
- Location
- JTDY01005774.1:43682-47461[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-18 1e-14 53.8 3.7 1 35 25 58 25 59 0.98 2 2 0.42 1.2e+03 -0.9 0.1 10 14 173 177 173 182 0.87
Sequence Information
- Coding Sequence
- ATGGAGCAGGAGCCGCTGGACGCGTCGCCAACggcgggcggcgcgcgcgcCGGGCCGCGCGTGGAGATCGCGTGCACGAACTGCGGCACGCACACCACCACCATCTGGCGGCGCGACGCGCGCGGCGAGATGGTGTGCAACGCGTGCGGGCTGTACTACAAGCTGCACGGCGTGCCGCGCCCCACCGCCATGCGGCGCGACACCATCCAcacgcgccgccgccgcccgcgGCACGACGCCAAGCATTCCAGGAACAAAAACCGTCGGAGTGGCGGCCCTTGTCCCGAACCGAGCGAGGTGCAGACATCAGGAGGGAACAGCGGCGCCAGCATGCCGCCCGCGTGCGGCGAGGGCGCCGCGCCCGAGGAGGCAGTGCTGGCGGCGCTGCGCCGGCAGCTGCAGCCGCATCTACTGGCCGCGCTGCACGCGCACACCGCGCGCACGCACCGCCCGCAGGTAACTGTTAGTGAGGCGCAGGCGCCAGCATGCCGCCCGCGTGCGCCGCGCCCGAGGAGGCCGTGCTGGCGGCGCTGCGCCGGCAGCATGCTGCCCACGAAGCAAGTATTCGTTTAG
- Protein Sequence
- MEQEPLDASPTAGGARAGPRVEIACTNCGTHTTTIWRRDARGEMVCNACGLYYKLHGVPRPTAMRRDTIHTRRRRPRHDAKHSRNKNRRSGGPCPEPSEVQTSGGNSGASMPPACGEGAAPEEAVLAALRRQLQPHLLAALHAHTARTHRPQVTVSEAQAPACRPRAPRPRRPCWRRCAGSMLPTKQVFV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00704612;
- 90% Identity
- -
- 80% Identity
- -